RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 ESCO1Q5FWF5 840 aa24.08■■□□□ 1.45
CRTC3-212ENST00000561218 TECPR2O15040 1411 aa24.08■■□□□ 1.44
CRTC3-212ENST00000561218 SOS2Q07890 1332 aaPredicted RBP24.08■■□□□ 1.44
CRTC3-212ENST00000561218 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
CRTC3-212ENST00000561218 C14orf93Q9H972 538 aaKnown RBP24.07■■□□□ 1.44
CRTC3-212ENST00000561218 AFF2P51816 1311 aa24.06■■□□□ 1.44
CRTC3-212ENST00000561218 YTHDC2Q9H6S0 1430 aaKnown RBP24.05■■□□□ 1.44
CRTC3-212ENST00000561218 C8orf37Q96NL8 207 aa24.05■■□□□ 1.44
CRTC3-212ENST00000561218 RXRBP28702 533 aa24.04■■□□□ 1.44
CRTC3-212ENST00000561218 CFAP70Q5T0N1 1121 aa24.04■■□□□ 1.44
CRTC3-212ENST00000561218 PLEKHH1Q9ULM0 1364 aa24.03■■□□□ 1.44
CRTC3-212ENST00000561218 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
CRTC3-212ENST00000561218 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
CRTC3-212ENST00000561218 NPHP3Q7Z494 1330 aa24.03■■□□□ 1.44
CRTC3-212ENST00000561218 ADAMTS2O95450 1211 aa24.02■■□□□ 1.44
CRTC3-212ENST00000561218 SIRT1Q96EB6 747 aa24.02■■□□□ 1.44
CRTC3-212ENST00000561218 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.44
CRTC3-212ENST00000561218 LAMC1P11047 1609 aa24.01■■□□□ 1.43
CRTC3-212ENST00000561218 MYOM2P54296 1465 aa24■■□□□ 1.43
CRTC3-212ENST00000561218 FOXO3O43524 673 aa24■■□□□ 1.43
CRTC3-212ENST00000561218 HRCP23327 699 aa24■■□□□ 1.43
CRTC3-212ENST00000561218 NGLY1Q96IV0 654 aa24■■□□□ 1.43
CRTC3-212ENST00000561218 NRXN1Q9ULB1 1477 aa24■■□□□ 1.43
CRTC3-212ENST00000561218 XPCQ01831 940 aaPredicted RBP23.97■■□□□ 1.43
CRTC3-212ENST00000561218 QTRT2Q9H974 415 aaKnown RBP23.97■■□□□ 1.43
CRTC3-212ENST00000561218 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
CRTC3-212ENST00000561218 KDM2AQ9Y2K7 1162 aa23.96■■□□□ 1.43
CRTC3-212ENST00000561218 PRAM1Q96QH2 718 aa23.95■■□□□ 1.42
CRTC3-212ENST00000561218 SAFB2Q14151 953 aaKnown RBP eCLIP23.94■■□□□ 1.42
CRTC3-212ENST00000561218 DCAF11Q8TEB1 546 aa23.94■■□□□ 1.42
CRTC3-212ENST00000561218 POGKQ9P215 609 aa23.94■■□□□ 1.42
CRTC3-212ENST00000561218 RBM6P78332 1123 aaKnown RBP23.92■■□□□ 1.42
CRTC3-212ENST00000561218 PXDNQ92626 1479 aa23.92■■□□□ 1.42
CRTC3-212ENST00000561218 STAC3Q96MF2 364 aa23.9■■□□□ 1.42
CRTC3-212ENST00000561218 CDK12Q9NYV4 1490 aaPredicted RBP23.89■■□□□ 1.42
CRTC3-212ENST00000561218 USP21Q9UK80 565 aa23.89■■□□□ 1.41
CRTC3-212ENST00000561218 KRT28Q7Z3Y7 464 aa23.88■■□□□ 1.41
CRTC3-212ENST00000561218 PHF8Q9UPP1 1060 aa23.88■■□□□ 1.41
CRTC3-212ENST00000561218 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
CRTC3-212ENST00000561218 TRAK1Q9UPV9 953 aa23.87■■□□□ 1.41
CRTC3-212ENST00000561218 FNBP4Q8N3X1 1017 aaPredicted RBP23.86■■□□□ 1.41
CRTC3-212ENST00000561218 UPF1Q92900 1129 aaKnown RBP eCLIP23.86■■□□□ 1.41
CRTC3-212ENST00000561218 COL22A1Q8NFW1 1626 aaPredicted RBP23.85■■□□□ 1.41
CRTC3-212ENST00000561218 TRPC5Q9UL62 973 aaPredicted RBP23.85■■□□□ 1.41
CRTC3-212ENST00000561218 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
CRTC3-212ENST00000561218 PSME1Q06323 249 aa23.84■■□□□ 1.41
CRTC3-212ENST00000561218 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
CRTC3-212ENST00000561218 KIF1AQ12756 1690 aa23.82■■□□□ 1.4
CRTC3-212ENST00000561218 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
CRTC3-212ENST00000561218 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
CRTC3-212ENST00000561218 RGS12O14924 1447 aa23.8■■□□□ 1.4
CRTC3-212ENST00000561218 MINK1Q8N4C8 1332 aaPredicted RBP23.8■■□□□ 1.4
CRTC3-212ENST00000561218 HAP1P54257 671 aaPredicted RBP23.78■■□□□ 1.4
CRTC3-212ENST00000561218 LMOD2Q6P5Q4 547 aa23.78■■□□□ 1.4
CRTC3-212ENST00000561218 PMFBP1Q8TBY8 1022 aa23.78■■□□□ 1.4
CRTC3-212ENST00000561218 ANKARQ7Z5J8 1434 aa23.77■■□□□ 1.4
CRTC3-212ENST00000561218 ATRNO75882 1429 aa23.76■■□□□ 1.39
CRTC3-212ENST00000561218 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
CRTC3-212ENST00000561218 SBNO1A3KN83 1393 aa23.75■■□□□ 1.39
CRTC3-212ENST00000561218 EIF3AQ14152 1382 aaKnown RBP23.75■■□□□ 1.39
CRTC3-212ENST00000561218 TNS3Q68CZ2 1445 aa23.75■■□□□ 1.39
CRTC3-212ENST00000561218 RGPD8O14715 1765 aaPredicted RBP23.74■■□□□ 1.39
CRTC3-212ENST00000561218 WASLO00401 505 aaPredicted RBP23.74■■□□□ 1.39
CRTC3-212ENST00000561218 BCL9LQ86UU0 1499 aa23.74■■□□□ 1.39
CRTC3-212ENST00000561218 CABLES1Q8TDN4 633 aa23.72■■□□□ 1.39
CRTC3-212ENST00000561218 ADGRB2O60241 1585 aa23.72■■□□□ 1.39
CRTC3-212ENST00000561218 ARHGEF10O15013 1369 aa23.71■■□□□ 1.39
CRTC3-212ENST00000561218 UNC5CLQ8IV45 518 aa23.71■■□□□ 1.39
CRTC3-212ENST00000561218 PRR36Q9H6K5 1346 aa23.7■■□□□ 1.38
CRTC3-212ENST00000561218 GJD4Q96KN9 370 aaPredicted RBP23.7■■□□□ 1.38
CRTC3-212ENST00000561218 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
CRTC3-212ENST00000561218 NGDNQ8NEJ9 315 aaKnown RBP23.68■■□□□ 1.38
CRTC3-212ENST00000561218 USP32Q8NFA0 1604 aa23.68■■□□□ 1.38
CRTC3-212ENST00000561218 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
CRTC3-212ENST00000561218 ATAD2Q6PL18 1390 aa23.67■■□□□ 1.38
CRTC3-212ENST00000561218 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
CRTC3-212ENST00000561218 SLIT2O94813 1529 aa23.65■■□□□ 1.38
CRTC3-212ENST00000561218 NUDT16Q96DE0 195 aaKnown RBP23.64■■□□□ 1.37
CRTC3-212ENST00000561218 PAK3O75914 559 aaPredicted RBP23.62■■□□□ 1.37
CRTC3-212ENST00000561218 NBPF1Q3BBV0 1214 aa23.62■■□□□ 1.37
CRTC3-212ENST00000561218 CDK19Q9BWU1 502 aa23.62■■□□□ 1.37
CRTC3-212ENST00000561218 ARHGEF28Q8N1W1 1705 aaKnown RBP23.6■■□□□ 1.37
CRTC3-212ENST00000561218 FAM83GA6ND36 823 aa23.6■■□□□ 1.37
CRTC3-212ENST00000561218 CCDC9Q9Y3X0 531 aaKnown RBP23.6■■□□□ 1.37
CRTC3-212ENST00000561218 VPS72Q15906 364 aa23.59■■□□□ 1.37
CRTC3-212ENST00000561218 RALGAPBQ86X10 1494 aa23.59■■□□□ 1.37
CRTC3-212ENST00000561218 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.58■■□□□ 1.37
CRTC3-212ENST00000561218 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
CRTC3-212ENST00000561218 L3MBTL2Q969R5 705 aa23.56■■□□□ 1.36
CRTC3-212ENST00000561218 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
CRTC3-212ENST00000561218 ATP7BP35670 1465 aa23.56■■□□□ 1.36
CRTC3-212ENST00000561218 TRPM3Q9HCF6 1732 aaPredicted RBP23.55■■□□□ 1.36
CRTC3-212ENST00000561218 GLI3P10071 1580 aa23.53■■□□□ 1.36
CRTC3-212ENST00000561218 CCDC125Q86Z20 511 aa23.53■■□□□ 1.36
CRTC3-212ENST00000561218 SEPT12Q8IYM1 358 aa23.53■■□□□ 1.36
CRTC3-212ENST00000561218 SIN3AQ96ST3 1273 aa23.53■■□□□ 1.36
CRTC3-212ENST00000561218 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
CRTC3-212ENST00000561218 CENPJQ9HC77 1338 aaPredicted RBP23.53■■□□□ 1.36
CRTC3-212ENST00000561218 NEUROD1Q13562 356 aa23.52■■□□□ 1.36
CRTC3-212ENST00000561218 ABCA3Q99758 1704 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms