RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 SAFB2Q14151 953 aaKnown RBP eCLIP17.45■□□□□ 0.38
USP8-212ENST00000560730 BRINP3Q76B58 766 aa17.45■□□□□ 0.38
USP8-212ENST00000560730 PRAM1Q96QH2 718 aa17.45■□□□□ 0.38
USP8-212ENST00000560730 DLC1Q96QB1 1528 aa17.44■□□□□ 0.38
USP8-212ENST00000560730 PHLPP1O60346 1717 aa17.43■□□□□ 0.38
USP8-212ENST00000560730 C1orf167Q5SNV9 1468 aa17.43■□□□□ 0.38
USP8-212ENST00000560730 CDC42BPGQ6DT37 1551 aa17.42■□□□□ 0.38
USP8-212ENST00000560730 POGKQ9P215 609 aa17.41■□□□□ 0.38
USP8-212ENST00000560730 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
USP8-212ENST00000560730 ORAI2Q96SN7 254 aa17.4■□□□□ 0.38
USP8-212ENST00000560730 NUTM2FA1L443 756 aa17.39■□□□□ 0.38
USP8-212ENST00000560730 NBPF8Q3BBV2 869 aa17.39■□□□□ 0.38
USP8-212ENST00000560730 DDX17Q92841 729 aaKnown RBP17.39■□□□□ 0.38
USP8-212ENST00000560730 COL16A1Q07092 1604 aaPredicted RBP17.38■□□□□ 0.37
USP8-212ENST00000560730 AHDC1Q5TGY3 1603 aaPredicted RBP17.38■□□□□ 0.37
USP8-212ENST00000560730 TRPM1Q7Z4N2 1603 aa17.38■□□□□ 0.37
USP8-212ENST00000560730 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
USP8-212ENST00000560730 RGPD8O14715 1765 aaPredicted RBP17.38■□□□□ 0.37
USP8-212ENST00000560730 HIRIP3Q9BW71 556 aaPredicted RBP17.37■□□□□ 0.37
USP8-212ENST00000560730 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
USP8-212ENST00000560730 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
USP8-212ENST00000560730 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
USP8-212ENST00000560730 ESCO1Q5FWF5 840 aa17.34■□□□□ 0.37
USP8-212ENST00000560730 ADGRB2O60241 1585 aa17.33■□□□□ 0.36
USP8-212ENST00000560730 MED1Q15648 1581 aaPredicted RBP17.33■□□□□ 0.36
USP8-212ENST00000560730 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
USP8-212ENST00000560730 DISP3Q9P2K9 1392 aa17.31■□□□□ 0.36
USP8-212ENST00000560730 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
USP8-212ENST00000560730 JCADQ9P266 1359 aa17.3■□□□□ 0.36
USP8-212ENST00000560730 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
USP8-212ENST00000560730 FOXO3O43524 673 aa17.29■□□□□ 0.36
USP8-212ENST00000560730 PRR36Q9H6K5 1346 aa17.28■□□□□ 0.36
USP8-212ENST00000560730 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
USP8-212ENST00000560730 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
USP8-212ENST00000560730 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.36
USP8-212ENST00000560730 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.35
USP8-212ENST00000560730 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.35
USP8-212ENST00000560730 GPRASP1Q5JY77 1395 aa17.27■□□□□ 0.35
USP8-212ENST00000560730 QRICH2Q9H0J4 1663 aa17.27■□□□□ 0.35
USP8-212ENST00000560730 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
USP8-212ENST00000560730 LRRC59Q96AG4 307 aaKnown RBP17.26■□□□□ 0.35
USP8-212ENST00000560730 RALGAPBQ86X10 1494 aa17.25■□□□□ 0.35
USP8-212ENST00000560730 ANKARQ7Z5J8 1434 aa17.25■□□□□ 0.35
USP8-212ENST00000560730 CDK19Q9BWU1 502 aa17.25■□□□□ 0.35
USP8-212ENST00000560730 PHF8Q9UPP1 1060 aa17.25■□□□□ 0.35
USP8-212ENST00000560730 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
USP8-212ENST00000560730 PXDNQ92626 1479 aa17.25■□□□□ 0.35
USP8-212ENST00000560730 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
USP8-212ENST00000560730 KIF1AQ12756 1690 aa17.24■□□□□ 0.35
USP8-212ENST00000560730 PMFBP1Q8TBY8 1022 aa17.23■□□□□ 0.35
USP8-212ENST00000560730 CARD11Q9BXL7 1154 aa17.23■□□□□ 0.35
USP8-212ENST00000560730 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
USP8-212ENST00000560730 LRP6O75581 1613 aa17.22■□□□□ 0.35
USP8-212ENST00000560730 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
USP8-212ENST00000560730 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
USP8-212ENST00000560730 ATP7BP35670 1465 aa17.21■□□□□ 0.35
USP8-212ENST00000560730 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
USP8-212ENST00000560730 NUTM2BA6NNL0 878 aaPredicted RBP17.21■□□□□ 0.34
USP8-212ENST00000560730 NUTM2EB1AL46 878 aaPredicted RBP17.21■□□□□ 0.34
USP8-212ENST00000560730 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.34
USP8-212ENST00000560730 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.34
USP8-212ENST00000560730 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
USP8-212ENST00000560730 ITSN1Q15811 1721 aa17.18■□□□□ 0.34
USP8-212ENST00000560730 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
USP8-212ENST00000560730 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
USP8-212ENST00000560730 RGS17Q9UGC6 210 aaPredicted RBP17.18■□□□□ 0.34
USP8-212ENST00000560730 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
USP8-212ENST00000560730 PSME1Q06323 249 aa17.17■□□□□ 0.34
USP8-212ENST00000560730 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
USP8-212ENST00000560730 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
USP8-212ENST00000560730 COL22A1Q8NFW1 1626 aaPredicted RBP17.15■□□□□ 0.34
USP8-212ENST00000560730 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
USP8-212ENST00000560730 CCDC61Q9Y6R9 512 aa17.14■□□□□ 0.33
USP8-212ENST00000560730 EVC2Q86UK5 1308 aa17.14■□□□□ 0.33
USP8-212ENST00000560730 TRPM3Q9HCF6 1732 aaPredicted RBP17.14■□□□□ 0.33
USP8-212ENST00000560730 MEX3CQ5U5Q3 659 aaKnown RBP17.13■□□□□ 0.33
USP8-212ENST00000560730 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
USP8-212ENST00000560730 ACEP12821 1306 aa17.12■□□□□ 0.33
USP8-212ENST00000560730 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
USP8-212ENST00000560730 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
USP8-212ENST00000560730 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
USP8-212ENST00000560730 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
USP8-212ENST00000560730 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
USP8-212ENST00000560730 ADAMTS2O95450 1211 aa17.11■□□□□ 0.33
USP8-212ENST00000560730 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
USP8-212ENST00000560730 SBNO2Q9Y2G9 1366 aa17.1■□□□□ 0.33
USP8-212ENST00000560730 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
USP8-212ENST00000560730 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
USP8-212ENST00000560730 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
USP8-212ENST00000560730 ALS2Q96Q42 1657 aa17.09■□□□□ 0.33
USP8-212ENST00000560730 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
USP8-212ENST00000560730 TESK2Q96S53 571 aa17.09■□□□□ 0.33
USP8-212ENST00000560730 C8orf37Q96NL8 207 aa17.08■□□□□ 0.32
USP8-212ENST00000560730 USP47Q96K76 1375 aa17.07■□□□□ 0.32
USP8-212ENST00000560730 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
USP8-212ENST00000560730 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
USP8-212ENST00000560730 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
USP8-212ENST00000560730 AFF2P51816 1311 aa17.06■□□□□ 0.32
USP8-212ENST00000560730 ABCA3Q99758 1704 aa17.06■□□□□ 0.32
USP8-212ENST00000560730 NGLY1Q96IV0 654 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms