RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
TPM1-227ENST00000560970 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
TPM1-227ENST00000560970 SPATA31E1Q6ZUB1 1445 aa16.09■□□□□ 0.17
TPM1-227ENST00000560970 PIK3C2GO75747 1445 aa16.08■□□□□ 0.16
TPM1-227ENST00000560970 MYOM2P54296 1465 aa16.08■□□□□ 0.16
TPM1-227ENST00000560970 UPF1Q92900 1129 aaKnown RBP eCLIP16.07■□□□□ 0.16
TPM1-227ENST00000560970 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
TPM1-227ENST00000560970 USP32Q8NFA0 1604 aa16.06■□□□□ 0.16
TPM1-227ENST00000560970 SOS2Q07890 1332 aaPredicted RBP16.06■□□□□ 0.16
TPM1-227ENST00000560970 C8orf37Q96NL8 207 aa16.06■□□□□ 0.16
TPM1-227ENST00000560970 ANKRD30BQ9BXX2 1392 aa16.04■□□□□ 0.16
TPM1-227ENST00000560970 EP400Q96L91 3159 aa16.04■□□□□ 0.16
TPM1-227ENST00000560970 ADGRB2O60241 1585 aa16.03■□□□□ 0.16
TPM1-227ENST00000560970 NWD2Q9ULI1 1742 aa16.02■□□□□ 0.16
TPM1-227ENST00000560970 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
TPM1-227ENST00000560970 NPHP3Q7Z494 1330 aa16.01■□□□□ 0.15
TPM1-227ENST00000560970 RBM6P78332 1123 aaKnown RBP16.01■□□□□ 0.15
TPM1-227ENST00000560970 ORAI2Q96SN7 254 aa16.01■□□□□ 0.15
TPM1-227ENST00000560970 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
TPM1-227ENST00000560970 ATRNO75882 1429 aa16.01■□□□□ 0.15
TPM1-227ENST00000560970 ADAMTS2O95450 1211 aa16■□□□□ 0.15
TPM1-227ENST00000560970 BRWD3Q6RI45 1802 aa16■□□□□ 0.15
TPM1-227ENST00000560970 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
TPM1-227ENST00000560970 FOXD1Q16676 465 aa15.99■□□□□ 0.15
TPM1-227ENST00000560970 YTHDC2Q9H6S0 1430 aaKnown RBP15.99■□□□□ 0.15
TPM1-227ENST00000560970 ATAD2Q6PL18 1390 aa15.99■□□□□ 0.15
TPM1-227ENST00000560970 ITSN1Q15811 1721 aa15.97■□□□□ 0.15
TPM1-227ENST00000560970 TRPM3Q9HCF6 1732 aaPredicted RBP15.97■□□□□ 0.15
TPM1-227ENST00000560970 GLI3P10071 1580 aa15.97■□□□□ 0.15
TPM1-227ENST00000560970 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
TPM1-227ENST00000560970 QTRT2Q9H974 415 aaKnown RBP15.97■□□□□ 0.15
TPM1-227ENST00000560970 DLC1Q96QB1 1528 aa15.97■□□□□ 0.15
TPM1-227ENST00000560970 ABCC11Q96J66 1382 aa15.97■□□□□ 0.15
TPM1-227ENST00000560970 NRAPQ86VF7 1730 aa15.97■□□□□ 0.15
TPM1-227ENST00000560970 PLEKHH1Q9ULM0 1364 aa15.96■□□□□ 0.15
TPM1-227ENST00000560970 CRYBG1Q9Y4K1 1723 aa15.96■□□□□ 0.15
TPM1-227ENST00000560970 USP21Q9UK80 565 aa15.95■□□□□ 0.14
TPM1-227ENST00000560970 ARHGEF28Q8N1W1 1705 aaKnown RBP15.94■□□□□ 0.14
TPM1-227ENST00000560970 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
TPM1-227ENST00000560970 TRPC5Q9UL62 973 aaPredicted RBP15.94■□□□□ 0.14
TPM1-227ENST00000560970 BCL9LQ86UU0 1499 aa15.94■□□□□ 0.14
TPM1-227ENST00000560970 ALS2Q96Q42 1657 aa15.94■□□□□ 0.14
TPM1-227ENST00000560970 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
TPM1-227ENST00000560970 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
TPM1-227ENST00000560970 TNS3Q68CZ2 1445 aa15.93■□□□□ 0.14
TPM1-227ENST00000560970 ADGRB1O14514 1584 aa15.92■□□□□ 0.14
TPM1-227ENST00000560970 RAB3GAP2Q9H2M9 1393 aa15.92■□□□□ 0.14
TPM1-227ENST00000560970 RGL3Q3MIN7 710 aa15.92■□□□□ 0.14
TPM1-227ENST00000560970 SLIT2O94813 1529 aa15.92■□□□□ 0.14
TPM1-227ENST00000560970 STK26Q9P289 416 aa15.91■□□□□ 0.14
TPM1-227ENST00000560970 ACIN1Q9UKV3 1341 aaKnown RBP15.91■□□□□ 0.14
TPM1-227ENST00000560970 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
TPM1-227ENST00000560970 FOXO3O43524 673 aa15.89■□□□□ 0.13
TPM1-227ENST00000560970 WAPLQ7Z5K2 1190 aa15.89■□□□□ 0.13
TPM1-227ENST00000560970 RALGAPBQ86X10 1494 aa15.89■□□□□ 0.13
TPM1-227ENST00000560970 COL14A1Q05707 1796 aaKnown RBP15.88■□□□□ 0.13
TPM1-227ENST00000560970 ANKARQ7Z5J8 1434 aa15.88■□□□□ 0.13
TPM1-227ENST00000560970 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
TPM1-227ENST00000560970 TOPAZ1Q8N9V7 1692 aa15.88■□□□□ 0.13
TPM1-227ENST00000560970 PHRF1Q9P1Y6 1649 aaKnown RBP15.87■□□□□ 0.13
TPM1-227ENST00000560970 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
TPM1-227ENST00000560970 TULP4Q9NRJ4 1543 aa15.87■□□□□ 0.13
TPM1-227ENST00000560970 SPATA31A3Q5VYP0 1347 aa15.87■□□□□ 0.13
TPM1-227ENST00000560970 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
TPM1-227ENST00000560970 RGPD1P0DJD0 1748 aa15.85■□□□□ 0.13
TPM1-227ENST00000560970 KIAA1210Q9ULL0 1709 aa15.85■□□□□ 0.13
TPM1-227ENST00000560970 SIRT1Q96EB6 747 aa15.84■□□□□ 0.13
TPM1-227ENST00000560970 C14orf93Q9H972 538 aaKnown RBP15.84■□□□□ 0.13
TPM1-227ENST00000560970 SBNO1A3KN83 1393 aa15.84■□□□□ 0.13
TPM1-227ENST00000560970 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
TPM1-227ENST00000560970 EIF3AQ14152 1382 aaKnown RBP15.83■□□□□ 0.12
TPM1-227ENST00000560970 LRP5O75197 1615 aa15.81■□□□□ 0.12
TPM1-227ENST00000560970 SRCAPQ6ZRS2 3230 aa15.81■□□□□ 0.12
TPM1-227ENST00000560970 GJD4Q96KN9 370 aaPredicted RBP15.81■□□□□ 0.12
TPM1-227ENST00000560970 TNS1Q9HBL0 1735 aaKnown RBP15.81■□□□□ 0.12
TPM1-227ENST00000560970 PHF8Q9UPP1 1060 aa15.81■□□□□ 0.12
TPM1-227ENST00000560970 THSD7AQ9UPZ6 1657 aa15.8■□□□□ 0.12
TPM1-227ENST00000560970 BLMP54132 1417 aaPredicted RBP15.8■□□□□ 0.12
TPM1-227ENST00000560970 CFAP70Q5T0N1 1121 aa15.79■□□□□ 0.12
TPM1-227ENST00000560970 KRT28Q7Z3Y7 464 aa15.79■□□□□ 0.12
TPM1-227ENST00000560970 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
TPM1-227ENST00000560970 PRAM1Q96QH2 718 aa15.79■□□□□ 0.12
TPM1-227ENST00000560970 ATP7BP35670 1465 aa15.78■□□□□ 0.12
TPM1-227ENST00000560970 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.12
TPM1-227ENST00000560970 PSME1Q06323 249 aa15.77■□□□□ 0.12
TPM1-227ENST00000560970 SAFB2Q14151 953 aaKnown RBP eCLIP15.76■□□□□ 0.11
TPM1-227ENST00000560970 CCDC125Q86Z20 511 aa15.76■□□□□ 0.11
TPM1-227ENST00000560970 HRCP23327 699 aa15.75■□□□□ 0.11
TPM1-227ENST00000560970 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
TPM1-227ENST00000560970 QRICH2Q9H0J4 1663 aa15.74■□□□□ 0.11
TPM1-227ENST00000560970 POGKQ9P215 609 aa15.74■□□□□ 0.11
TPM1-227ENST00000560970 VPS72Q15906 364 aa15.73■□□□□ 0.11
TPM1-227ENST00000560970 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
TPM1-227ENST00000560970 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
TPM1-227ENST00000560970 CABLES1Q8TDN4 633 aa15.72■□□□□ 0.11
TPM1-227ENST00000560970 WNK3Q9BYP7 1800 aa15.71■□□□□ 0.1
TPM1-227ENST00000560970 PRR36Q9H6K5 1346 aa15.7■□□□□ 0.1
TPM1-227ENST00000560970 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
TPM1-227ENST00000560970 PMFBP1Q8TBY8 1022 aa15.7■□□□□ 0.1
TPM1-227ENST00000560970 LMO7Q8WWI1 1683 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms