RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
CLN6-203ENST00000563917 ADAMTS2O95450 1211 aa14.06□□□□□ -0.16
CLN6-203ENST00000563917 TMEM132EQ6IEE7 984 aa14.06□□□□□ -0.16
CLN6-203ENST00000563917 SOS2Q07890 1332 aaPredicted RBP14.06□□□□□ -0.16
CLN6-203ENST00000563917 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
CLN6-203ENST00000563917 ABCC11Q96J66 1382 aa14.05□□□□□ -0.16
CLN6-203ENST00000563917 CDC42BPGQ6DT37 1551 aa14.05□□□□□ -0.16
CLN6-203ENST00000563917 NUTM2FA1L443 756 aa14.04□□□□□ -0.16
CLN6-203ENST00000563917 QTRT2Q9H974 415 aaKnown RBP14.04□□□□□ -0.16
CLN6-203ENST00000563917 DHX57Q6P158 1386 aaKnown RBP14.04□□□□□ -0.16
CLN6-203ENST00000563917 TECPR2O15040 1411 aa14.04□□□□□ -0.16
CLN6-203ENST00000563917 PIK3C2GO75747 1445 aa14.04□□□□□ -0.16
CLN6-203ENST00000563917 RBM6P78332 1123 aaKnown RBP14.03□□□□□ -0.16
CLN6-203ENST00000563917 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
CLN6-203ENST00000563917 IFT172Q9UG01 1749 aa14.03□□□□□ -0.16
CLN6-203ENST00000563917 YTHDC2Q9H6S0 1430 aaKnown RBP14.02□□□□□ -0.16
CLN6-203ENST00000563917 FOXO3O43524 673 aa14.02□□□□□ -0.17
CLN6-203ENST00000563917 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
CLN6-203ENST00000563917 LAMC1P11047 1609 aa14.01□□□□□ -0.17
CLN6-203ENST00000563917 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
CLN6-203ENST00000563917 SIRT1Q96EB6 747 aa14.01□□□□□ -0.17
CLN6-203ENST00000563917 POGKQ9P215 609 aa14□□□□□ -0.17
CLN6-203ENST00000563917 USP21Q9UK80 565 aa14□□□□□ -0.17
CLN6-203ENST00000563917 KNDC1Q76NI1 1749 aa14□□□□□ -0.17
CLN6-203ENST00000563917 MYOM2P54296 1465 aa13.99□□□□□ -0.17
CLN6-203ENST00000563917 CFAP70Q5T0N1 1121 aa13.99□□□□□ -0.17
CLN6-203ENST00000563917 TRPC5Q9UL62 973 aaPredicted RBP13.99□□□□□ -0.17
CLN6-203ENST00000563917 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
CLN6-203ENST00000563917 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
CLN6-203ENST00000563917 PSME1Q06323 249 aa13.98□□□□□ -0.17
CLN6-203ENST00000563917 UPF1Q92900 1129 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLN6-203ENST00000563917 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
CLN6-203ENST00000563917 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLN6-203ENST00000563917 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
CLN6-203ENST00000563917 KDM2AQ9Y2K7 1162 aa13.97□□□□□ -0.17
CLN6-203ENST00000563917 HRCP23327 699 aa13.96□□□□□ -0.17
CLN6-203ENST00000563917 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.17
CLN6-203ENST00000563917 PRAM1Q96QH2 718 aa13.96□□□□□ -0.17
CLN6-203ENST00000563917 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
CLN6-203ENST00000563917 PXDNQ92626 1479 aa13.95□□□□□ -0.18
CLN6-203ENST00000563917 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
CLN6-203ENST00000563917 KRT28Q7Z3Y7 464 aa13.95□□□□□ -0.18
CLN6-203ENST00000563917 FNBP4Q8N3X1 1017 aaPredicted RBP13.95□□□□□ -0.18
CLN6-203ENST00000563917 PHF8Q9UPP1 1060 aa13.95□□□□□ -0.18
CLN6-203ENST00000563917 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
CLN6-203ENST00000563917 FMN2Q9NZ56 1722 aa13.94□□□□□ -0.18
CLN6-203ENST00000563917 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
CLN6-203ENST00000563917 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
CLN6-203ENST00000563917 SPATA31A3Q5VYP0 1347 aa13.92□□□□□ -0.18
CLN6-203ENST00000563917 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
CLN6-203ENST00000563917 RGS12O14924 1447 aa13.91□□□□□ -0.18
CLN6-203ENST00000563917 ATAD2Q6PL18 1390 aa13.91□□□□□ -0.18
CLN6-203ENST00000563917 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
CLN6-203ENST00000563917 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
CLN6-203ENST00000563917 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
CLN6-203ENST00000563917 ATRNO75882 1429 aa13.89□□□□□ -0.19
CLN6-203ENST00000563917 TNS3Q68CZ2 1445 aa13.89□□□□□ -0.19
CLN6-203ENST00000563917 ANKARQ7Z5J8 1434 aa13.89□□□□□ -0.19
CLN6-203ENST00000563917 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
CLN6-203ENST00000563917 PMFBP1Q8TBY8 1022 aa13.88□□□□□ -0.19
CLN6-203ENST00000563917 GJD4Q96KN9 370 aaPredicted RBP13.88□□□□□ -0.19
CLN6-203ENST00000563917 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
CLN6-203ENST00000563917 MINK1Q8N4C8 1332 aaPredicted RBP13.88□□□□□ -0.19
CLN6-203ENST00000563917 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
CLN6-203ENST00000563917 SBNO1A3KN83 1393 aa13.87□□□□□ -0.19
CLN6-203ENST00000563917 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
CLN6-203ENST00000563917 NGDNQ8NEJ9 315 aaKnown RBP13.86□□□□□ -0.19
CLN6-203ENST00000563917 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
CLN6-203ENST00000563917 RGPD8O14715 1765 aaPredicted RBP13.86□□□□□ -0.19
CLN6-203ENST00000563917 ADGRB1O14514 1584 aa13.85□□□□□ -0.19
CLN6-203ENST00000563917 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
CLN6-203ENST00000563917 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
CLN6-203ENST00000563917 CABLES1Q8TDN4 633 aa13.84□□□□□ -0.19
CLN6-203ENST00000563917 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
CLN6-203ENST00000563917 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
CLN6-203ENST00000563917 CCDC125Q86Z20 511 aa13.83□□□□□ -0.2
CLN6-203ENST00000563917 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
CLN6-203ENST00000563917 SLIT2O94813 1529 aa13.81□□□□□ -0.2
CLN6-203ENST00000563917 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
CLN6-203ENST00000563917 A0A0G2JS52 829 aa13.81□□□□□ -0.2
CLN6-203ENST00000563917 MYT1Q01538 1121 aa13.81□□□□□ -0.2
CLN6-203ENST00000563917 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
CLN6-203ENST00000563917 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
CLN6-203ENST00000563917 VPS72Q15906 364 aa13.8□□□□□ -0.2
CLN6-203ENST00000563917 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
CLN6-203ENST00000563917 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
CLN6-203ENST00000563917 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
CLN6-203ENST00000563917 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
CLN6-203ENST00000563917 ITSN1Q15811 1721 aa13.77□□□□□ -0.21
CLN6-203ENST00000563917 SEPT12Q8IYM1 358 aa13.77□□□□□ -0.21
CLN6-203ENST00000563917 CDK19Q9BWU1 502 aa13.77□□□□□ -0.21
CLN6-203ENST00000563917 NWD2Q9ULI1 1742 aa13.77□□□□□ -0.21
CLN6-203ENST00000563917 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
CLN6-203ENST00000563917 FAM83GA6ND36 823 aa13.76□□□□□ -0.21
CLN6-203ENST00000563917 PRDM11Q9NQV5 511 aa13.76□□□□□ -0.21
CLN6-203ENST00000563917 BTG4Q9NY30 223 aa13.76□□□□□ -0.21
CLN6-203ENST00000563917 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
CLN6-203ENST00000563917 PLCH1Q4KWH8 1693 aa13.75□□□□□ -0.21
CLN6-203ENST00000563917 KIAA1210Q9ULL0 1709 aa13.74□□□□□ -0.21
CLN6-203ENST00000563917 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms