RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF644Q9H582 1327 aaPredicted RBP8.73□□□□□ -1.01
HERC1-213ENST00000561359 ZC3H13Q5T200 1668 aaKnown RBP8.72□□□□□ -1.01
HERC1-213ENST00000561359 PHLPP1O60346 1717 aa8.72□□□□□ -1.01
HERC1-213ENST00000561359 G3V3G9 751 aa8.72□□□□□ -1.01
HERC1-213ENST00000561359 PDCD7Q8N8D1 485 aaKnown RBP8.72□□□□□ -1.01
HERC1-213ENST00000561359 L3MBTL3Q96JM7 780 aaPredicted RBP8.72□□□□□ -1.01
HERC1-213ENST00000561359 XIRP1Q702N8 1843 aaKnown RBP8.72□□□□□ -1.01
HERC1-213ENST00000561359 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.01
HERC1-213ENST00000561359 QTRT2Q9H974 415 aaKnown RBP8.71□□□□□ -1.02
HERC1-213ENST00000561359 RTEL1-TNFRSF6BF6WH68 1400 aa8.71□□□□□ -1.02
HERC1-213ENST00000561359 RBM6P78332 1123 aaKnown RBP8.7□□□□□ -1.02
HERC1-213ENST00000561359 SLC26A8Q96RN1 970 aa8.7□□□□□ -1.02
HERC1-213ENST00000561359 RGS12O14924 1447 aa8.7□□□□□ -1.02
HERC1-213ENST00000561359 MAP3K1Q13233 1512 aa8.7□□□□□ -1.02
HERC1-213ENST00000561359 SETBP1Q9Y6X0 1596 aa8.69□□□□□ -1.02
HERC1-213ENST00000561359 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
HERC1-213ENST00000561359 ATAD2Q6PL18 1390 aa8.69□□□□□ -1.02
HERC1-213ENST00000561359 CASKIN1Q8WXD9 1431 aa8.69□□□□□ -1.02
HERC1-213ENST00000561359 ERVK-7P63135 1459 aa8.69□□□□□ -1.02
HERC1-213ENST00000561359 C3orf67Q6ZVT6 689 aa8.68□□□□□ -1.02
HERC1-213ENST00000561359 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
HERC1-213ENST00000561359 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
HERC1-213ENST00000561359 BCANQ96GW7 911 aa8.68□□□□□ -1.02
HERC1-213ENST00000561359 C8orf37Q96NL8 207 aa8.68□□□□□ -1.02
HERC1-213ENST00000561359 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
HERC1-213ENST00000561359 NCOA2Q15596 1464 aa8.68□□□□□ -1.02
HERC1-213ENST00000561359 ARHGAP23Q9P227 1491 aa8.68□□□□□ -1.02
HERC1-213ENST00000561359 SOX12O15370 315 aa8.67□□□□□ -1.02
HERC1-213ENST00000561359 SLIT1O75093 1534 aa8.67□□□□□ -1.02
HERC1-213ENST00000561359 PRDM15P57071 1507 aaPredicted RBP8.67□□□□□ -1.02
HERC1-213ENST00000561359 COL16A1Q07092 1604 aaPredicted RBP8.67□□□□□ -1.02
HERC1-213ENST00000561359 DPY19L2Q6NUT2 758 aa8.67□□□□□ -1.02
HERC1-213ENST00000561359 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
HERC1-213ENST00000561359 MBD5Q9P267 1494 aa8.67□□□□□ -1.02
HERC1-213ENST00000561359 TMEM2Q9UHN6 1383 aa8.66□□□□□ -1.02
HERC1-213ENST00000561359 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.02
HERC1-213ENST00000561359 UBR1Q8IWV7 1749 aa8.65□□□□□ -1.03
HERC1-213ENST00000561359 TIAM1Q13009 1591 aa8.65□□□□□ -1.03
HERC1-213ENST00000561359 ABCC3O15438 1527 aa8.64□□□□□ -1.03
HERC1-213ENST00000561359 NKTRP30414 1462 aaKnown RBP8.64□□□□□ -1.03
HERC1-213ENST00000561359 MTUS2Q5JR59 1369 aa8.64□□□□□ -1.03
HERC1-213ENST00000561359 EP400Q96L91 3159 aa8.64□□□□□ -1.03
HERC1-213ENST00000561359 ATF3P18847 181 aa8.64□□□□□ -1.03
HERC1-213ENST00000561359 TSPY4P0CV99 314 aa8.63□□□□□ -1.03
HERC1-213ENST00000561359 TSPY10P0CW01 314 aa8.63□□□□□ -1.03
HERC1-213ENST00000561359 NLRP6P59044 892 aa8.63□□□□□ -1.03
HERC1-213ENST00000561359 CADPS2Q86UW7 1296 aa8.63□□□□□ -1.03
HERC1-213ENST00000561359 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
HERC1-213ENST00000561359 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
HERC1-213ENST00000561359 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
HERC1-213ENST00000561359 RSPH4AQ5TD94 716 aa8.62□□□□□ -1.03
HERC1-213ENST00000561359 CCDC141Q6ZP82 1450 aa8.62□□□□□ -1.03
HERC1-213ENST00000561359 FYCO1Q9BQS8 1478 aa8.61□□□□□ -1.03
HERC1-213ENST00000561359 SHPRHQ149N8 1683 aa8.61□□□□□ -1.03
HERC1-213ENST00000561359 AHDC1Q5TGY3 1603 aaPredicted RBP8.61□□□□□ -1.03
HERC1-213ENST00000561359 CFAP65Q6ZU64 1925 aaKnown RBP8.6□□□□□ -1.03
HERC1-213ENST00000561359 ADAMTS2O95450 1211 aa8.6□□□□□ -1.03
HERC1-213ENST00000561359 BRINP3Q76B58 766 aa8.6□□□□□ -1.03
HERC1-213ENST00000561359 FAM163AQ96GL9 167 aaPredicted RBP8.6□□□□□ -1.03
HERC1-213ENST00000561359 C19orf44Q9H6X5 657 aa8.6□□□□□ -1.03
HERC1-213ENST00000561359 IDI1Q13907 227 aa8.59□□□□□ -1.03
HERC1-213ENST00000561359 LRRC59Q96AG4 307 aaKnown RBP8.59□□□□□ -1.03
HERC1-213ENST00000561359 USP21Q9UK80 565 aa8.59□□□□□ -1.03
HERC1-213ENST00000561359 TRPC5Q9UL62 973 aaPredicted RBP8.59□□□□□ -1.03
HERC1-213ENST00000561359 TET3O43151 1660 aa8.59□□□□□ -1.03
HERC1-213ENST00000561359 NWD1Q149M9 1564 aa8.58□□□□□ -1.04
HERC1-213ENST00000561359 HS6ST3Q8IZP7 471 aa8.58□□□□□ -1.04
HERC1-213ENST00000561359 MS4A4AQ96JQ5 239 aa8.58□□□□□ -1.04
HERC1-213ENST00000561359 KDM5AP29375 1690 aaKnown RBP8.58□□□□□ -1.04
HERC1-213ENST00000561359 EFCAB6Q5THR3 1501 aa8.58□□□□□ -1.04
HERC1-213ENST00000561359 NCOA3Q9Y6Q9 1424 aa8.57□□□□□ -1.04
HERC1-213ENST00000561359 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
HERC1-213ENST00000561359 YY1P25490 414 aa8.57□□□□□ -1.04
HERC1-213ENST00000561359 MFRPQ9BY79 579 aa8.57□□□□□ -1.04
HERC1-213ENST00000561359 SETD5Q9C0A6 1442 aa8.56□□□□□ -1.04
HERC1-213ENST00000561359 PIK3C2BO00750 1634 aa8.56□□□□□ -1.04
HERC1-213ENST00000561359 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
HERC1-213ENST00000561359 DEFB132Q7Z7B7 95 aa8.56□□□□□ -1.04
HERC1-213ENST00000561359 CAMSAP2Q08AD1 1489 aa8.56□□□□□ -1.04
HERC1-213ENST00000561359 DIP2AQ14689 1571 aa8.56□□□□□ -1.04
HERC1-213ENST00000561359 ARHGAP31Q2M1Z3 1444 aa8.55□□□□□ -1.04
HERC1-213ENST00000561359 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
HERC1-213ENST00000561359 MICALL2Q8IY33 904 aa8.55□□□□□ -1.04
HERC1-213ENST00000561359 FBXO22Q8NEZ5 403 aa8.55□□□□□ -1.04
HERC1-213ENST00000561359 PNPLA6Q8IY17 1366 aa8.54□□□□□ -1.04
HERC1-213ENST00000561359 PSDA5PKW4 1024 aaPredicted RBP8.54□□□□□ -1.04
HERC1-213ENST00000561359 SNPHO15079 494 aa8.54□□□□□ -1.04
HERC1-213ENST00000561359 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
HERC1-213ENST00000561359 AMER1Q5JTC6 1135 aaPredicted RBP8.54□□□□□ -1.04
HERC1-213ENST00000561359 DDX17Q92841 729 aaKnown RBP8.54□□□□□ -1.04
HERC1-213ENST00000561359 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
HERC1-213ENST00000561359 MAST1Q9Y2H9 1570 aa8.53□□□□□ -1.04
HERC1-213ENST00000561359 HRCP23327 699 aa8.53□□□□□ -1.04
HERC1-213ENST00000561359 TBX22Q9Y458 520 aa8.53□□□□□ -1.04
HERC1-213ENST00000561359 CEP152O94986 1710 aa8.53□□□□□ -1.04
HERC1-213ENST00000561359 LRP5O75197 1615 aa8.53□□□□□ -1.04
HERC1-213ENST00000561359 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
HERC1-213ENST00000561359 PLEKHG1Q9ULL1 1385 aa8.52□□□□□ -1.05
HERC1-213ENST00000561359 MROH1Q8NDA8 1641 aa8.52□□□□□ -1.05
HERC1-213ENST00000561359 FNBP4Q8N3X1 1017 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms