RNA–Protein interactions for RNA: ENST00000557947.5

TCF12-208, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-208	ENST00000557947	LRRC59	Q96AG4	307 aa	Known RBP	32.22	■■■□□ 2.75
TCF12-208	ENST00000557947	C14orf93	Q9H972	538 aa	Known RBP	32.22	■■■□□ 2.75
TCF12-208	ENST00000557947	KNDC1	Q76NI1	1749 aa		32.21	■■■□□ 2.75
TCF12-208	ENST00000557947	CDC42BPG	Q6DT37	1551 aa		32.21	■■■□□ 2.75
TCF12-208	ENST00000557947	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.2	■■■□□ 2.75
TCF12-208	ENST00000557947	CFAP70	Q5T0N1	1121 aa		32.19	■■■□□ 2.74
TCF12-208	ENST00000557947	PNPLA6	Q8IY17	1366 aa		32.19	■■■□□ 2.74
TCF12-208	ENST00000557947	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.18	■■■□□ 2.74
TCF12-208	ENST00000557947	NUTM2E	B1AL46	878 aa	Predicted RBP	32.18	■■■□□ 2.74
TCF12-208	ENST00000557947	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.18	■■■□□ 2.74
TCF12-208	ENST00000557947	MEX3C	Q5U5Q3	659 aa	Known RBP	32.17	■■■□□ 2.74
TCF12-208	ENST00000557947	SOS2	Q07890	1332 aa	Predicted RBP	32.16	■■■□□ 2.74
TCF12-208	ENST00000557947	SIRT1	Q96EB6	747 aa		32.11	■■■□□ 2.73
TCF12-208	ENST00000557947	ESCO1	Q5FWF5	840 aa		32.09	■■■□□ 2.73
TCF12-208	ENST00000557947	DHX57	Q6P158	1386 aa	Known RBP	32.08	■■■□□ 2.73
TCF12-208	ENST00000557947	NUTM2F	A1L443	756 aa		32.08	■■■□□ 2.73
TCF12-208	ENST00000557947	ZNF772	Q68DY9	489 aa	Predicted RBP	32.08	■■■□□ 2.73
TCF12-208	ENST00000557947	FMN2	Q9NZ56	1722 aa		32.04	■■■□□ 2.72
TCF12-208	ENST00000557947	ADGRB1	O14514	1584 aa		32.04	■■■□□ 2.72
TCF12-208	ENST00000557947	AFF2	P51816	1311 aa		32.03	■■■□□ 2.72
TCF12-208	ENST00000557947	PXDN	Q92626	1479 aa		32.03	■■■□□ 2.72
TCF12-208	ENST00000557947	DCAF11	Q8TEB1	546 aa		32.02	■■■□□ 2.72
TCF12-208	ENST00000557947	KDM2A	Q9Y2K7	1162 aa		32.02	■■■□□ 2.72
TCF12-208	ENST00000557947	NPHP3	Q7Z494	1330 aa		32.01	■■■□□ 2.72
TCF12-208	ENST00000557947	FOXO3	O43524	673 aa		32.01	■■■□□ 2.71
TCF12-208	ENST00000557947	PRAM1	Q96QH2	718 aa		32	■■■□□ 2.71
TCF12-208	ENST00000557947	XPC	Q01831	940 aa	Predicted RBP	31.99	■■■□□ 2.71
TCF12-208	ENST00000557947	DLC1	Q96QB1	1528 aa		31.99	■■■□□ 2.71
TCF12-208	ENST00000557947	C8orf37	Q96NL8	207 aa		31.98	■■■□□ 2.71
TCF12-208	ENST00000557947	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.97	■■■□□ 2.71
TCF12-208	ENST00000557947	ADAMTS2	O95450	1211 aa		31.96	■■■□□ 2.71
TCF12-208	ENST00000557947	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.96	■■■□□ 2.71	7e-7	■■■□□ 15.9
TCF12-208	ENST00000557947	STAC3	Q96MF2	364 aa		31.93	■■■□□ 2.7
TCF12-208	ENST00000557947	RXRB	P28702	533 aa		31.92	■■■□□ 2.7
TCF12-208	ENST00000557947	TRAK1	Q9UPV9	953 aa		31.92	■■■□□ 2.7
TCF12-208	ENST00000557947	RGPD8	O14715	1765 aa	Predicted RBP	31.91	■■■□□ 2.7
TCF12-208	ENST00000557947	POGK	Q9P215	609 aa		31.9	■■■□□ 2.7
TCF12-208	ENST00000557947	KIF1A	Q12756	1690 aa		31.89	■■■□□ 2.7
TCF12-208	ENST00000557947	NGLY1	Q96IV0	654 aa		31.88	■■■□□ 2.69
TCF12-208	ENST00000557947	QTRT2	Q9H974	415 aa	Known RBP	31.87	■■■□□ 2.69
TCF12-208	ENST00000557947	ADGRB2	O60241	1585 aa		31.86	■■■□□ 2.69
TCF12-208	ENST00000557947	PHF8	Q9UPP1	1060 aa		31.86	■■■□□ 2.69
TCF12-208	ENST00000557947	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.85	■■■□□ 2.69
TCF12-208	ENST00000557947	SPATA31A3	Q5VYP0	1347 aa		31.85	■■■□□ 2.69
TCF12-208	ENST00000557947	USP32	Q8NFA0	1604 aa		31.85	■■■□□ 2.69
TCF12-208	ENST00000557947	KRT28	Q7Z3Y7	464 aa		31.84	■■■□□ 2.69
TCF12-208	ENST00000557947	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.82	■■■□□ 2.68
TCF12-208	ENST00000557947	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.82	■■■□□ 2.68
TCF12-208	ENST00000557947	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.8	■■■□□ 2.68
TCF12-208	ENST00000557947	ANKAR	Q7Z5J8	1434 aa		31.8	■■■□□ 2.68
TCF12-208	ENST00000557947	RBM6	P78332	1123 aa	Known RBP	31.79	■■■□□ 2.68
TCF12-208	ENST00000557947	USP21	Q9UK80	565 aa		31.78	■■■□□ 2.68
TCF12-208	ENST00000557947	PRR36	Q9H6K5	1346 aa		31.77	■■■□□ 2.68
TCF12-208	ENST00000557947	RGS12	O14924	1447 aa		31.76	■■■□□ 2.68
TCF12-208	ENST00000557947	PMFBP1	Q8TBY8	1022 aa		31.76	■■■□□ 2.67
TCF12-208	ENST00000557947	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.75	■■■□□ 2.67
TCF12-208	ENST00000557947	MARF1	Q9Y4F3	1742 aa	Known RBP	31.75	■■■□□ 2.67
TCF12-208	ENST00000557947	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.74	■■■□□ 2.67
TCF12-208	ENST00000557947	TNS3	Q68CZ2	1445 aa		31.74	■■■□□ 2.67
TCF12-208	ENST00000557947	WASL	O00401	505 aa	Predicted RBP	31.73	■■■□□ 2.67
TCF12-208	ENST00000557947	BCL9L	Q86UU0	1499 aa		31.72	■■■□□ 2.67
TCF12-208	ENST00000557947	ATRN	O75882	1429 aa		31.72	■■■□□ 2.67
TCF12-208	ENST00000557947	SBNO1	A3KN83	1393 aa		31.71	■■■□□ 2.67
TCF12-208	ENST00000557947	TULP4	Q9NRJ4	1543 aa		31.71	■■■□□ 2.67
TCF12-208	ENST00000557947	PSME1	Q06323	249 aa		31.71	■■■□□ 2.67
TCF12-208	ENST00000557947	TRPC5	Q9UL62	973 aa	Predicted RBP	31.71	■■■□□ 2.67
TCF12-208	ENST00000557947	KIAA1210	Q9ULL0	1709 aa		31.69	■■■□□ 2.66
TCF12-208	ENST00000557947	NBPF1	Q3BBV0	1214 aa		31.69	■■■□□ 2.66
TCF12-208	ENST00000557947	CABLES1	Q8TDN4	633 aa		31.67	■■■□□ 2.66
TCF12-208	ENST00000557947	EIF3A	Q14152	1382 aa	Known RBP	31.67	■■■□□ 2.66
TCF12-208	ENST00000557947	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.64	■■■□□ 2.66
TCF12-208	ENST00000557947	SLIT2	O94813	1529 aa		31.64	■■■□□ 2.66
TCF12-208	ENST00000557947	SIN3A	Q96ST3	1273 aa		31.62	■■■□□ 2.65
TCF12-208	ENST00000557947	ATP7B	P35670	1465 aa		31.61	■■■□□ 2.65
TCF12-208	ENST00000557947	ARHGEF10	O15013	1369 aa		31.61	■■■□□ 2.65
TCF12-208	ENST00000557947	LMOD2	Q6P5Q4	547 aa		31.61	■■■□□ 2.65
TCF12-208	ENST00000557947	L3MBTL2	Q969R5	705 aa		31.61	■■■□□ 2.65
TCF12-208	ENST00000557947	ABCA3	Q99758	1704 aa		31.61	■■■□□ 2.65
TCF12-208	ENST00000557947	PLEKHG5	O94827	1062 aa		31.6	■■■□□ 2.65
TCF12-208	ENST00000557947	NUDT16	Q96DE0	195 aa	Known RBP	31.59	■■■□□ 2.65
TCF12-208	ENST00000557947	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.58	■■■□□ 2.65
TCF12-208	ENST00000557947	ALS2	Q96Q42	1657 aa		31.57	■■■□□ 2.65
TCF12-208	ENST00000557947	UNC5CL	Q8IV45	518 aa		31.57	■■■□□ 2.64
TCF12-208	ENST00000557947	CDK19	Q9BWU1	502 aa		31.57	■■■□□ 2.64
TCF12-208	ENST00000557947	GPRASP1	Q5JY77	1395 aa		31.56	■■■□□ 2.64
TCF12-208	ENST00000557947	GJD4	Q96KN9	370 aa	Predicted RBP	31.56	■■■□□ 2.64
TCF12-208	ENST00000557947	HAP1	P54257	671 aa	Predicted RBP	31.54	■■■□□ 2.64
TCF12-208	ENST00000557947	NGDN	Q8NEJ9	315 aa	Known RBP	31.54	■■■□□ 2.64
TCF12-208	ENST00000557947	ITSN1	Q15811	1721 aa		31.52	■■■□□ 2.64
TCF12-208	ENST00000557947	GLI3	P10071	1580 aa		31.51	■■■□□ 2.64
TCF12-208	ENST00000557947	RALGAPB	Q86X10	1494 aa		31.5	■■■□□ 2.63
TCF12-208	ENST00000557947	PLCH1	Q4KWH8	1693 aa		31.49	■■■□□ 2.63
TCF12-208	ENST00000557947	TOPAZ1	Q8N9V7	1692 aa		31.49	■■■□□ 2.63
TCF12-208	ENST00000557947	FAM83G	A6ND36	823 aa		31.49	■■■□□ 2.63
TCF12-208	ENST00000557947	NEUROD1	Q13562	356 aa		31.49	■■■□□ 2.63
TCF12-208	ENST00000557947	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.47	■■■□□ 2.63
TCF12-208	ENST00000557947	CCDC61	Q9Y6R9	512 aa		31.46	■■■□□ 2.63
TCF12-208	ENST00000557947	NWD2	Q9ULI1	1742 aa		31.46	■■■□□ 2.63
TCF12-208	ENST00000557947	CRYBG1	Q9Y4K1	1723 aa		31.46	■■■□□ 2.63
TCF12-208	ENST00000557947	POLR3A	O14802	1390 aa	Predicted RBP	31.45	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms