RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
USP8-218ENST00000561330 PCDHB15Q9Y5E8 787 aa10.41□□□□□ -0.74
USP8-218ENST00000561330 C6orf229H3BNL8 230 aa10.4□□□□□ -0.74
USP8-218ENST00000561330 TUSC1Q2TAM9 212 aa10.4□□□□□ -0.74
USP8-218ENST00000561330 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
USP8-218ENST00000561330 RNF19BQ6ZMZ0 732 aa10.4□□□□□ -0.74
USP8-218ENST00000561330 THAP11Q96EK4 314 aa10.4□□□□□ -0.74
USP8-218ENST00000561330 SPSB2Q99619 263 aa10.4□□□□□ -0.74
USP8-218ENST00000561330 TLL1O43897 1013 aa10.39□□□□□ -0.75
USP8-218ENST00000561330 PROCA1Q8NCQ7 364 aaPredicted RBP10.39□□□□□ -0.75
USP8-218ENST00000561330 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
USP8-218ENST00000561330 ADH1BP00325 375 aa10.38□□□□□ -0.75
USP8-218ENST00000561330 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
USP8-218ENST00000561330 MTMR2Q13614 643 aa10.37□□□□□ -0.75
USP8-218ENST00000561330 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
USP8-218ENST00000561330 PRPF38BQ5VTL8 546 aaKnown RBP10.37□□□□□ -0.75
USP8-218ENST00000561330 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
USP8-218ENST00000561330 ZBTB3Q9H5J0 574 aa10.37□□□□□ -0.75
USP8-218ENST00000561330 SPDYE5A6NIY4 337 aa10.36□□□□□ -0.75
USP8-218ENST00000561330 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
USP8-218ENST00000561330 RETREG3Q86VR2 466 aa10.36□□□□□ -0.75
USP8-218ENST00000561330 NUTM2BA6NNL0 878 aaPredicted RBP10.35□□□□□ -0.75
USP8-218ENST00000561330 NUTM2EB1AL46 878 aaPredicted RBP10.35□□□□□ -0.75
USP8-218ENST00000561330 HRCP23327 699 aa10.35□□□□□ -0.75
USP8-218ENST00000561330 QPCTQ16769 361 aa10.35□□□□□ -0.75
USP8-218ENST00000561330 NUTM2DQ5VT03 806 aaPredicted RBP10.35□□□□□ -0.75
USP8-218ENST00000561330 NUTM2AQ8IVF1 878 aaPredicted RBP10.35□□□□□ -0.75
USP8-218ENST00000561330 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
USP8-218ENST00000561330 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.35□□□□□ -0.75
USP8-218ENST00000561330 LILRB3O75022 631 aa10.34□□□□□ -0.75
USP8-218ENST00000561330 MSS51Q4VC12 460 aa10.33□□□□□ -0.76
USP8-218ENST00000561330 FAM160A2Q8N612 972 aaPredicted RBP10.33□□□□□ -0.76
USP8-218ENST00000561330 SLC6A16Q9GZN6 736 aa10.33□□□□□ -0.76
USP8-218ENST00000561330 GGCXP38435 758 aa10.31□□□□□ -0.76
USP8-218ENST00000561330 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
USP8-218ENST00000561330 S1PR4O95977 384 aa10.3□□□□□ -0.76
USP8-218ENST00000561330 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
USP8-218ENST00000561330 PPP2R2DQ66LE6 453 aa10.29□□□□□ -0.76
USP8-218ENST00000561330 CFAP99D6REC4 459 aa10.28□□□□□ -0.76
USP8-218ENST00000561330 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
USP8-218ENST00000561330 PRDM9Q9NQV7 894 aa10.28□□□□□ -0.76
USP8-218ENST00000561330 JUNDP17535 347 aa10.27□□□□□ -0.77
USP8-218ENST00000561330 MMP16P51512 607 aa10.27□□□□□ -0.77
USP8-218ENST00000561330 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.27□□□□□ -0.77
USP8-218ENST00000561330 A0A0G2JS52 829 aa10.26□□□□□ -0.77
USP8-218ENST00000561330 DXOO77932 396 aaKnown RBP10.26□□□□□ -0.77
USP8-218ENST00000561330 FBXO31Q5XUX0 539 aaPredicted RBP10.26□□□□□ -0.77
USP8-218ENST00000561330 TSC1Q92574 1164 aa10.26□□□□□ -0.77
USP8-218ENST00000561330 RFC5P40937 340 aa10.25□□□□□ -0.77
USP8-218ENST00000561330 DESI1Q6ICB0 168 aa10.25□□□□□ -0.77
USP8-218ENST00000561330 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
USP8-218ENST00000561330 RNF223E7ERA6 249 aa10.24□□□□□ -0.77
USP8-218ENST00000561330 PPEF1O14829 653 aaPredicted RBP10.22□□□□□ -0.77
USP8-218ENST00000561330 AP1G2O75843 785 aa10.22□□□□□ -0.77
USP8-218ENST00000561330 TMEM259Q4ZIN3 620 aa10.22□□□□□ -0.77
USP8-218ENST00000561330 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
USP8-218ENST00000561330 LYPD8Q6UX82 237 aa10.21□□□□□ -0.77
USP8-218ENST00000561330 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.77
USP8-218ENST00000561330 PTPRNQ16849 979 aa10.2□□□□□ -0.78
USP8-218ENST00000561330 CTDSPL2Q05D32 466 aa10.19□□□□□ -0.78
USP8-218ENST00000561330 CCDC24Q8N4L8 307 aa10.19□□□□□ -0.78
USP8-218ENST00000561330 NUDT12Q9BQG2 462 aa10.19□□□□□ -0.78
USP8-218ENST00000561330 CCNYL3P0C7X3 344 aa10.18□□□□□ -0.78
USP8-218ENST00000561330 PER1O15534 1290 aaPredicted RBP10.17□□□□□ -0.78
USP8-218ENST00000561330 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
USP8-218ENST00000561330 USP17L8P0C7I0 530 aa10.15□□□□□ -0.78
USP8-218ENST00000561330 EVA1BQ9NVM1 165 aa10.15□□□□□ -0.78
USP8-218ENST00000561330 CTHP32929 405 aa10.14□□□□□ -0.79
USP8-218ENST00000561330 ZBTB24O43167 697 aaPredicted RBP10.13□□□□□ -0.79
USP8-218ENST00000561330 KCNH2Q12809 1159 aa10.13□□□□□ -0.79
USP8-218ENST00000561330 PLA2G2CQ5R387 149 aa10.13□□□□□ -0.79
USP8-218ENST00000561330 LRRN4Q8WUT4 740 aa10.13□□□□□ -0.79
USP8-218ENST00000561330 RGS20O76081 388 aa10.11□□□□□ -0.79
USP8-218ENST00000561330 F12P00748 615 aaPredicted RBP10.11□□□□□ -0.79
USP8-218ENST00000561330 SLC19A1P41440 591 aa10.11□□□□□ -0.79
USP8-218ENST00000561330 PRKD2Q9BZL6 878 aa10.11□□□□□ -0.79
USP8-218ENST00000561330 RPIAP49247 311 aa10.1□□□□□ -0.79
USP8-218ENST00000561330 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
USP8-218ENST00000561330 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
USP8-218ENST00000561330 MAP10Q9P2G4 905 aa10.1□□□□□ -0.79
USP8-218ENST00000561330 CD2BP2O95400 341 aaKnown RBP10.08□□□□□ -0.8
USP8-218ENST00000561330 UNC93B1Q9H1C4 597 aa10.08□□□□□ -0.8
USP8-218ENST00000561330 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
USP8-218ENST00000561330 SNRKQ9NRH2 765 aa10.08□□□□□ -0.8
USP8-218ENST00000561330 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
USP8-218ENST00000561330 EMID1Q96A84 441 aaPredicted RBP10.07□□□□□ -0.8
USP8-218ENST00000561330 APBB1O00213 710 aa10.06□□□□□ -0.8
USP8-218ENST00000561330 SOCS7O14512 581 aa10.06□□□□□ -0.8
USP8-218ENST00000561330 TRIM32Q13049 653 aa10.06□□□□□ -0.8
USP8-218ENST00000561330 NR6A1Q15406 480 aa10.06□□□□□ -0.8
USP8-218ENST00000561330 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
USP8-218ENST00000561330 FLIIQ13045 1269 aa10.05□□□□□ -0.8
USP8-218ENST00000561330 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
USP8-218ENST00000561330 MTMR14Q8NCE2 650 aa10.05□□□□□ -0.8
USP8-218ENST00000561330 MCM6Q14566 821 aa10.04□□□□□ -0.8
USP8-218ENST00000561330 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
USP8-218ENST00000561330 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
USP8-218ENST00000561330 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
USP8-218ENST00000561330 BAP1Q92560 729 aa10.03□□□□□ -0.8
USP8-218ENST00000561330 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms