RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 FBXO41Q8TF61 875 aa9.02□□□□□ -0.96
CNOT1-204ENST00000563130 STAC3Q96MF2 364 aa9.02□□□□□ -0.96
CNOT1-204ENST00000563130 AMOTL2Q9Y2J4 779 aa9.01□□□□□ -0.97
CNOT1-204ENST00000563130 PRAG1Q86YV5 1406 aa9.01□□□□□ -0.97
CNOT1-204ENST00000563130 XRN1Q8IZH2 1706 aaKnown RBP9.01□□□□□ -0.97
CNOT1-204ENST00000563130 TMEM94Q12767 1356 aa9.01□□□□□ -0.97
CNOT1-204ENST00000563130 SIN3AQ96ST3 1273 aa9□□□□□ -0.97
CNOT1-204ENST00000563130 C14orf93Q9H972 538 aaKnown RBP9□□□□□ -0.97
CNOT1-204ENST00000563130 XIRP1Q702N8 1843 aaKnown RBP9□□□□□ -0.97
CNOT1-204ENST00000563130 NCOA3Q9Y6Q9 1424 aa9□□□□□ -0.97
CNOT1-204ENST00000563130 PROSER2Q86WR7 435 aaPredicted RBP9□□□□□ -0.97
CNOT1-204ENST00000563130 DCAF11Q8TEB1 546 aa9□□□□□ -0.97
CNOT1-204ENST00000563130 PLEKHG5O94827 1062 aa8.99□□□□□ -0.97
CNOT1-204ENST00000563130 PRKAR2AP13861 404 aaKnown RBP8.99□□□□□ -0.97
CNOT1-204ENST00000563130 ILDR1Q86SU0 546 aaPredicted RBP8.99□□□□□ -0.97
CNOT1-204ENST00000563130 ASXL1Q8IXJ9 1541 aa8.99□□□□□ -0.97
CNOT1-204ENST00000563130 MIER1Q8N108 512 aa8.98□□□□□ -0.97
CNOT1-204ENST00000563130 VASPP50552 380 aaPredicted RBP8.98□□□□□ -0.97
CNOT1-204ENST00000563130 TECPR2O15040 1411 aa8.98□□□□□ -0.97
CNOT1-204ENST00000563130 PTCH1Q13635 1447 aa8.98□□□□□ -0.97
CNOT1-204ENST00000563130 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
CNOT1-204ENST00000563130 PLCD3Q8N3E9 789 aa8.97□□□□□ -0.97
CNOT1-204ENST00000563130 RBM33Q96EV2 1170 aaKnown RBP8.97□□□□□ -0.97
CNOT1-204ENST00000563130 CREBZFQ9NS37 354 aa8.97□□□□□ -0.97
CNOT1-204ENST00000563130 LAMC1P11047 1609 aa8.97□□□□□ -0.97
CNOT1-204ENST00000563130 L3MBTL2Q969R5 705 aa8.97□□□□□ -0.97
CNOT1-204ENST00000563130 KDM2AQ9Y2K7 1162 aa8.97□□□□□ -0.97
CNOT1-204ENST00000563130 ABCC11Q96J66 1382 aa8.96□□□□□ -0.97
CNOT1-204ENST00000563130 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.97
CNOT1-204ENST00000563130 TOM1O60784 492 aa8.96□□□□□ -0.97
CNOT1-204ENST00000563130 TMEM132EQ6IEE7 984 aa8.96□□□□□ -0.97
CNOT1-204ENST00000563130 ADGRB1O14514 1584 aa8.96□□□□□ -0.98
CNOT1-204ENST00000563130 LRPPRCP42704 1394 aaKnown RBP8.96□□□□□ -0.98
CNOT1-204ENST00000563130 ROBO2Q9HCK4 1378 aa8.96□□□□□ -0.98
CNOT1-204ENST00000563130 YTHDC2Q9H6S0 1430 aaKnown RBP8.95□□□□□ -0.98
CNOT1-204ENST00000563130 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
CNOT1-204ENST00000563130 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
CNOT1-204ENST00000563130 C19orf44Q9H6X5 657 aa8.94□□□□□ -0.98
CNOT1-204ENST00000563130 MSH6P52701 1360 aa8.94□□□□□ -0.98
CNOT1-204ENST00000563130 CLSPNQ9HAW4 1339 aa8.94□□□□□ -0.98
CNOT1-204ENST00000563130 SIRT1Q96EB6 747 aa8.94□□□□□ -0.98
CNOT1-204ENST00000563130 KNDC1Q76NI1 1749 aa8.94□□□□□ -0.98
CNOT1-204ENST00000563130 DCCP43146 1447 aa8.93□□□□□ -0.98
CNOT1-204ENST00000563130 FAM135BQ49AJ0 1406 aa8.93□□□□□ -0.98
CNOT1-204ENST00000563130 ADGRL3Q9HAR2 1447 aa8.93□□□□□ -0.98
CNOT1-204ENST00000563130 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.92□□□□□ -0.98
CNOT1-204ENST00000563130 KIAA1210Q9ULL0 1709 aa8.92□□□□□ -0.98
CNOT1-204ENST00000563130 AMER1Q5JTC6 1135 aaPredicted RBP8.92□□□□□ -0.98
CNOT1-204ENST00000563130 POTEHQ6S545 545 aa8.92□□□□□ -0.98
CNOT1-204ENST00000563130 DLC1Q96QB1 1528 aa8.92□□□□□ -0.98
CNOT1-204ENST00000563130 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
CNOT1-204ENST00000563130 STK26Q9P289 416 aa8.92□□□□□ -0.98
CNOT1-204ENST00000563130 PLEKHH1Q9ULM0 1364 aa8.91□□□□□ -0.98
CNOT1-204ENST00000563130 C14orf37Q86TY3 774 aa8.91□□□□□ -0.98
CNOT1-204ENST00000563130 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-204ENST00000563130 NALCNQ8IZF0 1738 aa8.91□□□□□ -0.98
CNOT1-204ENST00000563130 TONSLQ96HA7 1378 aa8.91□□□□□ -0.98
CNOT1-204ENST00000563130 NBPF1Q3BBV0 1214 aa8.91□□□□□ -0.98
CNOT1-204ENST00000563130 WAPLQ7Z5K2 1190 aa8.91□□□□□ -0.98
CNOT1-204ENST00000563130 SLAIN2Q9P270 581 aa8.91□□□□□ -0.98
CNOT1-204ENST00000563130 PIP4K2BP78356 416 aa8.9□□□□□ -0.98
CNOT1-204ENST00000563130 ATF3P18847 181 aa8.89□□□□□ -0.99
CNOT1-204ENST00000563130 NBPF8Q3BBV2 869 aa8.89□□□□□ -0.99
CNOT1-204ENST00000563130 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
CNOT1-204ENST00000563130 MST1RQ04912 1400 aa8.89□□□□□ -0.99
CNOT1-204ENST00000563130 CDC42BPGQ6DT37 1551 aa8.88□□□□□ -0.99
CNOT1-204ENST00000563130 PRAM1Q96QH2 718 aa8.88□□□□□ -0.99
CNOT1-204ENST00000563130 TIMELESSQ9UNS1 1208 aa8.88□□□□□ -0.99
CNOT1-204ENST00000563130 TRAK1Q9UPV9 953 aa8.88□□□□□ -0.99
CNOT1-204ENST00000563130 TRPM1Q7Z4N2 1603 aa8.88□□□□□ -0.99
CNOT1-204ENST00000563130 GPRASP1Q5JY77 1395 aa8.88□□□□□ -0.99
CNOT1-204ENST00000563130 ROBO1Q9Y6N7 1651 aa8.87□□□□□ -0.99
CNOT1-204ENST00000563130 HSPA1LP34931 641 aa8.87□□□□□ -0.99
CNOT1-204ENST00000563130 C1orf167Q5SNV9 1468 aa8.87□□□□□ -0.99
CNOT1-204ENST00000563130 ARHGEF28Q8N1W1 1705 aaKnown RBP8.86□□□□□ -0.99
CNOT1-204ENST00000563130 MNX1P50219 401 aaPredicted RBP8.86□□□□□ -0.99
CNOT1-204ENST00000563130 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
CNOT1-204ENST00000563130 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
CNOT1-204ENST00000563130 BRINP3Q76B58 766 aa8.85□□□□□ -0.99
CNOT1-204ENST00000563130 KLHL34Q8N239 644 aa8.85□□□□□ -0.99
CNOT1-204ENST00000563130 POGKQ9P215 609 aa8.85□□□□□ -0.99
CNOT1-204ENST00000563130 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
CNOT1-204ENST00000563130 ROCK2O75116 1388 aaKnown RBP8.85□□□□□ -0.99
CNOT1-204ENST00000563130 SAFB2Q14151 953 aaKnown RBP eCLIP8.84□□□□□ -0.99
CNOT1-204ENST00000563130 FMN2Q9NZ56 1722 aa8.84□□□□□ -0.99
CNOT1-204ENST00000563130 AHDC1Q5TGY3 1603 aaPredicted RBP8.83□□□□□ -1
CNOT1-204ENST00000563130 IFNLR1Q8IU57 520 aaPredicted RBP8.83□□□□□ -1
CNOT1-204ENST00000563130 ORAI2Q96SN7 254 aa8.83□□□□□ -1
CNOT1-204ENST00000563130 MINK1Q8N4C8 1332 aaPredicted RBP8.82□□□□□ -1
CNOT1-204ENST00000563130 CENPJQ9HC77 1338 aaPredicted RBP8.82□□□□□ -1
CNOT1-204ENST00000563130 WASLO00401 505 aaPredicted RBP8.82□□□□□ -1
CNOT1-204ENST00000563130 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
CNOT1-204ENST00000563130 COL16A1Q07092 1604 aaPredicted RBP8.81□□□□□ -1
CNOT1-204ENST00000563130 NHSL1Q5SYE7 1610 aa8.81□□□□□ -1
CNOT1-204ENST00000563130 ANKARQ7Z5J8 1434 aa8.81□□□□□ -1
CNOT1-204ENST00000563130 CARD11Q9BXL7 1154 aa8.81□□□□□ -1
CNOT1-204ENST00000563130 USP32Q8NFA0 1604 aa8.81□□□□□ -1
CNOT1-204ENST00000563130 NUTM2FA1L443 756 aa8.8□□□□□ -1
CNOT1-204ENST00000563130 PRR36Q9H6K5 1346 aa8.8□□□□□ -1
CNOT1-204ENST00000563130 TULP4Q9NRJ4 1543 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms