RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SIRT1Q96EB6 747 aa30.18■■■□□ 2.42
LINC01960-201ENST00000563759 ROBO2Q9HCK4 1378 aa30.17■■■□□ 2.42
LINC01960-201ENST00000563759 PTCH1Q13635 1447 aa30.16■■■□□ 2.42
LINC01960-201ENST00000563759 NCKAP5LQ9HCH0 1330 aa30.15■■■□□ 2.42
LINC01960-201ENST00000563759 AMOTL2Q9Y2J4 779 aa30.15■■■□□ 2.42
LINC01960-201ENST00000563759 LMTK3Q96Q04 1460 aa30.15■■■□□ 2.42
LINC01960-201ENST00000563759 PANK3Q9H999 370 aa30.14■■■□□ 2.42
LINC01960-201ENST00000563759 SRPK2P78362 688 aaKnown RBP30.12■■■□□ 2.41
LINC01960-201ENST00000563759 PUS7Q96PZ0 661 aaKnown RBP30.12■■■□□ 2.41
LINC01960-201ENST00000563759 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.11■■■□□ 2.41
LINC01960-201ENST00000563759 ADGRB2O60241 1585 aa30.11■■■□□ 2.41
LINC01960-201ENST00000563759 CABP2Q9NPB3 220 aa30.1■■■□□ 2.41
LINC01960-201ENST00000563759 ATAD2Q6PL18 1390 aa30.08■■■□□ 2.41
LINC01960-201ENST00000563759 HSPA2P54652 639 aa30.08■■■□□ 2.41
LINC01960-201ENST00000563759 TMC1Q8TDI8 760 aa30.08■■■□□ 2.41
LINC01960-201ENST00000563759 PRKRIP1Q9H875 184 aaPredicted RBP30.08■■■□□ 2.41
LINC01960-201ENST00000563759 CNGB1Q14028 1251 aaPredicted RBP30.06■■■□□ 2.4
LINC01960-201ENST00000563759 CDK19Q9BWU1 502 aa30.06■■■□□ 2.4
LINC01960-201ENST00000563759 PER1O15534 1290 aaPredicted RBP30.04■■■□□ 2.4
LINC01960-201ENST00000563759 KCNA6P17658 529 aa30.04■■■□□ 2.4
LINC01960-201ENST00000563759 NINLQ9Y2I6 1382 aa30.04■■■□□ 2.4
LINC01960-201ENST00000563759 CCER2I3L3R5 266 aa30.02■■■□□ 2.4
LINC01960-201ENST00000563759 NWD1Q149M9 1564 aa30.02■■■□□ 2.4
LINC01960-201ENST00000563759 STRCQ7RTU9 1775 aa30.02■■■□□ 2.4
LINC01960-201ENST00000563759 WASLO00401 505 aaPredicted RBP30.01■■■□□ 2.39
LINC01960-201ENST00000563759 KNSTRNQ9Y448 316 aa30.01■■■□□ 2.39
LINC01960-201ENST00000563759 SLC12A5Q9H2X9 1139 aa30■■■□□ 2.39
LINC01960-201ENST00000563759 KTN1Q86UP2 1357 aaKnown RBP30■■■□□ 2.39
LINC01960-201ENST00000563759 NALCNQ8IZF0 1738 aa29.97■■■□□ 2.39
LINC01960-201ENST00000563759 ANKRD36BQ8N2N9 1353 aa29.96■■■□□ 2.39
LINC01960-201ENST00000563759 USP32Q8NFA0 1604 aa29.94■■■□□ 2.38
LINC01960-201ENST00000563759 TOPAZ1Q8N9V7 1692 aa29.93■■■□□ 2.38
LINC01960-201ENST00000563759 NSD3Q9BZ95 1437 aa29.93■■■□□ 2.38
LINC01960-201ENST00000563759 CC2D1BQ5T0F9 858 aaKnown RBP29.93■■■□□ 2.38
LINC01960-201ENST00000563759 ITSN1Q15811 1721 aa29.93■■■□□ 2.38
LINC01960-201ENST00000563759 ATP7BP35670 1465 aa29.92■■■□□ 2.38
LINC01960-201ENST00000563759 RALBP1Q15311 655 aa29.91■■■□□ 2.38
LINC01960-201ENST00000563759 PARD3Q8TEW0 1356 aa29.91■■■□□ 2.38
LINC01960-201ENST00000563759 A0A1W2PP64 1363 aa29.9■■■□□ 2.38
LINC01960-201ENST00000563759 CARD14Q9BXL6 1004 aa29.9■■■□□ 2.38
LINC01960-201ENST00000563759 PPIP5K1Q6PFW1 1433 aa29.89■■■□□ 2.38
LINC01960-201ENST00000563759 NKTRP30414 1462 aaKnown RBP29.89■■■□□ 2.38
LINC01960-201ENST00000563759 AMER1Q5JTC6 1135 aaPredicted RBP29.89■■■□□ 2.37
LINC01960-201ENST00000563759 FMN2Q9NZ56 1722 aa29.89■■■□□ 2.37
LINC01960-201ENST00000563759 STRCP1A6NGW2 1772 aa29.88■■■□□ 2.37
LINC01960-201ENST00000563759 RGPD8O14715 1765 aaPredicted RBP29.88■■■□□ 2.37
LINC01960-201ENST00000563759 CDC42BPGQ6DT37 1551 aa29.88■■■□□ 2.37
LINC01960-201ENST00000563759 TERF2IPQ9NYB0 399 aa29.88■■■□□ 2.37
LINC01960-201ENST00000563759 NUDT16Q96DE0 195 aaKnown RBP29.87■■■□□ 2.37
LINC01960-201ENST00000563759 CD163L1Q9NR16 1453 aa29.87■■■□□ 2.37
LINC01960-201ENST00000563759 NPC1L1Q9UHC9 1359 aa29.87■■■□□ 2.37
LINC01960-201ENST00000563759 CABP1Q9NZU7 370 aa29.87■■■□□ 2.37
LINC01960-201ENST00000563759 AKAP12Q02952 1782 aa29.85■■■□□ 2.37
LINC01960-201ENST00000563759 MYBBP1AQ9BQG0 1328 aaKnown RBP29.85■■■□□ 2.37
LINC01960-201ENST00000563759 HDGFL2Q7Z4V5 671 aaPredicted RBP29.85■■■□□ 2.37
LINC01960-201ENST00000563759 YTHDC1Q96MU7 727 aaKnown RBP29.85■■■□□ 2.37
LINC01960-201ENST00000563759 CCDC61Q9Y6R9 512 aa29.83■■■□□ 2.37
LINC01960-201ENST00000563759 PRR36Q9H6K5 1346 aa29.83■■■□□ 2.37
LINC01960-201ENST00000563759 ADGRL3Q9HAR2 1447 aa29.83■■■□□ 2.37
LINC01960-201ENST00000563759 MON2Q7Z3U7 1717 aa29.82■■■□□ 2.37
LINC01960-201ENST00000563759 KIF20BQ96Q89 1820 aa29.82■■■□□ 2.37
LINC01960-201ENST00000563759 NUTM2FA1L443 756 aa29.81■■■□□ 2.36
LINC01960-201ENST00000563759 CGNL1Q0VF96 1302 aa29.81■■■□□ 2.36
LINC01960-201ENST00000563759 MRS2Q9HD23 443 aa29.8■■■□□ 2.36
LINC01960-201ENST00000563759 RBM33Q96EV2 1170 aaKnown RBP29.8■■■□□ 2.36
LINC01960-201ENST00000563759 ANKRD26Q9UPS8 1709 aa29.79■■■□□ 2.36
LINC01960-201ENST00000563759 C14orf37Q86TY3 774 aa29.78■■■□□ 2.36
LINC01960-201ENST00000563759 CCDC184Q52MB2 194 aa29.77■■■□□ 2.36
LINC01960-201ENST00000563759 ANKARQ7Z5J8 1434 aa29.77■■■□□ 2.36
LINC01960-201ENST00000563759 PROSER2Q86WR7 435 aaPredicted RBP29.76■■■□□ 2.36
LINC01960-201ENST00000563759 CPSF1Q10570 1443 aaKnown RBP29.76■■■□□ 2.35
LINC01960-201ENST00000563759 NSD2O96028 1365 aa29.75■■■□□ 2.35
LINC01960-201ENST00000563759 BRD4O60885 1362 aaPredicted RBP29.74■■■□□ 2.35
LINC01960-201ENST00000563759 NLRP13Q86W25 1043 aa29.74■■■□□ 2.35
LINC01960-201ENST00000563759 EDC4Q6P2E9 1401 aaKnown RBP29.7■■■□□ 2.35
LINC01960-201ENST00000563759 NRKQ7Z2Y5 1582 aa29.7■■■□□ 2.34
LINC01960-201ENST00000563759 XIRP1Q702N8 1843 aaKnown RBP29.68■■■□□ 2.34
LINC01960-201ENST00000563759 PLEKHG3A1L390 1219 aa29.68■■■□□ 2.34
LINC01960-201ENST00000563759 TMEM94Q12767 1356 aa29.67■■■□□ 2.34
LINC01960-201ENST00000563759 MORC1Q86VD1 984 aa29.67■■■□□ 2.34
LINC01960-201ENST00000563759 ACEP12821 1306 aa29.66■■■□□ 2.34
LINC01960-201ENST00000563759 PPP2R1AP30153 589 aa29.65■■■□□ 2.34
LINC01960-201ENST00000563759 ZNF692Q9BU19 519 aaPredicted RBP29.65■■■□□ 2.34
LINC01960-201ENST00000563759 DMRT2Q9Y5R5 561 aa29.65■■■□□ 2.34
LINC01960-201ENST00000563759 NCOA3Q9Y6Q9 1424 aa29.64■■■□□ 2.34
LINC01960-201ENST00000563759 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.63■■■□□ 2.33
LINC01960-201ENST00000563759 FAM9BQ8IZU0 186 aa29.62■■■□□ 2.33
LINC01960-201ENST00000563759 PMFBP1Q8TBY8 1022 aa29.62■■■□□ 2.33
LINC01960-201ENST00000563759 USP6P35125 1406 aa29.62■■■□□ 2.33
LINC01960-201ENST00000563759 ZNF335Q9H4Z2 1342 aaPredicted RBP29.62■■■□□ 2.33
LINC01960-201ENST00000563759 GGNBP2Q9H3C7 697 aa29.61■■■□□ 2.33
LINC01960-201ENST00000563759 C19orf44Q9H6X5 657 aa29.61■■■□□ 2.33
LINC01960-201ENST00000563759 POLR3AO14802 1390 aaPredicted RBP29.61■■■□□ 2.33
LINC01960-201ENST00000563759 FYB1O15117 783 aa29.61■■■□□ 2.33
LINC01960-201ENST00000563759 NGDNQ8NEJ9 315 aaKnown RBP29.6■■■□□ 2.33
LINC01960-201ENST00000563759 DCCP43146 1447 aa29.59■■■□□ 2.33
LINC01960-201ENST00000563759 TNNT2P45379 298 aaPredicted RBP29.59■■■□□ 2.33
LINC01960-201ENST00000563759 LRRC7Q96NW7 1537 aa29.57■■■□□ 2.32
LINC01960-201ENST00000563759 MSH6P52701 1360 aa29.55■■■□□ 2.32
LINC01960-201ENST00000563759 KIF1AQ12756 1690 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms