RNA–Protein interactions for RNA: ENST00000562428.6

NAE1-207, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-207ENST00000562428 SNIP1Q8TAD8 396 aaKnown RBP12.82□□□□□ -0.36
NAE1-207ENST00000562428 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
NAE1-207ENST00000562428 SEMA3EO15041 775 aa12.81□□□□□ -0.36
NAE1-207ENST00000562428 GCGRP47871 477 aa12.81□□□□□ -0.36
NAE1-207ENST00000562428 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
NAE1-207ENST00000562428 HIC1Q14526 733 aa12.8□□□□□ -0.36
NAE1-207ENST00000562428 MSS51Q4VC12 460 aa12.8□□□□□ -0.36
NAE1-207ENST00000562428 MRGPRX2Q96LB1 330 aa12.8□□□□□ -0.36
NAE1-207ENST00000562428 HPS1Q92902 700 aa12.79□□□□□ -0.36
NAE1-207ENST00000562428 TRIM32Q13049 653 aa12.78□□□□□ -0.36
NAE1-207ENST00000562428 ZBTB24O43167 697 aaPredicted RBP12.77□□□□□ -0.37
NAE1-207ENST00000562428 PHOX2BQ99453 314 aa12.77□□□□□ -0.37
NAE1-207ENST00000562428 GPR37O15354 613 aa12.75□□□□□ -0.37
NAE1-207ENST00000562428 LORP23490 312 aaPredicted RBP12.74□□□□□ -0.37
NAE1-207ENST00000562428 SENP2Q9HC62 589 aa12.74□□□□□ -0.37
NAE1-207ENST00000562428 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
NAE1-207ENST00000562428 MMP16P51512 607 aa12.72□□□□□ -0.37
NAE1-207ENST00000562428 GNPATO15228 680 aa12.7□□□□□ -0.38
NAE1-207ENST00000562428 LOC100996750A0A140TA64 210 aa12.69□□□□□ -0.38
NAE1-207ENST00000562428 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
NAE1-207ENST00000562428 KRTAP4-6Q9BYQ5 205 aa12.69□□□□□ -0.38
NAE1-207ENST00000562428 SKOR1P84550 965 aa12.68□□□□□ -0.38
NAE1-207ENST00000562428 KIFC2Q96AC6 838 aa12.66□□□□□ -0.38
NAE1-207ENST00000562428 DXOO77932 396 aaKnown RBP12.65□□□□□ -0.38
NAE1-207ENST00000562428 GMPRP36959 345 aa12.65□□□□□ -0.38
NAE1-207ENST00000562428 SULF1Q8IWU6 871 aa12.65□□□□□ -0.38
NAE1-207ENST00000562428 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
NAE1-207ENST00000562428 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
NAE1-207ENST00000562428 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
NAE1-207ENST00000562428 REPIN1Q9BWE0 567 aaKnown RBP12.61□□□□□ -0.39
NAE1-207ENST00000562428 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
NAE1-207ENST00000562428 Q3C1V9 767 aa12.59□□□□□ -0.39
NAE1-207ENST00000562428 TRIM46Q7Z4K8 759 aa12.59□□□□□ -0.39
NAE1-207ENST00000562428 HLA-CQ95604 372 aa12.59□□□□□ -0.39
NAE1-207ENST00000562428 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
NAE1-207ENST00000562428 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
NAE1-207ENST00000562428 BMP1P13497 986 aa12.57□□□□□ -0.4
NAE1-207ENST00000562428 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
NAE1-207ENST00000562428 CD46P15529 392 aa12.56□□□□□ -0.4
NAE1-207ENST00000562428 VEGFBP49765 207 aa12.56□□□□□ -0.4
NAE1-207ENST00000562428 WNT7BP56706 349 aa12.56□□□□□ -0.4
NAE1-207ENST00000562428 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
NAE1-207ENST00000562428 ZSCAN1Q8NBB4 408 aa12.56□□□□□ -0.4
NAE1-207ENST00000562428 ALDH1A1P00352 501 aa12.55□□□□□ -0.4
NAE1-207ENST00000562428 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
NAE1-207ENST00000562428 SIAH2O43255 324 aa12.54□□□□□ -0.4
NAE1-207ENST00000562428 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.41
NAE1-207ENST00000562428 H3BM21 787 aa12.52□□□□□ -0.41
NAE1-207ENST00000562428 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.41
NAE1-207ENST00000562428 VSIG10Q8N0Z9 540 aa12.51□□□□□ -0.41
NAE1-207ENST00000562428 KDM4AO75164 1064 aa12.5□□□□□ -0.41
NAE1-207ENST00000562428 PTCRAQ6ISU1 281 aaPredicted RBP12.5□□□□□ -0.41
NAE1-207ENST00000562428 NPAS3Q8IXF0 933 aa12.5□□□□□ -0.41
NAE1-207ENST00000562428 IRF7Q92985 503 aa12.5□□□□□ -0.41
NAE1-207ENST00000562428 CAPN5O15484 640 aaPredicted RBP12.47□□□□□ -0.41
NAE1-207ENST00000562428 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
NAE1-207ENST00000562428 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
NAE1-207ENST00000562428 JUNDP17535 347 aa12.44□□□□□ -0.42
NAE1-207ENST00000562428 SMYD5Q6GMV2 418 aa12.44□□□□□ -0.42
NAE1-207ENST00000562428 HOXA2O43364 376 aa12.43□□□□□ -0.42
NAE1-207ENST00000562428 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
NAE1-207ENST00000562428 ZFP42Q96MM3 310 aa12.41□□□□□ -0.42
NAE1-207ENST00000562428 USP46P62068 366 aa12.39□□□□□ -0.43
NAE1-207ENST00000562428 SH3BP2P78314 561 aa12.39□□□□□ -0.43
NAE1-207ENST00000562428 WASF2Q9Y6W5 498 aa12.39□□□□□ -0.43
NAE1-207ENST00000562428 SUZ12Q15022 739 aaKnown RBP12.38□□□□□ -0.43
NAE1-207ENST00000562428 NUDT12Q9BQG2 462 aa12.38□□□□□ -0.43
NAE1-207ENST00000562428 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
NAE1-207ENST00000562428 MDM2Q00987 491 aaPredicted RBP12.35□□□□□ -0.43
NAE1-207ENST00000562428 GSK3AP49840 483 aa12.34□□□□□ -0.43
NAE1-207ENST00000562428 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
NAE1-207ENST00000562428 SOBPA7XYQ1 873 aa12.33□□□□□ -0.44
NAE1-207ENST00000562428 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
NAE1-207ENST00000562428 RETREG3Q86VR2 466 aa12.31□□□□□ -0.44
NAE1-207ENST00000562428 MAP2K5Q13163 448 aa12.3□□□□□ -0.44
NAE1-207ENST00000562428 PCDHGC3Q9UN70 934 aa12.3□□□□□ -0.44
NAE1-207ENST00000562428 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
NAE1-207ENST00000562428 IRF6O14896 467 aa12.28□□□□□ -0.44
NAE1-207ENST00000562428 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
NAE1-207ENST00000562428 PURBQ96QR8 312 aaKnown RBP12.27□□□□□ -0.45
NAE1-207ENST00000562428 CCNYL3P0C7X3 344 aa12.26□□□□□ -0.45
NAE1-207ENST00000562428 TIMP2P16035 220 aa12.26□□□□□ -0.45
NAE1-207ENST00000562428 NNTQ13423 1086 aa12.26□□□□□ -0.45
NAE1-207ENST00000562428 BAP1Q92560 729 aa12.26□□□□□ -0.45
NAE1-207ENST00000562428 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
NAE1-207ENST00000562428 KCNMA1Q12791 1236 aa12.25□□□□□ -0.45
NAE1-207ENST00000562428 KCTD17Q8N5Z5 321 aa12.25□□□□□ -0.45
NAE1-207ENST00000562428 UNC93B1Q9H1C4 597 aa12.25□□□□□ -0.45
NAE1-207ENST00000562428 FAM217BQ9NTX9 383 aaPredicted RBP12.24□□□□□ -0.45
NAE1-207ENST00000562428 MS4A1P11836 297 aa12.23□□□□□ -0.45
NAE1-207ENST00000562428 EVA1BQ9NVM1 165 aa12.23□□□□□ -0.45
NAE1-207ENST00000562428 MPNDQ8N594 471 aa12.22□□□□□ -0.45
NAE1-207ENST00000562428 FDX1P10109 184 aa12.2□□□□□ -0.46
NAE1-207ENST00000562428 WDR4P57081 412 aaKnown RBP12.2□□□□□ -0.46
NAE1-207ENST00000562428 PTPRNQ16849 979 aa12.2□□□□□ -0.46
NAE1-207ENST00000562428 ZNF511Q8NB15 262 aa12.2□□□□□ -0.46
NAE1-207ENST00000562428 VARSP26640 1264 aaKnown RBP12.19□□□□□ -0.46
NAE1-207ENST00000562428 SCARF1Q14162 830 aa12.19□□□□□ -0.46
NAE1-207ENST00000562428 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
NAE1-207ENST00000562428 ADH1CP00326 375 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms