RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 GPCPD1Q9NPB8 672 aa9.17□□□□□ -0.94
CASC4-206ENST00000558847 PDE4DQ08499 809 aa9.16□□□□□ -0.94
CASC4-206ENST00000558847 FCF1Q9Y324 198 aaKnown RBP9.16□□□□□ -0.94
CASC4-206ENST00000558847 GDF9O60383 454 aa9.15□□□□□ -0.94
CASC4-206ENST00000558847 MYT1Q01538 1121 aa9.15□□□□□ -0.94
CASC4-206ENST00000558847 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
CASC4-206ENST00000558847 FAM217BQ9NTX9 383 aaPredicted RBP9.15□□□□□ -0.94
CASC4-206ENST00000558847 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
CASC4-206ENST00000558847 THAP11Q96EK4 314 aa9.14□□□□□ -0.95
CASC4-206ENST00000558847 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
CASC4-206ENST00000558847 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
CASC4-206ENST00000558847 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
CASC4-206ENST00000558847 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
CASC4-206ENST00000558847 CD46P15529 392 aa9.12□□□□□ -0.95
CASC4-206ENST00000558847 RPIAP49247 311 aa9.12□□□□□ -0.95
CASC4-206ENST00000558847 BRICD5Q6PL45 260 aa9.11□□□□□ -0.95
CASC4-206ENST00000558847 RNF19BQ6ZMZ0 732 aa9.11□□□□□ -0.95
CASC4-206ENST00000558847 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
CASC4-206ENST00000558847 Q3C1V9 767 aa9.1□□□□□ -0.95
CASC4-206ENST00000558847 MS4A1P11836 297 aa9.09□□□□□ -0.95
CASC4-206ENST00000558847 GPBP1L1Q9HC44 474 aaPredicted RBP9.09□□□□□ -0.95
CASC4-206ENST00000558847 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
CASC4-206ENST00000558847 KDM4AO75164 1064 aa9.08□□□□□ -0.96
CASC4-206ENST00000558847 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
CASC4-206ENST00000558847 SSTR3P32745 418 aaPredicted RBP9.07□□□□□ -0.96
CASC4-206ENST00000558847 BRPF1P55201 1214 aaPredicted RBP9.07□□□□□ -0.96
CASC4-206ENST00000558847 MSS51Q4VC12 460 aa9.07□□□□□ -0.96
CASC4-206ENST00000558847 GTF3C3Q9Y5Q9 886 aa9.07□□□□□ -0.96
CASC4-206ENST00000558847 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
CASC4-206ENST00000558847 NEUROD2Q15784 382 aa9.06□□□□□ -0.96
CASC4-206ENST00000558847 ZNF775Q96BV0 537 aaPredicted RBP9.06□□□□□ -0.96
CASC4-206ENST00000558847 KDM4CQ9H3R0 1056 aa9.06□□□□□ -0.96
CASC4-206ENST00000558847 TTC24A2A3L6 582 aaPredicted RBP9.04□□□□□ -0.96
CASC4-206ENST00000558847 POTECB2RU33 542 aa9.04□□□□□ -0.96
CASC4-206ENST00000558847 USB1Q9BQ65 265 aaKnown RBP9.04□□□□□ -0.96
CASC4-206ENST00000558847 AAASQ9NRG9 546 aa9.04□□□□□ -0.96
CASC4-206ENST00000558847 USP46P62068 366 aa9.03□□□□□ -0.96
CASC4-206ENST00000558847 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
CASC4-206ENST00000558847 HLA-CQ95604 372 aa9.02□□□□□ -0.97
CASC4-206ENST00000558847 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.97
CASC4-206ENST00000558847 BEGAINQ9BUH8 593 aa9.01□□□□□ -0.97
CASC4-206ENST00000558847 AXIN1O15169 862 aa9□□□□□ -0.97
CASC4-206ENST00000558847 MMP16P51512 607 aa9□□□□□ -0.97
CASC4-206ENST00000558847 TRIM32Q13049 653 aa9□□□□□ -0.97
CASC4-206ENST00000558847 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
CASC4-206ENST00000558847 HOXA2O43364 376 aa8.99□□□□□ -0.97
CASC4-206ENST00000558847 GUCA2AQ02747 115 aa8.99□□□□□ -0.97
CASC4-206ENST00000558847 PLEKHG3A1L390 1219 aa8.98□□□□□ -0.97
CASC4-206ENST00000558847 SPIRE2Q8WWL2 714 aa8.98□□□□□ -0.97
CASC4-206ENST00000558847 FAM117AQ9C073 453 aa8.98□□□□□ -0.97
CASC4-206ENST00000558847 WNT7AO00755 349 aa8.97□□□□□ -0.97
CASC4-206ENST00000558847 DXOO77932 396 aaKnown RBP8.97□□□□□ -0.97
CASC4-206ENST00000558847 CTC1Q2NKJ3 1217 aa8.96□□□□□ -0.98
CASC4-206ENST00000558847 SNIP1Q8TAD8 396 aaKnown RBP8.96□□□□□ -0.98
CASC4-206ENST00000558847 TBC1D2Q9BYX2 928 aa8.96□□□□□ -0.98
CASC4-206ENST00000558847 DACH1Q9UI36 760 aa8.96□□□□□ -0.98
CASC4-206ENST00000558847 AVPP01185 164 aa8.95□□□□□ -0.98
CASC4-206ENST00000558847 CRIPAKQ8N1N5 446 aa8.95□□□□□ -0.98
CASC4-206ENST00000558847 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
CASC4-206ENST00000558847 MRGPRX2Q96LB1 330 aa8.95□□□□□ -0.98
CASC4-206ENST00000558847 DDRGK1Q96HY6 314 aa8.94□□□□□ -0.98
CASC4-206ENST00000558847 MOXD2PA6NHM9 499 aa8.93□□□□□ -0.98
CASC4-206ENST00000558847 C11orf95C9JLR9 678 aaPredicted RBP8.93□□□□□ -0.98
CASC4-206ENST00000558847 JUNDP17535 347 aa8.93□□□□□ -0.98
CASC4-206ENST00000558847 MYSM1Q5VVJ2 828 aa8.93□□□□□ -0.98
CASC4-206ENST00000558847 GMPR2Q9P2T1 348 aaKnown RBP8.93□□□□□ -0.98
CASC4-206ENST00000558847 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
CASC4-206ENST00000558847 FDX1P10109 184 aa8.92□□□□□ -0.98
CASC4-206ENST00000558847 J3QL48 77 aa8.91□□□□□ -0.98
CASC4-206ENST00000558847 SMPD1P17405 629 aa8.91□□□□□ -0.98
CASC4-206ENST00000558847 NDUFV2P19404 249 aa8.91□□□□□ -0.98
CASC4-206ENST00000558847 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
CASC4-206ENST00000558847 RSBN1LQ6PCB5 846 aaPredicted RBP8.91□□□□□ -0.98
CASC4-206ENST00000558847 RETREG3Q86VR2 466 aa8.91□□□□□ -0.98
CASC4-206ENST00000558847 PCDHGC3Q9UN70 934 aa8.91□□□□□ -0.98
CASC4-206ENST00000558847 GJA5P36382 358 aa8.9□□□□□ -0.98
CASC4-206ENST00000558847 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.98
CASC4-206ENST00000558847 DIXDC1Q155Q3 683 aa8.9□□□□□ -0.98
CASC4-206ENST00000558847 SPTLC1O15269 473 aa8.89□□□□□ -0.99
CASC4-206ENST00000558847 WNT7BP56706 349 aa8.89□□□□□ -0.99
CASC4-206ENST00000558847 SH3D19Q5HYK7 790 aa8.89□□□□□ -0.99
CASC4-206ENST00000558847 NUDT12Q9BQG2 462 aa8.89□□□□□ -0.99
CASC4-206ENST00000558847 SKOR1P84550 965 aa8.88□□□□□ -0.99
CASC4-206ENST00000558847 LIMD1Q9UGP4 676 aa8.88□□□□□ -0.99
CASC4-206ENST00000558847 TIMELESSQ9UNS1 1208 aa8.88□□□□□ -0.99
CASC4-206ENST00000558847 ALDH1A1P00352 501 aa8.87□□□□□ -0.99
CASC4-206ENST00000558847 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
CASC4-206ENST00000558847 CLK2P49760 499 aaKnown RBP8.86□□□□□ -0.99
CASC4-206ENST00000558847 RIC3Q7Z5B4 369 aa8.86□□□□□ -0.99
CASC4-206ENST00000558847 C14orf37Q86TY3 774 aa8.86□□□□□ -0.99
CASC4-206ENST00000558847 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
CASC4-206ENST00000558847 HPS1Q92902 700 aa8.86□□□□□ -0.99
CASC4-206ENST00000558847 RSPH6AQ9H0K4 717 aa8.86□□□□□ -0.99
CASC4-206ENST00000558847 ATP13A2Q9NQ11 1180 aa8.86□□□□□ -0.99
CASC4-206ENST00000558847 TUSC1Q2TAM9 212 aa8.85□□□□□ -0.99
CASC4-206ENST00000558847 EHBP1Q8NDI1 1231 aa8.85□□□□□ -0.99
CASC4-206ENST00000558847 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
CASC4-206ENST00000558847 CCNYL3P0C7X3 344 aa8.84□□□□□ -0.99
CASC4-206ENST00000558847 SKIV2LQ15477 1246 aaKnown RBP8.84□□□□□ -0.99
CASC4-206ENST00000558847 PTCRAQ6ISU1 281 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms