RNA–Protein interactions for RNA: ENST00000562589.5

E4F1-202, Transcript of E4F transcription factor 1, humanhuman

TSL 5

Gene E4F1, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-202ENST00000562589 AHDC1Q5TGY3 1603 aaPredicted RBP36.3■■■■□ 3.4
E4F1-202ENST00000562589 KIAA1210Q9ULL0 1709 aa36.28■■■■□ 3.4
E4F1-202ENST00000562589 PRAM1Q96QH2 718 aa36.27■■■■□ 3.4
E4F1-202ENST00000562589 TRAK1Q9UPV9 953 aa36.25■■■■□ 3.39
E4F1-202ENST00000562589 COL16A1Q07092 1604 aaPredicted RBP36.25■■■■□ 3.39
E4F1-202ENST00000562589 DISP3Q9P2K9 1392 aa36.23■■■■□ 3.39
E4F1-202ENST00000562589 POGKQ9P215 609 aa36.22■■■■□ 3.39
E4F1-202ENST00000562589 MED1Q15648 1581 aaPredicted RBP36.2■■■■□ 3.39
E4F1-202ENST00000562589 NHSL1Q5SYE7 1610 aa36.19■■■■□ 3.38
E4F1-202ENST00000562589 SAFB2Q14151 953 aaKnown RBP eCLIP36.18■■■■□ 3.38
E4F1-202ENST00000562589 ORAI2Q96SN7 254 aa36.18■■■■□ 3.38
E4F1-202ENST00000562589 PCGF6Q9BYE7 350 aa36.17■■■■□ 3.38
E4F1-202ENST00000562589 JCADQ9P266 1359 aa36.16■■■■□ 3.38
E4F1-202ENST00000562589 FMN2Q9NZ56 1722 aa36.15■■■■□ 3.38
E4F1-202ENST00000562589 NBPF1Q3BBV0 1214 aa36.15■■■■□ 3.38
E4F1-202ENST00000562589 ARHGEF28Q8N1W1 1705 aaKnown RBP36.12■■■■□ 3.37
E4F1-202ENST00000562589 ADGRB2O60241 1585 aa36.11■■■■□ 3.37
E4F1-202ENST00000562589 ESCO1Q5FWF5 840 aa36.1■■■■□ 3.37
E4F1-202ENST00000562589 DDX17Q92841 729 aaKnown RBP36.1■■■■□ 3.37
E4F1-202ENST00000562589 NUTM2FA1L443 756 aa36.08■■■■□ 3.37
E4F1-202ENST00000562589 TONSLQ96HA7 1378 aa36.06■■■■□ 3.36
E4F1-202ENST00000562589 LRRC59Q96AG4 307 aaKnown RBP36.05■■■■□ 3.36
E4F1-202ENST00000562589 MINK1Q8N4C8 1332 aaPredicted RBP36.05■■■■□ 3.36
E4F1-202ENST00000562589 TRPM1Q7Z4N2 1603 aa36.05■■■■□ 3.36
E4F1-202ENST00000562589 SHPRHQ149N8 1683 aa36.04■■■■□ 3.36
E4F1-202ENST00000562589 SOS2Q07890 1332 aaPredicted RBP36.04■■■■□ 3.36
E4F1-202ENST00000562589 HIRIP3Q9BW71 556 aaPredicted RBP36.03■■■■□ 3.36
E4F1-202ENST00000562589 SPATA31A6Q5VVP1 1343 aa36.01■■■■□ 3.35
E4F1-202ENST00000562589 NPHP3Q7Z494 1330 aa36■■■■□ 3.35
E4F1-202ENST00000562589 ANKARQ7Z5J8 1434 aa36■■■■□ 3.35
E4F1-202ENST00000562589 NBPF8Q3BBV2 869 aa35.99■■■■□ 3.35
E4F1-202ENST00000562589 WASLO00401 505 aaPredicted RBP35.98■■■■□ 3.35
E4F1-202ENST00000562589 RGPD8O14715 1765 aaPredicted RBP35.97■■■■□ 3.35
E4F1-202ENST00000562589 EIF3AQ14152 1382 aaKnown RBP35.97■■■■□ 3.35
E4F1-202ENST00000562589 KIF1AQ12756 1690 aa35.97■■■■□ 3.35
E4F1-202ENST00000562589 FOXO3O43524 673 aa35.96■■■■□ 3.35
E4F1-202ENST00000562589 USP32Q8NFA0 1604 aa35.95■■■■□ 3.35
E4F1-202ENST00000562589 ROCK2O75116 1388 aaKnown RBP35.95■■■■□ 3.35
E4F1-202ENST00000562589 PHF23Q9BUL5 403 aaPredicted RBP35.95■■■■□ 3.35
E4F1-202ENST00000562589 PXDNQ92626 1479 aa35.93■■■■□ 3.34
E4F1-202ENST00000562589 PHF8Q9UPP1 1060 aa35.93■■■■□ 3.34
E4F1-202ENST00000562589 TULP4Q9NRJ4 1543 aa35.93■■■■□ 3.34
E4F1-202ENST00000562589 PNPLA6Q8IY17 1366 aa35.92■■■■□ 3.34
E4F1-202ENST00000562589 CLSPNQ9HAW4 1339 aa35.92■■■■□ 3.34
E4F1-202ENST00000562589 CENPJQ9HC77 1338 aaPredicted RBP35.9■■■■□ 3.34
E4F1-202ENST00000562589 GPRASP1Q5JY77 1395 aa35.89■■■■□ 3.34
E4F1-202ENST00000562589 LRP6O75581 1613 aa35.89■■■■□ 3.34
E4F1-202ENST00000562589 PRR36Q9H6K5 1346 aa35.88■■■■□ 3.33
E4F1-202ENST00000562589 XPCQ01831 940 aaPredicted RBP35.86■■■■□ 3.33
E4F1-202ENST00000562589 ILDR2Q71H61 639 aa35.86■■■■□ 3.33
E4F1-202ENST00000562589 CDK19Q9BWU1 502 aa35.85■■■■□ 3.33
E4F1-202ENST00000562589 RGS17Q9UGC6 210 aaPredicted RBP35.83■■■■□ 3.33
E4F1-202ENST00000562589 RALGAPBQ86X10 1494 aa35.83■■■■□ 3.33
E4F1-202ENST00000562589 QRICH2Q9H0J4 1663 aa35.81■■■■□ 3.32
E4F1-202ENST00000562589 NUTM2BA6NNL0 878 aaPredicted RBP35.81■■■■□ 3.32
E4F1-202ENST00000562589 NUTM2EB1AL46 878 aaPredicted RBP35.81■■■■□ 3.32
E4F1-202ENST00000562589 KRT28Q7Z3Y7 464 aa35.81■■■■□ 3.32
E4F1-202ENST00000562589 NUTM2AQ8IVF1 878 aaPredicted RBP35.81■■■■□ 3.32
E4F1-202ENST00000562589 ATP7BP35670 1465 aa35.8■■■■□ 3.32
E4F1-202ENST00000562589 PMFBP1Q8TBY8 1022 aa35.8■■■■□ 3.32
E4F1-202ENST00000562589 NUDT16Q96DE0 195 aaKnown RBP35.8■■■■□ 3.32
E4F1-202ENST00000562589 COL22A1Q8NFW1 1626 aaPredicted RBP35.79■■■■□ 3.32
E4F1-202ENST00000562589 MEX3CQ5U5Q3 659 aaKnown RBP35.78■■■■□ 3.32
E4F1-202ENST00000562589 PSME1Q06323 249 aa35.77■■■■□ 3.32
E4F1-202ENST00000562589 CARD11Q9BXL7 1154 aa35.77■■■■□ 3.32
E4F1-202ENST00000562589 TIMELESSQ9UNS1 1208 aa35.76■■■■□ 3.32
E4F1-202ENST00000562589 ITSN1Q15811 1721 aa35.76■■■■□ 3.31
E4F1-202ENST00000562589 SPATA31A3Q5VYP0 1347 aa35.76■■■■□ 3.31
E4F1-202ENST00000562589 SBNO1A3KN83 1393 aa35.73■■■■□ 3.31
E4F1-202ENST00000562589 CCDC61Q9Y6R9 512 aa35.71■■■■□ 3.31
E4F1-202ENST00000562589 TNS3Q68CZ2 1445 aa35.7■■■■□ 3.31
E4F1-202ENST00000562589 TOPAZ1Q8N9V7 1692 aa35.7■■■■□ 3.31
E4F1-202ENST00000562589 SRPK2P78362 688 aaKnown RBP35.69■■■■□ 3.3
E4F1-202ENST00000562589 NGDNQ8NEJ9 315 aaKnown RBP35.69■■■■□ 3.3
E4F1-202ENST00000562589 CCER1Q8TC90 406 aaPredicted RBP35.69■■■■□ 3.3
E4F1-202ENST00000562589 EVC2Q86UK5 1308 aa35.66■■■■□ 3.3
E4F1-202ENST00000562589 CABP2Q9NPB3 220 aa35.66■■■■□ 3.3
E4F1-202ENST00000562589 PLEKHG3A1L390 1219 aa35.65■■■■□ 3.3
E4F1-202ENST00000562589 TRPM3Q9HCF6 1732 aaPredicted RBP35.64■■■■□ 3.3
E4F1-202ENST00000562589 POTEAQ6S8J7 498 aa35.64■■■■□ 3.3
E4F1-202ENST00000562589 POLR3AO14802 1390 aaPredicted RBP35.64■■■■□ 3.3
E4F1-202ENST00000562589 SBNO2Q9Y2G9 1366 aa35.64■■■■□ 3.3
E4F1-202ENST00000562589 ADAMTS2O95450 1211 aa35.63■■■■□ 3.29
E4F1-202ENST00000562589 ARHGEF10O15013 1369 aa35.63■■■■□ 3.29
E4F1-202ENST00000562589 ZNF772Q68DY9 489 aaPredicted RBP35.62■■■■□ 3.29
E4F1-202ENST00000562589 C8orf37Q96NL8 207 aa35.61■■■■□ 3.29
E4F1-202ENST00000562589 ACEP12821 1306 aa35.59■■■■□ 3.29
E4F1-202ENST00000562589 PPIP5K1Q6PFW1 1433 aa35.59■■■■□ 3.29
E4F1-202ENST00000562589 AFF2P51816 1311 aa35.57■■■■□ 3.29
E4F1-202ENST00000562589 LMOD2Q6P5Q4 547 aa35.57■■■■□ 3.28
E4F1-202ENST00000562589 ALS2Q96Q42 1657 aa35.56■■■■□ 3.28
E4F1-202ENST00000562589 NGLY1Q96IV0 654 aa35.54■■■■□ 3.28
E4F1-202ENST00000562589 MARF1Q9Y4F3 1742 aaKnown RBP35.52■■■■□ 3.28
E4F1-202ENST00000562589 CABP1Q9NZU7 370 aa35.51■■■■□ 3.28
E4F1-202ENST00000562589 PAK3O75914 559 aaPredicted RBP35.5■■■■□ 3.27
E4F1-202ENST00000562589 SOCS7O14512 581 aa35.49■■■■□ 3.27
E4F1-202ENST00000562589 FNBP4Q8N3X1 1017 aaPredicted RBP35.49■■■■□ 3.27
E4F1-202ENST00000562589 CABLES1Q8TDN4 633 aa35.49■■■■□ 3.27
E4F1-202ENST00000562589 ATAD2Q6PL18 1390 aa35.48■■■■□ 3.27
E4F1-202ENST00000562589 ABCA3Q99758 1704 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms