RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 HFM1A2PYH4 1435 aa16.71■□□□□ 0.27
RABGGTA-204ENST00000558376 COL22A1Q8NFW1 1626 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-204ENST00000558376 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-204ENST00000558376 ATRNO75882 1429 aa16.7■□□□□ 0.26
RABGGTA-204ENST00000558376 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
RABGGTA-204ENST00000558376 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
RABGGTA-204ENST00000558376 MYOM2P54296 1465 aa16.68■□□□□ 0.26
RABGGTA-204ENST00000558376 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
RABGGTA-204ENST00000558376 FOXD1Q16676 465 aa16.68■□□□□ 0.26
RABGGTA-204ENST00000558376 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
RABGGTA-204ENST00000558376 PXDNQ92626 1479 aa16.67■□□□□ 0.26
RABGGTA-204ENST00000558376 FOXO3O43524 673 aa16.67■□□□□ 0.26
RABGGTA-204ENST00000558376 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
RABGGTA-204ENST00000558376 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
RABGGTA-204ENST00000558376 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
RABGGTA-204ENST00000558376 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-204ENST00000558376 STK26Q9P289 416 aa16.65■□□□□ 0.26
RABGGTA-204ENST00000558376 BCL9LQ86UU0 1499 aa16.65■□□□□ 0.26
RABGGTA-204ENST00000558376 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
RABGGTA-204ENST00000558376 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
RABGGTA-204ENST00000558376 RGL3Q3MIN7 710 aa16.63■□□□□ 0.25
RABGGTA-204ENST00000558376 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
RABGGTA-204ENST00000558376 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
RABGGTA-204ENST00000558376 LRPPRCP42704 1394 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-204ENST00000558376 EP400Q96L91 3159 aa16.61■□□□□ 0.25
RABGGTA-204ENST00000558376 GJD4Q96KN9 370 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-204ENST00000558376 TECPR2O15040 1411 aa16.61■□□□□ 0.25
RABGGTA-204ENST00000558376 SPATA31E1Q6ZUB1 1445 aa16.6■□□□□ 0.25
RABGGTA-204ENST00000558376 IFT172Q9UG01 1749 aa16.6■□□□□ 0.25
RABGGTA-204ENST00000558376 ABCC11Q96J66 1382 aa16.6■□□□□ 0.25
RABGGTA-204ENST00000558376 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
RABGGTA-204ENST00000558376 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
RABGGTA-204ENST00000558376 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
RABGGTA-204ENST00000558376 KNDC1Q76NI1 1749 aa16.58■□□□□ 0.24
RABGGTA-204ENST00000558376 CCDC144AA2RUR9 1427 aa16.57■□□□□ 0.24
RABGGTA-204ENST00000558376 RGPD8O14715 1765 aaPredicted RBP16.57■□□□□ 0.24
RABGGTA-204ENST00000558376 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-204ENST00000558376 CCDC125Q86Z20 511 aa16.56■□□□□ 0.24
RABGGTA-204ENST00000558376 UNC5CLQ8IV45 518 aa16.56■□□□□ 0.24
RABGGTA-204ENST00000558376 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
RABGGTA-204ENST00000558376 GLI3P10071 1580 aa16.56■□□□□ 0.24
RABGGTA-204ENST00000558376 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
RABGGTA-204ENST00000558376 MPHOSPH9Q99550 1183 aa16.56■□□□□ 0.24
RABGGTA-204ENST00000558376 SLIT2O94813 1529 aa16.56■□□□□ 0.24
RABGGTA-204ENST00000558376 RALGAPBQ86X10 1494 aa16.55■□□□□ 0.24
RABGGTA-204ENST00000558376 BRWD3Q6RI45 1802 aa16.55■□□□□ 0.24
RABGGTA-204ENST00000558376 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
RABGGTA-204ENST00000558376 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
RABGGTA-204ENST00000558376 KIF1AQ12756 1690 aa16.54■□□□□ 0.24
RABGGTA-204ENST00000558376 SIRT1Q96EB6 747 aa16.53■□□□□ 0.24
RABGGTA-204ENST00000558376 CABLES1Q8TDN4 633 aa16.52■□□□□ 0.24
RABGGTA-204ENST00000558376 USP32Q8NFA0 1604 aa16.51■□□□□ 0.23
RABGGTA-204ENST00000558376 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
RABGGTA-204ENST00000558376 PHF8Q9UPP1 1060 aa16.51■□□□□ 0.23
RABGGTA-204ENST00000558376 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
RABGGTA-204ENST00000558376 CFAP70Q5T0N1 1121 aa16.5■□□□□ 0.23
RABGGTA-204ENST00000558376 DEFB132Q7Z7B7 95 aa16.49■□□□□ 0.23
RABGGTA-204ENST00000558376 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
RABGGTA-204ENST00000558376 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
RABGGTA-204ENST00000558376 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
RABGGTA-204ENST00000558376 PSME1Q06323 249 aa16.48■□□□□ 0.23
RABGGTA-204ENST00000558376 VPS72Q15906 364 aa16.48■□□□□ 0.23
RABGGTA-204ENST00000558376 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
RABGGTA-204ENST00000558376 ONECUT3O60422 494 aaPredicted RBP16.46■□□□□ 0.23
RABGGTA-204ENST00000558376 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.23
RABGGTA-204ENST00000558376 PLCH1Q4KWH8 1693 aa16.46■□□□□ 0.23
RABGGTA-204ENST00000558376 NRXN1Q9ULB1 1477 aa16.46■□□□□ 0.23
RABGGTA-204ENST00000558376 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
RABGGTA-204ENST00000558376 DHX57Q6P158 1386 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-204ENST00000558376 PRAM1Q96QH2 718 aa16.46■□□□□ 0.22
RABGGTA-204ENST00000558376 ABCA3Q99758 1704 aa16.46■□□□□ 0.22
RABGGTA-204ENST00000558376 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
RABGGTA-204ENST00000558376 FAM83GA6ND36 823 aa16.45■□□□□ 0.22
RABGGTA-204ENST00000558376 LMOD2Q6P5Q4 547 aa16.45■□□□□ 0.22
RABGGTA-204ENST00000558376 PMFBP1Q8TBY8 1022 aa16.44■□□□□ 0.22
RABGGTA-204ENST00000558376 CCDC9Q9Y3X0 531 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-204ENST00000558376 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
RABGGTA-204ENST00000558376 ARHGEF10O15013 1369 aa16.41■□□□□ 0.22
RABGGTA-204ENST00000558376 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-204ENST00000558376 POGKQ9P215 609 aa16.41■□□□□ 0.22
RABGGTA-204ENST00000558376 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
RABGGTA-204ENST00000558376 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-204ENST00000558376 ANKARQ7Z5J8 1434 aa16.39■□□□□ 0.21
RABGGTA-204ENST00000558376 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
RABGGTA-204ENST00000558376 HIRIP3Q9BW71 556 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-204ENST00000558376 PRR36Q9H6K5 1346 aa16.38■□□□□ 0.21
RABGGTA-204ENST00000558376 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
RABGGTA-204ENST00000558376 BTG4Q9NY30 223 aa16.37■□□□□ 0.21
RABGGTA-204ENST00000558376 TRAK1Q9UPV9 953 aa16.37■□□□□ 0.21
RABGGTA-204ENST00000558376 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
RABGGTA-204ENST00000558376 ADGRB1O14514 1584 aa16.37■□□□□ 0.21
RABGGTA-204ENST00000558376 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
RABGGTA-204ENST00000558376 MINK1Q8N4C8 1332 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-204ENST00000558376 A0A0G2JS52 829 aa16.35■□□□□ 0.21
RABGGTA-204ENST00000558376 MYT1Q01538 1121 aa16.35■□□□□ 0.21
RABGGTA-204ENST00000558376 HRCP23327 699 aa16.35■□□□□ 0.21
RABGGTA-204ENST00000558376 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-204ENST00000558376 PSDA5PKW4 1024 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-204ENST00000558376 COL14A1Q05707 1796 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-204ENST00000558376 FAM182BQ5T319 152 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms