RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 TRAK1Q9UPV9 953 aa35.28■■■■□ 3.24
SDR39U1-221ENST00000556707 ARHGEF28Q8N1W1 1705 aaKnown RBP35.26■■■■□ 3.23
SDR39U1-221ENST00000556707 PRAM1Q96QH2 718 aa35.25■■■■□ 3.23
SDR39U1-221ENST00000556707 MST1RQ04912 1400 aa35.24■■■■□ 3.23
SDR39U1-221ENST00000556707 CCER1Q8TC90 406 aaPredicted RBP35.24■■■■□ 3.23
SDR39U1-221ENST00000556707 CDC42BPGQ6DT37 1551 aa35.24■■■■□ 3.23
SDR39U1-221ENST00000556707 POGKQ9P215 609 aa35.22■■■■□ 3.23
SDR39U1-221ENST00000556707 HSPA1LP34931 641 aa35.21■■■■□ 3.23
SDR39U1-221ENST00000556707 NBPF8Q3BBV2 869 aa35.21■■■■□ 3.23
SDR39U1-221ENST00000556707 SAFB2Q14151 953 aaKnown RBP eCLIP35.18■■■■□ 3.22
SDR39U1-221ENST00000556707 C1orf167Q5SNV9 1468 aa35.15■■■■□ 3.22
SDR39U1-221ENST00000556707 ROCK2O75116 1388 aaKnown RBP35.13■■■■□ 3.21
SDR39U1-221ENST00000556707 FMN2Q9NZ56 1722 aa35.13■■■■□ 3.21
SDR39U1-221ENST00000556707 BRINP3Q76B58 766 aa35.12■■■■□ 3.21
SDR39U1-221ENST00000556707 TIMELESSQ9UNS1 1208 aa35.12■■■■□ 3.21
SDR39U1-221ENST00000556707 ADGRB2O60241 1585 aa35.12■■■■□ 3.21
SDR39U1-221ENST00000556707 PHLPP1O60346 1717 aa35.09■■■■□ 3.21
SDR39U1-221ENST00000556707 RALGAPBQ86X10 1494 aa35.09■■■■□ 3.21
SDR39U1-221ENST00000556707 GPRASP1Q5JY77 1395 aa35.08■■■■□ 3.21
SDR39U1-221ENST00000556707 MINK1Q8N4C8 1332 aaPredicted RBP35.06■■■■□ 3.2
SDR39U1-221ENST00000556707 AHDC1Q5TGY3 1603 aaPredicted RBP35.06■■■■□ 3.2
SDR39U1-221ENST00000556707 HIRIP3Q9BW71 556 aaPredicted RBP35.04■■■■□ 3.2
SDR39U1-221ENST00000556707 RGPD8O14715 1765 aaPredicted RBP35.04■■■■□ 3.2
SDR39U1-221ENST00000556707 NHSL1Q5SYE7 1610 aa35.03■■■■□ 3.2
SDR39U1-221ENST00000556707 NUTM2FA1L443 756 aa35.01■■■■□ 3.2
SDR39U1-221ENST00000556707 ORAI2Q96SN7 254 aa35.01■■■■□ 3.2
SDR39U1-221ENST00000556707 CENPJQ9HC77 1338 aaPredicted RBP35■■■■□ 3.19
SDR39U1-221ENST00000556707 QRICH2Q9H0J4 1663 aa34.99■■■■□ 3.19
SDR39U1-221ENST00000556707 COL16A1Q07092 1604 aaPredicted RBP34.99■■■■□ 3.19
SDR39U1-221ENST00000556707 CARD11Q9BXL7 1154 aa34.98■■■■□ 3.19
SDR39U1-221ENST00000556707 WASLO00401 505 aaPredicted RBP34.97■■■■□ 3.19
SDR39U1-221ENST00000556707 ESCO1Q5FWF5 840 aa34.97■■■■□ 3.19
SDR39U1-221ENST00000556707 EIF3AQ14152 1382 aaKnown RBP34.95■■■■□ 3.19
SDR39U1-221ENST00000556707 USP32Q8NFA0 1604 aa34.95■■■■□ 3.18
SDR39U1-221ENST00000556707 ANKARQ7Z5J8 1434 aa34.94■■■■□ 3.18
SDR39U1-221ENST00000556707 TULP4Q9NRJ4 1543 aa34.92■■■■□ 3.18
SDR39U1-221ENST00000556707 KIF1AQ12756 1690 aa34.92■■■■□ 3.18
SDR39U1-221ENST00000556707 DDX17Q92841 729 aaKnown RBP34.9■■■■□ 3.18
SDR39U1-221ENST00000556707 CDK19Q9BWU1 502 aa34.86■■■■□ 3.17
SDR39U1-221ENST00000556707 PRR36Q9H6K5 1346 aa34.85■■■■□ 3.17
SDR39U1-221ENST00000556707 NPHP3Q7Z494 1330 aa34.84■■■■□ 3.17
SDR39U1-221ENST00000556707 ITSN1Q15811 1721 aa34.84■■■■□ 3.17
SDR39U1-221ENST00000556707 PHF8Q9UPP1 1060 aa34.84■■■■□ 3.17
SDR39U1-221ENST00000556707 JCADQ9P266 1359 aa34.84■■■■□ 3.17
SDR39U1-221ENST00000556707 FOXO3O43524 673 aa34.83■■■■□ 3.17
SDR39U1-221ENST00000556707 SOS2Q07890 1332 aaPredicted RBP34.82■■■■□ 3.17
SDR39U1-221ENST00000556707 ATP7BP35670 1465 aa34.82■■■■□ 3.16
SDR39U1-221ENST00000556707 SHPRHQ149N8 1683 aa34.81■■■■□ 3.16
SDR39U1-221ENST00000556707 LRRC59Q96AG4 307 aaKnown RBP34.79■■■■□ 3.16
SDR39U1-221ENST00000556707 NUDT16Q96DE0 195 aaKnown RBP34.79■■■■□ 3.16
SDR39U1-221ENST00000556707 PXDNQ92626 1479 aa34.78■■■■□ 3.16
SDR39U1-221ENST00000556707 SBNO2Q9Y2G9 1366 aa34.78■■■■□ 3.16
SDR39U1-221ENST00000556707 TOPAZ1Q8N9V7 1692 aa34.76■■■■□ 3.16
SDR39U1-221ENST00000556707 EVC2Q86UK5 1308 aa34.76■■■■□ 3.15
SDR39U1-221ENST00000556707 SRPK2P78362 688 aaKnown RBP34.74■■■■□ 3.15
SDR39U1-221ENST00000556707 PMFBP1Q8TBY8 1022 aa34.74■■■■□ 3.15
SDR39U1-221ENST00000556707 MED1Q15648 1581 aaPredicted RBP34.74■■■■□ 3.15
SDR39U1-221ENST00000556707 XPCQ01831 940 aaPredicted RBP34.73■■■■□ 3.15
SDR39U1-221ENST00000556707 CABP2Q9NPB3 220 aa34.72■■■■□ 3.15
SDR39U1-221ENST00000556707 CCDC61Q9Y6R9 512 aa34.72■■■■□ 3.15
SDR39U1-221ENST00000556707 USP47Q96K76 1375 aa34.7■■■■□ 3.15
SDR39U1-221ENST00000556707 KRT28Q7Z3Y7 464 aa34.69■■■■□ 3.14
SDR39U1-221ENST00000556707 PNPLA6Q8IY17 1366 aa34.69■■■■□ 3.14
SDR39U1-221ENST00000556707 ST20-MTHFSA0A0A6YYL1 179 aa34.68■■■■□ 3.14
SDR39U1-221ENST00000556707 SPATA31A6Q5VVP1 1343 aa34.68■■■■□ 3.14
SDR39U1-221ENST00000556707 PSME1Q06323 249 aa34.67■■■■□ 3.14
SDR39U1-221ENST00000556707 NGDNQ8NEJ9 315 aaKnown RBP34.65■■■■□ 3.14
SDR39U1-221ENST00000556707 PLEKHG3A1L390 1219 aa34.64■■■■□ 3.14
SDR39U1-221ENST00000556707 TESK2Q96S53 571 aa34.63■■■■□ 3.13
SDR39U1-221ENST00000556707 PPIP5K1Q6PFW1 1433 aa34.63■■■■□ 3.13
SDR39U1-221ENST00000556707 TRPM3Q9HCF6 1732 aaPredicted RBP34.62■■■■□ 3.13
SDR39U1-221ENST00000556707 SPATA31A3Q5VYP0 1347 aa34.61■■■■□ 3.13
SDR39U1-221ENST00000556707 COL22A1Q8NFW1 1626 aaPredicted RBP34.61■■■■□ 3.13
SDR39U1-221ENST00000556707 SBNO1A3KN83 1393 aa34.61■■■■□ 3.13
SDR39U1-221ENST00000556707 POLR3AO14802 1390 aaPredicted RBP34.61■■■■□ 3.13
SDR39U1-221ENST00000556707 SLC24A1O60721 1099 aa34.59■■■■□ 3.13
SDR39U1-221ENST00000556707 ACEP12821 1306 aa34.58■■■■□ 3.13
SDR39U1-221ENST00000556707 TNS3Q68CZ2 1445 aa34.58■■■■□ 3.13
SDR39U1-221ENST00000556707 LRP6O75581 1613 aa34.58■■■■□ 3.13
SDR39U1-221ENST00000556707 ATAD2Q6PL18 1390 aa34.58■■■■□ 3.13
SDR39U1-221ENST00000556707 DISP3Q9P2K9 1392 aa34.57■■■■□ 3.12
SDR39U1-221ENST00000556707 CABP1Q9NZU7 370 aa34.55■■■■□ 3.12
SDR39U1-221ENST00000556707 NUTM2BA6NNL0 878 aaPredicted RBP34.54■■■■□ 3.12
SDR39U1-221ENST00000556707 NUTM2EB1AL46 878 aaPredicted RBP34.54■■■■□ 3.12
SDR39U1-221ENST00000556707 NUTM2AQ8IVF1 878 aaPredicted RBP34.54■■■■□ 3.12
SDR39U1-221ENST00000556707 ALS2Q96Q42 1657 aa34.54■■■■□ 3.12
SDR39U1-221ENST00000556707 PUS7Q96PZ0 661 aaKnown RBP34.52■■■■□ 3.12
SDR39U1-221ENST00000556707 ARHGEF10O15013 1369 aa34.5■■■■□ 3.11
SDR39U1-221ENST00000556707 LMOD2Q6P5Q4 547 aa34.48■■■■□ 3.11
SDR39U1-221ENST00000556707 PHF23Q9BUL5 403 aaPredicted RBP34.48■■■■□ 3.11
SDR39U1-221ENST00000556707 AKAP12Q02952 1782 aa34.48■■■■□ 3.11
SDR39U1-221ENST00000556707 TMF1P82094 1093 aa34.47■■■■□ 3.11
SDR39U1-221ENST00000556707 PAK3O75914 559 aaPredicted RBP34.46■■■■□ 3.11
SDR39U1-221ENST00000556707 EIF4G2P78344 907 aaKnown RBP eCLIP34.46■■■■□ 3.11
SDR39U1-221ENST00000556707 MEX3CQ5U5Q3 659 aaKnown RBP34.46■■■■□ 3.11
SDR39U1-221ENST00000556707 MARF1Q9Y4F3 1742 aaKnown RBP34.42■■■■□ 3.1
SDR39U1-221ENST00000556707 USP6P35125 1406 aa34.42■■■■□ 3.1
SDR39U1-221ENST00000556707 BRD4O60885 1362 aaPredicted RBP34.42■■■■□ 3.1
SDR39U1-221ENST00000556707 ABCA3Q99758 1704 aa34.41■■■■□ 3.1
SDR39U1-221ENST00000556707 HSPA5P11021 654 aaKnown RBP34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms