RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	TMEM132A	Q24JP5	1023 aa		12.32	□□□□□ -0.44
MARK3-223	ENST00000561071	ANKK1	Q8NFD2	765 aa		12.31	□□□□□ -0.44
MARK3-223	ENST00000561071	WNT2B	Q93097	391 aa		12.31	□□□□□ -0.44
MARK3-223	ENST00000561071	LRCH3	Q96II8	777 aa		12.31	□□□□□ -0.44
MARK3-223	ENST00000561071	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.31	□□□□□ -0.44
MARK3-223	ENST00000561071	BCAM	P50895	628 aa		12.3	□□□□□ -0.44
MARK3-223	ENST00000561071	SLF2	Q8IX21	1173 aa		12.3	□□□□□ -0.44
MARK3-223	ENST00000561071	GRIN2A	Q12879	1464 aa		12.29	□□□□□ -0.44
MARK3-223	ENST00000561071	ADAMTS12	P58397	1594 aa		12.27	□□□□□ -0.44
MARK3-223	ENST00000561071	SOWAHB	A6NEL2	793 aa		12.27	□□□□□ -0.45
MARK3-223	ENST00000561071	FHAD1	B1AJZ9	1412 aa		12.27	□□□□□ -0.45
MARK3-223	ENST00000561071	ERCC6L2	Q5T890	1561 aa		12.26	□□□□□ -0.45
MARK3-223	ENST00000561071	SLC4A3	P48751	1232 aa		12.26	□□□□□ -0.45
MARK3-223	ENST00000561071	KCTD12	Q96CX2	325 aa	Known RBP	12.26	□□□□□ -0.45
MARK3-223	ENST00000561071	CEP170	Q5SW79	1584 aa		12.26	□□□□□ -0.45
MARK3-223	ENST00000561071	HPS5	Q9UPZ3	1129 aa		12.25	□□□□□ -0.45
MARK3-223	ENST00000561071	GCGR	P47871	477 aa		12.24	□□□□□ -0.45
MARK3-223	ENST00000561071	NUP160	Q12769	1436 aa		12.24	□□□□□ -0.45
MARK3-223	ENST00000561071	RSPH4A	Q5TD94	716 aa		12.24	□□□□□ -0.45
MARK3-223	ENST00000561071	PCDH10	Q9P2E7	1040 aa		12.24	□□□□□ -0.45
MARK3-223	ENST00000561071	CFH	P08603	1231 aa		12.23	□□□□□ -0.45
MARK3-223	ENST00000561071	SPIRE2	Q8WWL2	714 aa		12.23	□□□□□ -0.45
MARK3-223	ENST00000561071	TBC1D2	Q9BYX2	928 aa		12.23	□□□□□ -0.45
MARK3-223	ENST00000561071	ERICH3	Q5RHP9	1530 aa		12.22	□□□□□ -0.45
MARK3-223	ENST00000561071	THSD4	Q6ZMP0	1018 aa		12.22	□□□□□ -0.45
MARK3-223	ENST00000561071	PPP4C	P60510	307 aa		12.21	□□□□□ -0.45
MARK3-223	ENST00000561071	NUTM1	Q86Y26	1132 aa		12.21	□□□□□ -0.45
MARK3-223	ENST00000561071	TSR3	Q9UJK0	312 aa	Known RBP	12.21	□□□□□ -0.45
MARK3-223	ENST00000561071	MYT1L	Q9UL68	1186 aa		12.21	□□□□□ -0.45
MARK3-223	ENST00000561071	MYSM1	Q5VVJ2	828 aa		12.2	□□□□□ -0.46
MARK3-223	ENST00000561071	WBP1L	Q9NX94	342 aa		12.2	□□□□□ -0.46
MARK3-223	ENST00000561071	KDM4A	O75164	1064 aa		12.19	□□□□□ -0.46
MARK3-223	ENST00000561071	SPNS2	Q8IVW8	549 aa		12.19	□□□□□ -0.46
MARK3-223	ENST00000561071	POLR3E	Q9NVU0	708 aa		12.18	□□□□□ -0.46
MARK3-223	ENST00000561071	SH3D19	Q5HYK7	790 aa		12.17	□□□□□ -0.46
MARK3-223	ENST00000561071	RSPH6A	Q9H0K4	717 aa		12.17	□□□□□ -0.46
MARK3-223	ENST00000561071	PRG4	Q92954	1404 aa	Predicted RBP	12.17	□□□□□ -0.46
MARK3-223	ENST00000561071	IGF1R	P08069	1367 aa		12.17	□□□□□ -0.46
MARK3-223	ENST00000561071	MOXD2P	A6NHM9	499 aa		12.16	□□□□□ -0.46
MARK3-223	ENST00000561071	APLP1	P51693	650 aa		12.16	□□□□□ -0.46
MARK3-223	ENST00000561071	PTPN5	P54829	565 aa		12.16	□□□□□ -0.46
MARK3-223	ENST00000561071	FUT2	Q10981	343 aa		12.16	□□□□□ -0.46
MARK3-223	ENST00000561071	KMT5B	Q4FZB7	885 aa		12.16	□□□□□ -0.46
MARK3-223	ENST00000561071	HLA-C	Q95604	372 aa		12.16	□□□□□ -0.46
MARK3-223	ENST00000561071	SHROOM2	Q13796	1616 aa		12.15	□□□□□ -0.46
MARK3-223	ENST00000561071	NDUFV2	P19404	249 aa		12.15	□□□□□ -0.46
MARK3-223	ENST00000561071	DIXDC1	Q155Q3	683 aa		12.15	□□□□□ -0.46
MARK3-223	ENST00000561071	NECTIN2	Q92692	538 aa		12.15	□□□□□ -0.46
MARK3-223	ENST00000561071	HOXA2	O43364	376 aa		12.14	□□□□□ -0.47
MARK3-223	ENST00000561071	SKIV2L	Q15477	1246 aa	Known RBP	12.14	□□□□□ -0.47
MARK3-223	ENST00000561071	GOPC	Q9HD26	462 aa		12.14	□□□□□ -0.47
MARK3-223	ENST00000561071	LIMD1	Q9UGP4	676 aa		12.14	□□□□□ -0.47
MARK3-223	ENST00000561071	KIF27	Q86VH2	1401 aa		12.13	□□□□□ -0.47
MARK3-223	ENST00000561071	GUCA2A	Q02747	115 aa		12.13	□□□□□ -0.47
MARK3-223	ENST00000561071	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.13	□□□□□ -0.47
MARK3-223	ENST00000561071	ACTN4	O43707	911 aa	Known RBP	12.12	□□□□□ -0.47
MARK3-223	ENST00000561071	CLK2	P49760	499 aa	Known RBP	12.12	□□□□□ -0.47
MARK3-223	ENST00000561071	USP46	P62068	366 aa		12.12	□□□□□ -0.47
MARK3-223	ENST00000561071	PUS10	Q3MIT2	529 aa	Known RBP	12.12	□□□□□ -0.47
MARK3-223	ENST00000561071	RIC3	Q7Z5B4	369 aa		12.12	□□□□□ -0.47
MARK3-223	ENST00000561071	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.11	□□□□□ -0.47
MARK3-223	ENST00000561071	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.11	□□□□□ -0.47
MARK3-223	ENST00000561071	ATP6V1A	P38606	617 aa		12.1	□□□□□ -0.47
MARK3-223	ENST00000561071	RNF166	Q96A37	237 aa	Predicted RBP	12.1	□□□□□ -0.47
MARK3-223	ENST00000561071	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.1	□□□□□ -0.47
MARK3-223	ENST00000561071	RUSC2	Q8N2Y8	1516 aa		12.1	□□□□□ -0.47
MARK3-223	ENST00000561071	SPTLC1	O15269	473 aa		12.09	□□□□□ -0.47
MARK3-223	ENST00000561071	PRR14	Q9BWN1	585 aa		12.09	□□□□□ -0.47
MARK3-223	ENST00000561071	CSPP1	Q1MSJ5	1256 aa		12.08	□□□□□ -0.48
MARK3-223	ENST00000561071	PCDHB15	Q9Y5E8	787 aa		12.08	□□□□□ -0.48
MARK3-223	ENST00000561071	CARMIL1	Q5VZK9	1371 aa		12.07	□□□□□ -0.48
MARK3-223	ENST00000561071	FDX1	P10109	184 aa		12.07	□□□□□ -0.48
MARK3-223	ENST00000561071	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
MARK3-223	ENST00000561071	PCDHGC3	Q9UN70	934 aa		12.07	□□□□□ -0.48
MARK3-223	ENST00000561071	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.07	□□□□□ -0.48
MARK3-223	ENST00000561071	GRIPAP1	Q4V328	841 aa		12.06	□□□□□ -0.48
MARK3-223	ENST00000561071	MORN1	Q5T089	497 aa		12.06	□□□□□ -0.48
MARK3-223	ENST00000561071	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.06	□□□□□ -0.48
MARK3-223	ENST00000561071	PCDHB3	Q9Y5E6	796 aa		12.06	□□□□□ -0.48
MARK3-223	ENST00000561071	KIAA0586	Q9BVV6	1533 aa		12.06	□□□□□ -0.48
MARK3-223	ENST00000561071	CUL7	Q14999	1698 aa		12.04	□□□□□ -0.48
MARK3-223	ENST00000561071	BLOC1S3	Q6QNY0	202 aa		12.04	□□□□□ -0.48
MARK3-223	ENST00000561071	SLC27A5	Q9Y2P5	690 aa		12.04	□□□□□ -0.48
MARK3-223	ENST00000561071	GJA5	P36382	358 aa		12.03	□□□□□ -0.48
MARK3-223	ENST00000561071	MMRN1	Q13201	1228 aa		12.03	□□□□□ -0.48
MARK3-223	ENST00000561071	QPCT	Q16769	361 aa		12.03	□□□□□ -0.48
MARK3-223	ENST00000561071	NYAP1	Q6ZVC0	841 aa		12.03	□□□□□ -0.48
MARK3-223	ENST00000561071	GTF3C3	Q9Y5Q9	886 aa		12.03	□□□□□ -0.48
MARK3-223	ENST00000561071	COPS2	P61201	443 aa		12.02	□□□□□ -0.49
MARK3-223	ENST00000561071	CABLES1	Q8TDN4	633 aa		12.02	□□□□□ -0.49
MARK3-223	ENST00000561071	TUSC1	Q2TAM9	212 aa		12.01	□□□□□ -0.49
MARK3-223	ENST00000561071	SYMPK	Q92797	1274 aa	Known RBP	12.01	□□□□□ -0.49
MARK3-223	ENST00000561071	FAM69C	Q0P6D2	419 aa		12	□□□□□ -0.49
MARK3-223	ENST00000561071	SCUBE3	Q8IX30	993 aa		12	□□□□□ -0.49
MARK3-223	ENST00000561071	LILRB3	O75022	631 aa		11.99	□□□□□ -0.49
MARK3-223	ENST00000561071	HRC	P23327	699 aa		11.99	□□□□□ -0.49
MARK3-223	ENST00000561071	HCST	Q9UBK5	93 aa		11.99	□□□□□ -0.49
MARK3-223	ENST00000561071	ADCY10	Q96PN6	1610 aa		11.99	□□□□□ -0.49
MARK3-223	ENST00000561071	PTPRG	P23470	1445 aa		11.98	□□□□□ -0.49
MARK3-223	ENST00000561071	RNF19B	Q6ZMZ0	732 aa		11.98	□□□□□ -0.49

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