RNA–Protein interactions for RNA: ENST00000563767.1

FANCA-214, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-214ENST00000563767 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
FANCA-214ENST00000563767 MSH6P52701 1360 aa18.78■□□□□ 0.6
FANCA-214ENST00000563767 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.6
FANCA-214ENST00000563767 NBPF1Q3BBV0 1214 aa18.77■□□□□ 0.6
FANCA-214ENST00000563767 TRPM1Q7Z4N2 1603 aa18.76■□□□□ 0.59
FANCA-214ENST00000563767 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
FANCA-214ENST00000563767 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
FANCA-214ENST00000563767 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
FANCA-214ENST00000563767 SIRT1Q96EB6 747 aa18.73■□□□□ 0.59
FANCA-214ENST00000563767 NALCNQ8IZF0 1738 aa18.73■□□□□ 0.59
FANCA-214ENST00000563767 C14orf37Q86TY3 774 aa18.72■□□□□ 0.59
FANCA-214ENST00000563767 C19orf44Q9H6X5 657 aa18.72■□□□□ 0.59
FANCA-214ENST00000563767 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
FANCA-214ENST00000563767 DLC1Q96QB1 1528 aa18.72■□□□□ 0.59
FANCA-214ENST00000563767 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
FANCA-214ENST00000563767 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
FANCA-214ENST00000563767 ADGRL3Q9HAR2 1447 aa18.7■□□□□ 0.58
FANCA-214ENST00000563767 PRAM1Q96QH2 718 aa18.68■□□□□ 0.58
FANCA-214ENST00000563767 LRP6O75581 1613 aa18.67■□□□□ 0.58
FANCA-214ENST00000563767 PHLPP1O60346 1717 aa18.66■□□□□ 0.58
FANCA-214ENST00000563767 NUTM2BA6NNL0 878 aaPredicted RBP18.66■□□□□ 0.58
FANCA-214ENST00000563767 NUTM2EB1AL46 878 aaPredicted RBP18.66■□□□□ 0.58
FANCA-214ENST00000563767 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
FANCA-214ENST00000563767 ROCK2O75116 1388 aaKnown RBP18.66■□□□□ 0.58
FANCA-214ENST00000563767 GPRASP1Q5JY77 1395 aa18.66■□□□□ 0.58
FANCA-214ENST00000563767 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
FANCA-214ENST00000563767 ATF3P18847 181 aa18.65■□□□□ 0.58
FANCA-214ENST00000563767 SAFB2Q14151 953 aaKnown RBP eCLIP18.65■□□□□ 0.58
FANCA-214ENST00000563767 CADPS2Q86UW7 1296 aa18.65■□□□□ 0.58
FANCA-214ENST00000563767 POGKQ9P215 609 aa18.65■□□□□ 0.58
FANCA-214ENST00000563767 DCCP43146 1447 aa18.65■□□□□ 0.58
FANCA-214ENST00000563767 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
FANCA-214ENST00000563767 ZRANB1Q9UGI0 708 aa18.62■□□□□ 0.57
FANCA-214ENST00000563767 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
FANCA-214ENST00000563767 MST1RQ04912 1400 aa18.61■□□□□ 0.57
FANCA-214ENST00000563767 AFF2P51816 1311 aa18.61■□□□□ 0.57
FANCA-214ENST00000563767 QTRT2Q9H974 415 aaKnown RBP18.6■□□□□ 0.57
FANCA-214ENST00000563767 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
FANCA-214ENST00000563767 RBM6P78332 1123 aaKnown RBP18.59■□□□□ 0.57
FANCA-214ENST00000563767 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
FANCA-214ENST00000563767 FMN2Q9NZ56 1722 aa18.59■□□□□ 0.57
FANCA-214ENST00000563767 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
FANCA-214ENST00000563767 ADGRB2O60241 1585 aa18.58■□□□□ 0.56
FANCA-214ENST00000563767 RGPD8O14715 1765 aaPredicted RBP18.58■□□□□ 0.56
FANCA-214ENST00000563767 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
FANCA-214ENST00000563767 C1orf167Q5SNV9 1468 aa18.57■□□□□ 0.56
FANCA-214ENST00000563767 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
FANCA-214ENST00000563767 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
FANCA-214ENST00000563767 NGLY1Q96IV0 654 aa18.55■□□□□ 0.56
FANCA-214ENST00000563767 C8orf37Q96NL8 207 aa18.55■□□□□ 0.56
FANCA-214ENST00000563767 NUTM2FA1L443 756 aa18.54■□□□□ 0.56
FANCA-214ENST00000563767 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
FANCA-214ENST00000563767 WASLO00401 505 aaPredicted RBP18.52■□□□□ 0.56
FANCA-214ENST00000563767 ORAI2Q96SN7 254 aa18.52■□□□□ 0.56
FANCA-214ENST00000563767 USP32Q8NFA0 1604 aa18.52■□□□□ 0.55
FANCA-214ENST00000563767 RGS12O14924 1447 aa18.51■□□□□ 0.55
FANCA-214ENST00000563767 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
FANCA-214ENST00000563767 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
FANCA-214ENST00000563767 LRRC59Q96AG4 307 aaKnown RBP18.5■□□□□ 0.55
FANCA-214ENST00000563767 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
FANCA-214ENST00000563767 AHDC1Q5TGY3 1603 aaPredicted RBP18.49■□□□□ 0.55
FANCA-214ENST00000563767 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
FANCA-214ENST00000563767 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
FANCA-214ENST00000563767 NHSL1Q5SYE7 1610 aa18.48■□□□□ 0.55
FANCA-214ENST00000563767 TULP4Q9NRJ4 1543 aa18.48■□□□□ 0.55
FANCA-214ENST00000563767 ANKARQ7Z5J8 1434 aa18.47■□□□□ 0.55
FANCA-214ENST00000563767 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
FANCA-214ENST00000563767 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
FANCA-214ENST00000563767 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
FANCA-214ENST00000563767 USP47Q96K76 1375 aa18.45■□□□□ 0.54
FANCA-214ENST00000563767 NUDT16Q96DE0 195 aaKnown RBP18.45■□□□□ 0.54
FANCA-214ENST00000563767 SBNO2Q9Y2G9 1366 aa18.44■□□□□ 0.54
FANCA-214ENST00000563767 CCDC125Q86Z20 511 aa18.44■□□□□ 0.54
FANCA-214ENST00000563767 ATP7BP35670 1465 aa18.44■□□□□ 0.54
FANCA-214ENST00000563767 TESK2Q96S53 571 aa18.43■□□□□ 0.54
FANCA-214ENST00000563767 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
FANCA-214ENST00000563767 KIF1AQ12756 1690 aa18.43■□□□□ 0.54
FANCA-214ENST00000563767 EVC2Q86UK5 1308 aa18.43■□□□□ 0.54
FANCA-214ENST00000563767 ADAMTS2O95450 1211 aa18.42■□□□□ 0.54
FANCA-214ENST00000563767 PHF8Q9UPP1 1060 aa18.42■□□□□ 0.54
FANCA-214ENST00000563767 ITSN1Q15811 1721 aa18.42■□□□□ 0.54
FANCA-214ENST00000563767 TOPAZ1Q8N9V7 1692 aa18.41■□□□□ 0.54
FANCA-214ENST00000563767 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
FANCA-214ENST00000563767 FOXO3O43524 673 aa18.4■□□□□ 0.54
FANCA-214ENST00000563767 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
FANCA-214ENST00000563767 USP21Q9UK80 565 aa18.4■□□□□ 0.54
FANCA-214ENST00000563767 TRPC5Q9UL62 973 aaPredicted RBP18.4■□□□□ 0.54
FANCA-214ENST00000563767 CCDC61Q9Y6R9 512 aa18.39■□□□□ 0.53
FANCA-214ENST00000563767 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
FANCA-214ENST00000563767 NPHP3Q7Z494 1330 aa18.38■□□□□ 0.53
FANCA-214ENST00000563767 XPCQ01831 940 aaPredicted RBP18.37■□□□□ 0.53
FANCA-214ENST00000563767 PXDNQ92626 1479 aa18.37■□□□□ 0.53
FANCA-214ENST00000563767 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
FANCA-214ENST00000563767 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.53
FANCA-214ENST00000563767 PNPLA6Q8IY17 1366 aa18.35■□□□□ 0.53
FANCA-214ENST00000563767 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
FANCA-214ENST00000563767 KRT28Q7Z3Y7 464 aa18.35■□□□□ 0.53
FANCA-214ENST00000563767 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
FANCA-214ENST00000563767 ACEP12821 1306 aa18.33■□□□□ 0.53
FANCA-214ENST00000563767 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms