RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
SPG7-209ENST00000564047 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.48
SPG7-209ENST00000564047 TESK2Q96S53 571 aa18.07■□□□□ 0.48
SPG7-209ENST00000564047 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
SPG7-209ENST00000564047 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
SPG7-209ENST00000564047 KCNA6P17658 529 aa18.05■□□□□ 0.48
SPG7-209ENST00000564047 PRAM1Q96QH2 718 aa18.05■□□□□ 0.48
SPG7-209ENST00000564047 ARHGEF28Q8N1W1 1705 aaKnown RBP18.05■□□□□ 0.48
SPG7-209ENST00000564047 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
SPG7-209ENST00000564047 POGKQ9P215 609 aa18.04■□□□□ 0.48
SPG7-209ENST00000564047 SRCAPQ6ZRS2 3230 aa18.04■□□□□ 0.48
SPG7-209ENST00000564047 TMEM94Q12767 1356 aa18.04■□□□□ 0.48
SPG7-209ENST00000564047 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
SPG7-209ENST00000564047 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
SPG7-209ENST00000564047 TMF1P82094 1093 aa18.02■□□□□ 0.48
SPG7-209ENST00000564047 NWD1Q149M9 1564 aa18.01■□□□□ 0.47
SPG7-209ENST00000564047 CHD2O14647 1828 aaKnown RBP18.01■□□□□ 0.47
SPG7-209ENST00000564047 WAPLQ7Z5K2 1190 aa18.01■□□□□ 0.47
SPG7-209ENST00000564047 PLEKHH1Q9ULM0 1364 aa18.01■□□□□ 0.47
SPG7-209ENST00000564047 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
SPG7-209ENST00000564047 C11orf95C9JLR9 678 aaPredicted RBP17.99■□□□□ 0.47
SPG7-209ENST00000564047 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
SPG7-209ENST00000564047 JCADQ9P266 1359 aa17.99■□□□□ 0.47
SPG7-209ENST00000564047 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
SPG7-209ENST00000564047 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
SPG7-209ENST00000564047 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
SPG7-209ENST00000564047 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
SPG7-209ENST00000564047 CCDC7Q96M83 1385 aa17.97■□□□□ 0.47
SPG7-209ENST00000564047 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
SPG7-209ENST00000564047 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.47
SPG7-209ENST00000564047 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
SPG7-209ENST00000564047 MSH6P52701 1360 aa17.96■□□□□ 0.47
SPG7-209ENST00000564047 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
SPG7-209ENST00000564047 MINK1Q8N4C8 1332 aaPredicted RBP17.96■□□□□ 0.46
SPG7-209ENST00000564047 PUS7Q96PZ0 661 aaKnown RBP17.95■□□□□ 0.46
SPG7-209ENST00000564047 ZNF772Q68DY9 489 aaPredicted RBP17.94■□□□□ 0.46
SPG7-209ENST00000564047 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
SPG7-209ENST00000564047 SLAIN2Q9P270 581 aa17.93■□□□□ 0.46
SPG7-209ENST00000564047 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
SPG7-209ENST00000564047 MEX3CQ5U5Q3 659 aaKnown RBP17.92■□□□□ 0.46
SPG7-209ENST00000564047 NCOA3Q9Y6Q9 1424 aa17.91■□□□□ 0.46
SPG7-209ENST00000564047 ADGRB2O60241 1585 aa17.91■□□□□ 0.46
SPG7-209ENST00000564047 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.9■□□□□ 0.46
SPG7-209ENST00000564047 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
SPG7-209ENST00000564047 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
SPG7-209ENST00000564047 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
SPG7-209ENST00000564047 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
SPG7-209ENST00000564047 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
SPG7-209ENST00000564047 ADGRL3Q9HAR2 1447 aa17.88■□□□□ 0.45
SPG7-209ENST00000564047 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
SPG7-209ENST00000564047 CABP2Q9NPB3 220 aa17.87■□□□□ 0.45
SPG7-209ENST00000564047 ATAD2Q6PL18 1390 aa17.86■□□□□ 0.45
SPG7-209ENST00000564047 LRP6O75581 1613 aa17.86■□□□□ 0.45
SPG7-209ENST00000564047 RXRBP28702 533 aa17.85■□□□□ 0.45
SPG7-209ENST00000564047 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
SPG7-209ENST00000564047 C14orf37Q86TY3 774 aa17.84■□□□□ 0.45
SPG7-209ENST00000564047 SHPRHQ149N8 1683 aa17.83■□□□□ 0.45
SPG7-209ENST00000564047 CDC42BPGQ6DT37 1551 aa17.83■□□□□ 0.45
SPG7-209ENST00000564047 C19orf44Q9H6X5 657 aa17.83■□□□□ 0.44
SPG7-209ENST00000564047 NINLQ9Y2I6 1382 aa17.82■□□□□ 0.44
SPG7-209ENST00000564047 NALCNQ8IZF0 1738 aa17.82■□□□□ 0.44
SPG7-209ENST00000564047 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
SPG7-209ENST00000564047 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
SPG7-209ENST00000564047 DCCP43146 1447 aa17.81■□□□□ 0.44
SPG7-209ENST00000564047 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
SPG7-209ENST00000564047 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
SPG7-209ENST00000564047 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
SPG7-209ENST00000564047 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
SPG7-209ENST00000564047 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
SPG7-209ENST00000564047 ATP7BP35670 1465 aa17.79■□□□□ 0.44
SPG7-209ENST00000564047 SLC12A5Q9H2X9 1139 aa17.78■□□□□ 0.44
SPG7-209ENST00000564047 MYOM1P52179 1685 aa17.77■□□□□ 0.44
SPG7-209ENST00000564047 CADPS2Q86UW7 1296 aa17.77■□□□□ 0.44
SPG7-209ENST00000564047 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.44
SPG7-209ENST00000564047 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
SPG7-209ENST00000564047 ATF3P18847 181 aa17.76■□□□□ 0.43
SPG7-209ENST00000564047 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
SPG7-209ENST00000564047 PANK3Q9H999 370 aa17.76■□□□□ 0.43
SPG7-209ENST00000564047 CABP1Q9NZU7 370 aa17.76■□□□□ 0.43
SPG7-209ENST00000564047 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
SPG7-209ENST00000564047 USP32Q8NFA0 1604 aa17.74■□□□□ 0.43
SPG7-209ENST00000564047 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
SPG7-209ENST00000564047 NUTM2BA6NNL0 878 aaPredicted RBP17.74■□□□□ 0.43
SPG7-209ENST00000564047 NUTM2EB1AL46 878 aaPredicted RBP17.74■□□□□ 0.43
SPG7-209ENST00000564047 NUTM2AQ8IVF1 878 aaPredicted RBP17.74■□□□□ 0.43
SPG7-209ENST00000564047 TERF2IPQ9NYB0 399 aa17.74■□□□□ 0.43
SPG7-209ENST00000564047 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
SPG7-209ENST00000564047 AFF2P51816 1311 aa17.72■□□□□ 0.43
SPG7-209ENST00000564047 TOPAZ1Q8N9V7 1692 aa17.72■□□□□ 0.43
SPG7-209ENST00000564047 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
SPG7-209ENST00000564047 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
SPG7-209ENST00000564047 MST1RQ04912 1400 aa17.72■□□□□ 0.43
SPG7-209ENST00000564047 CD163L1Q9NR16 1453 aa17.71■□□□□ 0.43
SPG7-209ENST00000564047 C1orf167Q5SNV9 1468 aa17.7■□□□□ 0.42
SPG7-209ENST00000564047 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
SPG7-209ENST00000564047 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
SPG7-209ENST00000564047 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
SPG7-209ENST00000564047 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
SPG7-209ENST00000564047 CARD14Q9BXL6 1004 aa17.69■□□□□ 0.42
SPG7-209ENST00000564047 POLR3AO14802 1390 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms