RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
ZEB1-220ENST00000560909 MYOM3Q5VTT5 1437 aa8.43□□□□□ -1.06
ZEB1-220ENST00000560909 RRBP1Q9P2E9 1410 aaKnown RBP8.43□□□□□ -1.06
ZEB1-220ENST00000560909 PPP4CP60510 307 aa8.42□□□□□ -1.06
ZEB1-220ENST00000560909 FAM98CQ17RN3 349 aaKnown RBP8.42□□□□□ -1.06
ZEB1-220ENST00000560909 PPARGC1BQ86YN6 1023 aaKnown RBP8.42□□□□□ -1.06
ZEB1-220ENST00000560909 NKX2-3Q8TAU0 364 aa8.42□□□□□ -1.06
ZEB1-220ENST00000560909 GPHNQ9NQX3 736 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-220ENST00000560909 DACH1Q9UI36 760 aa8.42□□□□□ -1.06
ZEB1-220ENST00000560909 STK24Q9Y6E0 443 aa8.42□□□□□ -1.06
ZEB1-220ENST00000560909 CCNB3Q8WWL7 1395 aa8.42□□□□□ -1.06
ZEB1-220ENST00000560909 KIF14Q15058 1648 aa8.42□□□□□ -1.06
ZEB1-220ENST00000560909 ABCA9Q8IUA7 1624 aa8.42□□□□□ -1.06
ZEB1-220ENST00000560909 SUPT6HQ7KZ85 1726 aaKnown RBP8.42□□□□□ -1.06
ZEB1-220ENST00000560909 FGD6Q6ZV73 1430 aa8.41□□□□□ -1.06
ZEB1-220ENST00000560909 SLC19A1P41440 591 aa8.41□□□□□ -1.06
ZEB1-220ENST00000560909 XP32Q5T750 250 aa8.41□□□□□ -1.06
ZEB1-220ENST00000560909 IFNLR1Q8IU57 520 aaPredicted RBP8.41□□□□□ -1.06
ZEB1-220ENST00000560909 DIP2BQ9P265 1576 aa8.4□□□□□ -1.06
ZEB1-220ENST00000560909 TCOF1Q13428 1488 aaKnown RBP8.4□□□□□ -1.06
ZEB1-220ENST00000560909 CD109Q6YHK3 1445 aa8.4□□□□□ -1.06
ZEB1-220ENST00000560909 FAM69CQ0P6D2 419 aa8.4□□□□□ -1.06
ZEB1-220ENST00000560909 TTC37Q6PGP7 1564 aa8.39□□□□□ -1.07
ZEB1-220ENST00000560909 KIAA1107Q9UPP5 1409 aa8.39□□□□□ -1.07
ZEB1-220ENST00000560909 EFCAB2Q5VUJ9 269 aa8.39□□□□□ -1.07
ZEB1-220ENST00000560909 CFDP1Q9UEE9 299 aaPredicted RBP8.39□□□□□ -1.07
ZEB1-220ENST00000560909 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
ZEB1-220ENST00000560909 TERTO14746 1132 aaKnown RBP8.38□□□□□ -1.07
ZEB1-220ENST00000560909 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
ZEB1-220ENST00000560909 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
ZEB1-220ENST00000560909 PPP1R37O75864 691 aa8.37□□□□□ -1.07
ZEB1-220ENST00000560909 RSPH4AQ5TD94 716 aa8.37□□□□□ -1.07
ZEB1-220ENST00000560909 SPRYD7Q5W111 196 aa8.37□□□□□ -1.07
ZEB1-220ENST00000560909 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
ZEB1-220ENST00000560909 TMUB1Q9BVT8 246 aa8.37□□□□□ -1.07
ZEB1-220ENST00000560909 NEO1Q92859 1461 aa8.37□□□□□ -1.07
ZEB1-220ENST00000560909 MBD5Q9P267 1494 aa8.37□□□□□ -1.07
ZEB1-220ENST00000560909 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
ZEB1-220ENST00000560909 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-220ENST00000560909 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-220ENST00000560909 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-220ENST00000560909 TRIM26Q12899 539 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-220ENST00000560909 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-220ENST00000560909 ANO8Q9HCE9 1232 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-220ENST00000560909 PLEKHH2Q8IVE3 1493 aa8.36□□□□□ -1.07
ZEB1-220ENST00000560909 PREX2Q70Z35 1606 aa8.36□□□□□ -1.07
ZEB1-220ENST00000560909 CDC42BPAQ5VT25 1732 aa8.34□□□□□ -1.07
ZEB1-220ENST00000560909 FANCAO15360 1455 aa8.34□□□□□ -1.07
ZEB1-220ENST00000560909 ONECUT3O60422 494 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-220ENST00000560909 CRIPAKQ8N1N5 446 aa8.34□□□□□ -1.07
ZEB1-220ENST00000560909 AKNAQ7Z591 1439 aa8.34□□□□□ -1.07
ZEB1-220ENST00000560909 CDC42BPBQ9Y5S2 1711 aa8.34□□□□□ -1.07
ZEB1-220ENST00000560909 ARHGEF12Q9NZN5 1544 aa8.34□□□□□ -1.08
ZEB1-220ENST00000560909 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.08
ZEB1-220ENST00000560909 ABCC5O15440 1437 aa8.33□□□□□ -1.08
ZEB1-220ENST00000560909 KIF13AQ9H1H9 1805 aa8.33□□□□□ -1.08
ZEB1-220ENST00000560909 ARHGAP5Q13017 1502 aa8.33□□□□□ -1.08
ZEB1-220ENST00000560909 PTPN23Q9H3S7 1636 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 CAMSAP2Q08AD1 1489 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 MYO5CQ9NQX4 1742 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 PTPRKQ15262 1439 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 GDF9O60383 454 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
ZEB1-220ENST00000560909 PPRC1Q5VV67 1664 aaKnown RBP8.32□□□□□ -1.08
ZEB1-220ENST00000560909 ARHGEF5Q12774 1597 aa8.31□□□□□ -1.08
ZEB1-220ENST00000560909 SCAPERQ9BY12 1400 aa8.31□□□□□ -1.08
ZEB1-220ENST00000560909 ABCC1P33527 1531 aa8.31□□□□□ -1.08
ZEB1-220ENST00000560909 HNRNPMP52272 730 aaKnown RBP eCLIP8.31□□□□□ -1.087e-6■■■■□ 22.9
ZEB1-220ENST00000560909 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
ZEB1-220ENST00000560909 TRAPPC8Q9Y2L5 1435 aa8.3□□□□□ -1.08
ZEB1-220ENST00000560909 FAM50AQ14320 339 aaKnown RBP8.3□□□□□ -1.08
ZEB1-220ENST00000560909 ZNF777Q9ULD5 760 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-220ENST00000560909 ROCK1Q13464 1354 aa8.3□□□□□ -1.08
ZEB1-220ENST00000560909 ADGRL1O94910 1474 aa8.3□□□□□ -1.08
ZEB1-220ENST00000560909 COL17A1Q9UMD9 1497 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-220ENST00000560909 SHANK2Q9UPX8 1470 aa8.3□□□□□ -1.08
ZEB1-220ENST00000560909 RTEL1-TNFRSF6BF6WH68 1400 aa8.29□□□□□ -1.08
ZEB1-220ENST00000560909 DAPK1P53355 1430 aa8.29□□□□□ -1.08
ZEB1-220ENST00000560909 POGZQ7Z3K3 1410 aa8.29□□□□□ -1.08
ZEB1-220ENST00000560909 KRTAP9-6A0A140TA67 174 aa8.29□□□□□ -1.08
ZEB1-220ENST00000560909 EVI5O60447 810 aa8.29□□□□□ -1.08
ZEB1-220ENST00000560909 CCDC141Q6ZP82 1450 aa8.29□□□□□ -1.08
ZEB1-220ENST00000560909 CFAP74Q9C0B2 1584 aa8.29□□□□□ -1.08
ZEB1-220ENST00000560909 DENND4BO75064 1496 aaPredicted RBP8.28□□□□□ -1.08
ZEB1-220ENST00000560909 ADGRL2O95490 1459 aa8.28□□□□□ -1.08
ZEB1-220ENST00000560909 MLH3Q9UHC1 1453 aa8.28□□□□□ -1.08
ZEB1-220ENST00000560909 AFAP1Q8N556 730 aa8.28□□□□□ -1.08
ZEB1-220ENST00000560909 DNMT1P26358 1616 aaKnown RBP8.28□□□□□ -1.08
ZEB1-220ENST00000560909 SYCP2Q9BX26 1530 aa8.28□□□□□ -1.08
ZEB1-220ENST00000560909 NCOA1Q15788 1441 aa8.28□□□□□ -1.08
ZEB1-220ENST00000560909 KDM5CP41229 1560 aa8.27□□□□□ -1.09
ZEB1-220ENST00000560909 ZNF518AQ6AHZ1 1483 aa8.27□□□□□ -1.09
ZEB1-220ENST00000560909 TSPY4P0CV99 314 aa8.27□□□□□ -1.09
ZEB1-220ENST00000560909 TSPY10P0CW01 314 aa8.27□□□□□ -1.09
ZEB1-220ENST00000560909 HRCP23327 699 aa8.27□□□□□ -1.09
ZEB1-220ENST00000560909 MAST1Q9Y2H9 1570 aa8.27□□□□□ -1.09
ZEB1-220ENST00000560909 TRIM6-TRIM34B2RNG4 842 aa8.26□□□□□ -1.09
ZEB1-220ENST00000560909 AXIN1O15169 862 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms