RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
SMAD3-213ENST00000560175 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
SMAD3-213ENST00000560175 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
SMAD3-213ENST00000560175 JCADQ9P266 1359 aa19.21■□□□□ 0.67
SMAD3-213ENST00000560175 SHPRHQ149N8 1683 aa19.18■□□□□ 0.66
SMAD3-213ENST00000560175 ORAI2Q96SN7 254 aa19.18■□□□□ 0.66
SMAD3-213ENST00000560175 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
SMAD3-213ENST00000560175 FMN2Q9NZ56 1722 aa19.17■□□□□ 0.66
SMAD3-213ENST00000560175 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
SMAD3-213ENST00000560175 L3MBTL2Q969R5 705 aa19.16■□□□□ 0.66
SMAD3-213ENST00000560175 PRAM1Q96QH2 718 aa19.16■□□□□ 0.66
SMAD3-213ENST00000560175 SOS2Q07890 1332 aaPredicted RBP19.15■□□□□ 0.66
SMAD3-213ENST00000560175 LRRC59Q96AG4 307 aaKnown RBP19.14■□□□□ 0.65
SMAD3-213ENST00000560175 SPATA31A6Q5VVP1 1343 aa19.14■□□□□ 0.65
SMAD3-213ENST00000560175 ADGRB2O60241 1585 aa19.14■□□□□ 0.65
SMAD3-213ENST00000560175 DDX17Q92841 729 aaKnown RBP19.13■□□□□ 0.65
SMAD3-213ENST00000560175 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
SMAD3-213ENST00000560175 ARHGEF28Q8N1W1 1705 aaKnown RBP19.12■□□□□ 0.65
SMAD3-213ENST00000560175 RGS17Q9UGC6 210 aaPredicted RBP19.12■□□□□ 0.65
SMAD3-213ENST00000560175 POGKQ9P215 609 aa19.11■□□□□ 0.65
SMAD3-213ENST00000560175 RGPD8O14715 1765 aaPredicted RBP19.11■□□□□ 0.65
SMAD3-213ENST00000560175 NBPF1Q3BBV0 1214 aa19.1■□□□□ 0.65
SMAD3-213ENST00000560175 ESCO1Q5FWF5 840 aa19.1■□□□□ 0.65
SMAD3-213ENST00000560175 PXDNQ92626 1479 aa19.08■□□□□ 0.64
SMAD3-213ENST00000560175 LRP6O75581 1613 aa19.07■□□□□ 0.64
SMAD3-213ENST00000560175 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
SMAD3-213ENST00000560175 NPHP3Q7Z494 1330 aa19.07■□□□□ 0.64
SMAD3-213ENST00000560175 NEUROD1Q13562 356 aa19.07■□□□□ 0.64
SMAD3-213ENST00000560175 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMAD3-213ENST00000560175 KIF1AQ12756 1690 aa19.07■□□□□ 0.64
SMAD3-213ENST00000560175 ANKARQ7Z5J8 1434 aa19.07■□□□□ 0.64
SMAD3-213ENST00000560175 USP32Q8NFA0 1604 aa19.07■□□□□ 0.64
SMAD3-213ENST00000560175 TRPM1Q7Z4N2 1603 aa19.05■□□□□ 0.64
SMAD3-213ENST00000560175 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
SMAD3-213ENST00000560175 FOXO3O43524 673 aa19.05■□□□□ 0.64
SMAD3-213ENST00000560175 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
SMAD3-213ENST00000560175 WASLO00401 505 aaPredicted RBP19.04■□□□□ 0.64
SMAD3-213ENST00000560175 COL22A1Q8NFW1 1626 aaPredicted RBP19.03■□□□□ 0.64
SMAD3-213ENST00000560175 MINK1Q8N4C8 1332 aaPredicted RBP19.02■□□□□ 0.64
SMAD3-213ENST00000560175 PHF8Q9UPP1 1060 aa19.02■□□□□ 0.64
SMAD3-213ENST00000560175 TULP4Q9NRJ4 1543 aa19.01■□□□□ 0.63
SMAD3-213ENST00000560175 HIRIP3Q9BW71 556 aaPredicted RBP19.01■□□□□ 0.63
SMAD3-213ENST00000560175 EIF3AQ14152 1382 aaKnown RBP19.01■□□□□ 0.63
SMAD3-213ENST00000560175 PRR36Q9H6K5 1346 aa19■□□□□ 0.63
SMAD3-213ENST00000560175 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
SMAD3-213ENST00000560175 SOCS7O14512 581 aa18.99■□□□□ 0.63
SMAD3-213ENST00000560175 POTEAQ6S8J7 498 aa18.99■□□□□ 0.63
SMAD3-213ENST00000560175 GPRASP1Q5JY77 1395 aa18.98■□□□□ 0.63
SMAD3-213ENST00000560175 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
SMAD3-213ENST00000560175 SPATA31A3Q5VYP0 1347 aa18.98■□□□□ 0.63
SMAD3-213ENST00000560175 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
SMAD3-213ENST00000560175 ATP7BP35670 1465 aa18.96■□□□□ 0.63
SMAD3-213ENST00000560175 SBNO1A3KN83 1393 aa18.95■□□□□ 0.62
SMAD3-213ENST00000560175 NUTM2BA6NNL0 878 aaPredicted RBP18.95■□□□□ 0.62
SMAD3-213ENST00000560175 NUTM2EB1AL46 878 aaPredicted RBP18.95■□□□□ 0.62
SMAD3-213ENST00000560175 XPCQ01831 940 aaPredicted RBP18.95■□□□□ 0.62
SMAD3-213ENST00000560175 NUTM2AQ8IVF1 878 aaPredicted RBP18.95■□□□□ 0.62
SMAD3-213ENST00000560175 CDK19Q9BWU1 502 aa18.95■□□□□ 0.62
SMAD3-213ENST00000560175 PSME1Q06323 249 aa18.94■□□□□ 0.62
SMAD3-213ENST00000560175 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
SMAD3-213ENST00000560175 ITSN1Q15811 1721 aa18.94■□□□□ 0.62
SMAD3-213ENST00000560175 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
SMAD3-213ENST00000560175 ZNF772Q68DY9 489 aaPredicted RBP18.93■□□□□ 0.62
SMAD3-213ENST00000560175 PMFBP1Q8TBY8 1022 aa18.93■□□□□ 0.62
SMAD3-213ENST00000560175 TRPM3Q9HCF6 1732 aaPredicted RBP18.93■□□□□ 0.62
SMAD3-213ENST00000560175 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
SMAD3-213ENST00000560175 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
SMAD3-213ENST00000560175 MEX3CQ5U5Q3 659 aaKnown RBP18.92■□□□□ 0.62
SMAD3-213ENST00000560175 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
SMAD3-213ENST00000560175 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
SMAD3-213ENST00000560175 PLEKHG3A1L390 1219 aa18.91■□□□□ 0.62
SMAD3-213ENST00000560175 CCDC61Q9Y6R9 512 aa18.91■□□□□ 0.62
SMAD3-213ENST00000560175 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
SMAD3-213ENST00000560175 TNS3Q68CZ2 1445 aa18.91■□□□□ 0.62
SMAD3-213ENST00000560175 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
SMAD3-213ENST00000560175 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
SMAD3-213ENST00000560175 POLR3AO14802 1390 aaPredicted RBP18.9■□□□□ 0.62
SMAD3-213ENST00000560175 FNBP4Q8N3X1 1017 aaPredicted RBP18.89■□□□□ 0.61
SMAD3-213ENST00000560175 ALS2Q96Q42 1657 aa18.89■□□□□ 0.61
SMAD3-213ENST00000560175 AFF2P51816 1311 aa18.88■□□□□ 0.61
SMAD3-213ENST00000560175 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
SMAD3-213ENST00000560175 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
SMAD3-213ENST00000560175 SBNO2Q9Y2G9 1366 aa18.86■□□□□ 0.61
SMAD3-213ENST00000560175 ADAMTS2O95450 1211 aa18.86■□□□□ 0.61
SMAD3-213ENST00000560175 C8orf37Q96NL8 207 aa18.86■□□□□ 0.61
SMAD3-213ENST00000560175 NGDNQ8NEJ9 315 aaKnown RBP18.85■□□□□ 0.61
SMAD3-213ENST00000560175 NGLY1Q96IV0 654 aa18.84■□□□□ 0.61
SMAD3-213ENST00000560175 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
SMAD3-213ENST00000560175 ABCA3Q99758 1704 aa18.83■□□□□ 0.61
SMAD3-213ENST00000560175 ACEP12821 1306 aa18.83■□□□□ 0.61
SMAD3-213ENST00000560175 EVC2Q86UK5 1308 aa18.83■□□□□ 0.61
SMAD3-213ENST00000560175 CABP2Q9NPB3 220 aa18.82■□□□□ 0.6
SMAD3-213ENST00000560175 CDK12Q9NYV4 1490 aaPredicted RBP18.82■□□□□ 0.6
SMAD3-213ENST00000560175 CRYBG1Q9Y4K1 1723 aa18.81■□□□□ 0.6
SMAD3-213ENST00000560175 SRPK2P78362 688 aaKnown RBP18.81■□□□□ 0.6
SMAD3-213ENST00000560175 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
SMAD3-213ENST00000560175 BCL9LQ86UU0 1499 aa18.81■□□□□ 0.6
SMAD3-213ENST00000560175 RXRBP28702 533 aa18.8■□□□□ 0.6
SMAD3-213ENST00000560175 PPIP5K1Q6PFW1 1433 aa18.8■□□□□ 0.6
SMAD3-213ENST00000560175 BRD4O60885 1362 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms