RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 PANK2Q9BZ23 570 aa6.18□□□□□ -1.42
TCF4-215ENST00000562638 STK26Q9P289 416 aa6.18□□□□□ -1.42
TCF4-215ENST00000562638 TRIM6-TRIM34B2RNG4 842 aa6.17□□□□□ -1.42
TCF4-215ENST00000562638 KIF3CO14782 793 aa6.17□□□□□ -1.42
TCF4-215ENST00000562638 PLCG2P16885 1265 aa6.17□□□□□ -1.42
TCF4-215ENST00000562638 GTF2F1P35269 517 aaKnown RBP eCLIP6.17□□□□□ -1.42
TCF4-215ENST00000562638 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
TCF4-215ENST00000562638 DNAJC14Q6Y2X3 702 aaPredicted RBP6.17□□□□□ -1.42
TCF4-215ENST00000562638 FAM177A1Q8N128 213 aaPredicted RBP6.17□□□□□ -1.42
TCF4-215ENST00000562638 TRIM34Q9BYJ4 488 aa6.17□□□□□ -1.42
TCF4-215ENST00000562638 MED4Q9NPJ6 270 aa6.17□□□□□ -1.42
TCF4-215ENST00000562638 FEZ2Q9UHY8 353 aaPredicted RBP6.17□□□□□ -1.42
TCF4-215ENST00000562638 SMG6Q86US8 1419 aaKnown RBP6.16□□□□□ -1.42
TCF4-215ENST00000562638 SCAPERQ9BY12 1400 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 GUCY2CP25092 1073 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 MLECQ14165 292 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 UVSSAQ2YD98 709 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 RGL3Q3MIN7 710 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 SASS6Q6UVJ0 657 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 SDR16C5Q8N3Y7 309 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 NECTIN2Q92692 538 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 MYH16Q9H6N6 1097 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 CALCOCO1Q9P1Z2 691 aa6.16□□□□□ -1.42
TCF4-215ENST00000562638 IBTKQ9P2D0 1353 aaPredicted RBP6.16□□□□□ -1.42
TCF4-215ENST00000562638 CUX2O14529 1486 aa6.15□□□□□ -1.42
TCF4-215ENST00000562638 COQ9O75208 318 aa6.15□□□□□ -1.42
TCF4-215ENST00000562638 PYGBP11216 843 aa6.15□□□□□ -1.42
TCF4-215ENST00000562638 FAM50AQ14320 339 aaKnown RBP6.15□□□□□ -1.42
TCF4-215ENST00000562638 MYBPC2Q14324 1141 aa6.15□□□□□ -1.42
TCF4-215ENST00000562638 DCAF8Q5TAQ9 597 aa6.15□□□□□ -1.42
TCF4-215ENST00000562638 ARHGEF1Q92888 912 aaKnown RBP6.15□□□□□ -1.42
TCF4-215ENST00000562638 NBPF3Q9H094 633 aa6.15□□□□□ -1.42
TCF4-215ENST00000562638 OCEL1Q9H607 264 aa6.15□□□□□ -1.42
TCF4-215ENST00000562638 ANKRD33BA6NCL7 494 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 HDAC1Q13547 482 aaPredicted RBP6.14□□□□□ -1.43
TCF4-215ENST00000562638 ATP2B3Q16720 1220 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 CSPP1Q1MSJ5 1256 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 ICE2Q659A1 982 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 ZNF710Q8N1W2 664 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 MNS1Q8NEH6 495 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 PCDHB8Q9UN66 801 aa6.14□□□□□ -1.43
TCF4-215ENST00000562638 PPP1R12AO14974 1030 aaPredicted RBP6.13□□□□□ -1.43
TCF4-215ENST00000562638 SLFN14P0C7P3 912 aa6.13□□□□□ -1.43
TCF4-215ENST00000562638 MCM5P33992 734 aa6.13□□□□□ -1.43
TCF4-215ENST00000562638 FAM9BQ8IZU0 186 aa6.13□□□□□ -1.43
TCF4-215ENST00000562638 ZNF513Q8N8E2 541 aaPredicted RBP6.13□□□□□ -1.43
TCF4-215ENST00000562638 JMYQ8N9B5 988 aa6.13□□□□□ -1.43
TCF4-215ENST00000562638 PNISRQ8TF01 805 aaKnown RBP6.13□□□□□ -1.43
TCF4-215ENST00000562638 ZBTB9Q96C00 473 aa6.13□□□□□ -1.43
TCF4-215ENST00000562638 FEZ1Q99689 392 aa6.13□□□□□ -1.43
TCF4-215ENST00000562638 GRPEL1Q9HAV7 217 aa6.13□□□□□ -1.43
TCF4-215ENST00000562638 ZBTB7CA1YPR0 619 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 ANP32CO43423 234 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 DHX16O60231 1041 aaKnown RBP6.12□□□□□ -1.43
TCF4-215ENST00000562638 GTF2A1P52655 376 aaPredicted RBP6.12□□□□□ -1.43
TCF4-215ENST00000562638 GSCP56915 257 aaPredicted RBP6.12□□□□□ -1.43
TCF4-215ENST00000562638 CCDC173Q0VFZ6 552 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 C1QTNF12Q5T7M4 302 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 MYRIPQ8NFW9 859 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 SLC26A8Q96RN1 970 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 R3HCC1Q9Y3T6 440 aaKnown RBP6.12□□□□□ -1.43
TCF4-215ENST00000562638 PAXBP1Q9Y5B6 917 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 MRVI1Q9Y6F6 885 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 RPS6KL1Q9Y6S9 549 aa6.12□□□□□ -1.43
TCF4-215ENST00000562638 CTAGE5O15320 804 aa6.11□□□□□ -1.43
TCF4-215ENST00000562638 NEFHP12036 1026 aa6.11□□□□□ -1.43
TCF4-215ENST00000562638 CBX1P83916 185 aa6.11□□□□□ -1.43
TCF4-215ENST00000562638 SPTY2D1Q68D10 685 aaPredicted RBP6.11□□□□□ -1.43
TCF4-215ENST00000562638 MSL3Q8N5Y2 521 aaKnown RBP6.11□□□□□ -1.43
TCF4-215ENST00000562638 NUB1Q9Y5A7 615 aa6.11□□□□□ -1.43
TCF4-215ENST00000562638 CADPSQ9ULU8 1353 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 IPO8O15397 1037 aaKnown RBP6.1□□□□□ -1.43
TCF4-215ENST00000562638 SCP2P22307 547 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 CALRP27797 417 aaKnown RBP6.1□□□□□ -1.43
TCF4-215ENST00000562638 CD151P48509 253 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 RBM25P49756 843 aaKnown RBP6.1□□□□□ -1.43
TCF4-215ENST00000562638 TRDNQ13061 729 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 MMRN1Q13201 1228 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 DDX46Q7L014 1031 aaKnown RBP6.1□□□□□ -1.43
TCF4-215ENST00000562638 RPAINQ86UA6 219 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 SPNS2Q8IVW8 549 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 CALR3Q96L12 384 aaKnown RBP6.1□□□□□ -1.43
TCF4-215ENST00000562638 ANTXR1Q9H6X2 564 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 NOL7Q9UMY1 257 aaKnown RBP6.1□□□□□ -1.43
TCF4-215ENST00000562638 KNSTRNQ9Y448 316 aa6.1□□□□□ -1.43
TCF4-215ENST00000562638 VIRMAQ69YN4 1812 aaKnown RBP6.1□□□□□ -1.43
TCF4-215ENST00000562638 KDM4AO75164 1064 aa6.09□□□□□ -1.43
TCF4-215ENST00000562638 HSP90AB1P08238 724 aaKnown RBP6.09□□□□□ -1.43
TCF4-215ENST00000562638 TDO2P48775 406 aa6.09□□□□□ -1.43
TCF4-215ENST00000562638 HNRNPUQ00839 825 aaKnown RBP eCLIP6.09□□□□□ -1.43
TCF4-215ENST00000562638 ZNF771Q7L3S4 317 aaPredicted RBP6.09□□□□□ -1.43
TCF4-215ENST00000562638 MARVELD3Q96A59 401 aa6.09□□□□□ -1.43
TCF4-215ENST00000562638 PRIMPOLQ96LW4 560 aa6.09□□□□□ -1.43
TCF4-215ENST00000562638 TMEM121BQ9BXQ6 578 aaPredicted RBP6.09□□□□□ -1.43
TCF4-215ENST00000562638 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.09□□□□□ -1.43
TCF4-215ENST00000562638 OGFRQ9NZT2 677 aa6.09□□□□□ -1.43
TCF4-215ENST00000562638 CCDC144AA2RUR9 1427 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 KIAA1107Q9UPP5 1409 aa6.08□□□□□ -1.44
TCF4-215ENST00000562638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms