RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 NUP160Q12769 1436 aa10.18□□□□□ -0.78
MARK3-212ENST00000558223 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
MARK3-212ENST00000558223 ITGAEP38570 1179 aa10.18□□□□□ -0.78
MARK3-212ENST00000558223 USP35Q9P2H5 1018 aa10.18□□□□□ -0.78
MARK3-212ENST00000558223 NUTM2FA1L443 756 aa10.17□□□□□ -0.78
MARK3-212ENST00000558223 EIF5BO60841 1220 aaKnown RBP10.17□□□□□ -0.78
MARK3-212ENST00000558223 SH3D19Q5HYK7 790 aa10.17□□□□□ -0.78
MARK3-212ENST00000558223 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
MARK3-212ENST00000558223 KIAA0556O60303 1618 aa10.16□□□□□ -0.78
MARK3-212ENST00000558223 SLC34A2O95436 690 aa10.16□□□□□ -0.78
MARK3-212ENST00000558223 ZNF330Q9Y3S2 320 aaPredicted RBP10.16□□□□□ -0.78
MARK3-212ENST00000558223 DPYSL4O14531 572 aa10.15□□□□□ -0.78
MARK3-212ENST00000558223 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
MARK3-212ENST00000558223 MYT1LQ9UL68 1186 aa10.15□□□□□ -0.78
MARK3-212ENST00000558223 PCDHGA4Q9Y5G9 962 aa10.15□□□□□ -0.78
MARK3-212ENST00000558223 DISP1Q96F81 1524 aa10.15□□□□□ -0.78
MARK3-212ENST00000558223 GNPATO15228 680 aa10.14□□□□□ -0.79
MARK3-212ENST00000558223 NUDT7P0C024 238 aa10.14□□□□□ -0.79
MARK3-212ENST00000558223 PDIA6Q15084 440 aa10.14□□□□□ -0.79
MARK3-212ENST00000558223 GIGYF2Q6Y7W6 1299 aaKnown RBP10.14□□□□□ -0.79
MARK3-212ENST00000558223 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
MARK3-212ENST00000558223 UACAQ9BZF9 1416 aa10.14□□□□□ -0.79
MARK3-212ENST00000558223 FOXK1P85037 733 aa10.13□□□□□ -0.79
MARK3-212ENST00000558223 ROCK1Q13464 1354 aa10.13□□□□□ -0.79
MARK3-212ENST00000558223 MS4A1P11836 297 aa10.12□□□□□ -0.79
MARK3-212ENST00000558223 KCNA1Q09470 495 aa10.12□□□□□ -0.79
MARK3-212ENST00000558223 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
MARK3-212ENST00000558223 AMOTL2Q9Y2J4 779 aa10.12□□□□□ -0.79
MARK3-212ENST00000558223 PTPN23Q9H3S7 1636 aa10.11□□□□□ -0.79
MARK3-212ENST00000558223 DSG2Q14126 1118 aa10.11□□□□□ -0.79
MARK3-212ENST00000558223 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
MARK3-212ENST00000558223 COG6Q9Y2V7 657 aa10.11□□□□□ -0.79
MARK3-212ENST00000558223 RAPGEF6Q8TEU7 1601 aa10.11□□□□□ -0.79
MARK3-212ENST00000558223 TROQ12816 1431 aaPredicted RBP10.1□□□□□ -0.79
MARK3-212ENST00000558223 NAIPQ13075 1403 aa10.09□□□□□ -0.79
MARK3-212ENST00000558223 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
MARK3-212ENST00000558223 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
MARK3-212ENST00000558223 SKIV2LQ15477 1246 aaKnown RBP10.09□□□□□ -0.79
MARK3-212ENST00000558223 LHX6Q9UPM6 363 aa10.09□□□□□ -0.79
MARK3-212ENST00000558223 NUP153P49790 1475 aaKnown RBP10.09□□□□□ -0.79
MARK3-212ENST00000558223 MAPKBP1O60336 1514 aa10.08□□□□□ -0.8
MARK3-212ENST00000558223 HIC1Q14526 733 aa10.08□□□□□ -0.8
MARK3-212ENST00000558223 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
MARK3-212ENST00000558223 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
MARK3-212ENST00000558223 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
MARK3-212ENST00000558223 GRXCR2A6NFK2 248 aa10.07□□□□□ -0.8
MARK3-212ENST00000558223 BRD1O95696 1058 aa10.07□□□□□ -0.8
MARK3-212ENST00000558223 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
MARK3-212ENST00000558223 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
MARK3-212ENST00000558223 PTCD2Q8WV60 388 aaKnown RBP10.07□□□□□ -0.8
MARK3-212ENST00000558223 FCHSD2O94868 740 aa10.06□□□□□ -0.8
MARK3-212ENST00000558223 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
MARK3-212ENST00000558223 MAGI3Q5TCQ9 1506 aa10.06□□□□□ -0.8
MARK3-212ENST00000558223 LRRIQ1Q96JM4 1722 aa10.05□□□□□ -0.8
MARK3-212ENST00000558223 TONSLQ96HA7 1378 aa10.05□□□□□ -0.8
MARK3-212ENST00000558223 CALR3Q96L12 384 aaKnown RBP10.05□□□□□ -0.8
MARK3-212ENST00000558223 CDK13Q14004 1512 aaKnown RBP10.04□□□□□ -0.8
MARK3-212ENST00000558223 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
MARK3-212ENST00000558223 PTPRKQ15262 1439 aa10.04□□□□□ -0.8
MARK3-212ENST00000558223 FECHP22830 423 aa10.03□□□□□ -0.8
MARK3-212ENST00000558223 PTPRGP23470 1445 aa10.03□□□□□ -0.8
MARK3-212ENST00000558223 PTGER2P43116 358 aa10.03□□□□□ -0.8
MARK3-212ENST00000558223 POTEEQ6S8J3 1075 aa10.03□□□□□ -0.8
MARK3-212ENST00000558223 OXER1Q8TDS5 423 aa10.03□□□□□ -0.8
MARK3-212ENST00000558223 CFDP1Q9UEE9 299 aaPredicted RBP10.03□□□□□ -0.8
MARK3-212ENST00000558223 DAPK1P53355 1430 aa10.02□□□□□ -0.81
MARK3-212ENST00000558223 LSM11P83369 360 aaKnown RBP eCLIP10.02□□□□□ -0.815e-18■■■■■ 28.9
MARK3-212ENST00000558223 ABCA8O94911 1581 aa10.01□□□□□ -0.81
MARK3-212ENST00000558223 ADCY10Q96PN6 1610 aa10.01□□□□□ -0.81
MARK3-212ENST00000558223 PROCA1Q8NCQ7 364 aaPredicted RBP10.01□□□□□ -0.81
MARK3-212ENST00000558223 ITSN2Q9NZM3 1697 aa10.01□□□□□ -0.81
MARK3-212ENST00000558223 PRG4Q92954 1404 aaPredicted RBP10□□□□□ -0.81
MARK3-212ENST00000558223 GCC2Q8IWJ2 1684 aa10□□□□□ -0.81
MARK3-212ENST00000558223 NEUROD1Q13562 356 aa10□□□□□ -0.81
MARK3-212ENST00000558223 BANK1Q8NDB2 785 aa10□□□□□ -0.81
MARK3-212ENST00000558223 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
MARK3-212ENST00000558223 USTQ9Y2C2 406 aa10□□□□□ -0.81
MARK3-212ENST00000558223 ANKRD30AQ9BXX3 1397 aa10□□□□□ -0.81
MARK3-212ENST00000558223 ABCC5O15440 1437 aa9.99□□□□□ -0.81
MARK3-212ENST00000558223 PLB1Q6P1J6 1458 aa9.99□□□□□ -0.81
MARK3-212ENST00000558223 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
MARK3-212ENST00000558223 CSB-PGBD3P0DP91 1061 aa9.99□□□□□ -0.81
MARK3-212ENST00000558223 AXIN2Q9Y2T1 843 aa9.99□□□□□ -0.81
MARK3-212ENST00000558223 DNMT1P26358 1616 aaKnown RBP9.99□□□□□ -0.81
MARK3-212ENST00000558223 ADGRL2O95490 1459 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 TSPY4P0CV99 314 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 TSPY10P0CW01 314 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 CLCN1P35523 988 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 TRIM52Q96A61 297 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 SIN3AQ96ST3 1273 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 MPHOSPH9Q99550 1183 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 RRP7BPQ9NSQ0 103 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 POLR3EQ9NVU0 708 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 ATP10BO94823 1461 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 SHANK2Q9UPX8 1470 aa9.98□□□□□ -0.81
MARK3-212ENST00000558223 TBC1D12O60347 775 aa9.97□□□□□ -0.81
MARK3-212ENST00000558223 PBXIP1Q96AQ6 731 aa9.97□□□□□ -0.81
MARK3-212ENST00000558223 SNRKQ9NRH2 765 aa9.97□□□□□ -0.81
MARK3-212ENST00000558223 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
MARK3-212ENST00000558223 KIF14Q15058 1648 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms