RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 DNAJA1P31689 397 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 ATP6V1E1P36543 226 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 TRIM11Q96F44 468 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 SEPT11Q9NVA2 429 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 CCND1P24385 295 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 RDXP35241 583 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 MAP3K9P80192 1104 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 POLA2Q14181 598 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 TEX2Q8IWB9 1127 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 ZNF622Q969S3 477 aaKnown RBP eCLIP2.27□□□□□ -2.052e-8■□□□□ 9.6
KTN1-224ENST00000556631 ZSWIM4Q9H7M6 989 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 NISCHQ9Y2I1 1504 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 MARSP56192 900 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 ZC3H6P61129 1189 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 MKRN3Q13064 507 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 GLYCTKQ8IVS8 523 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 SPATA17Q96L03 361 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 RBM28Q9NW13 759 aaKnown RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 VTI1BQ9UEU0 232 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.27□□□□□ -2.05
KTN1-224ENST00000556631 AP1G2O75843 785 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 SSBP05455 408 aaKnown RBP eCLIP2.27□□□□□ -2.05
KTN1-224ENST00000556631 TSPY4P0CV99 314 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 TSPY10P0CW01 314 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 IFRD2Q12894 506 aaPredicted RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 SLC4A10Q6U841 1118 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 ZNF467Q7Z7K2 595 aaPredicted RBP2.27□□□□□ -2.05
KTN1-224ENST00000556631 RB1CC1Q8TDY2 1594 aa2.27□□□□□ -2.05
KTN1-224ENST00000556631 CCDC85CA6NKD9 419 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 SEMA3EO15041 775 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 TCF3P15923 654 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 PCSK2P16519 638 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 NLRP6P59044 892 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 IRX6P78412 446 aaPredicted RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 SPTY2D1Q68D10 685 aaPredicted RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 RPGRQ92834 1020 aaKnown RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 DNAI2Q9GZS0 605 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 SUDS3Q9H7L9 328 aaPredicted RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 NAP1L2Q9ULW6 460 aaPredicted RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 CHGBP05060 677 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 TNNT3P45378 269 aaPredicted RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 ZFYVE27Q5T4F4 411 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 CKAP2LQ8IYA6 745 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 ZNF513Q8N8E2 541 aaPredicted RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 KCNV2Q8TDN2 545 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 A6NJR5 290 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 SETSIPP0DME0 302 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 STK3Q13188 491 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 PLS1Q14651 629 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 SLMAPQ14BN4 828 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 ZRSR1Q15695 479 aaKnown RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 CCDC146Q8IYE0 955 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 MICAL1Q8TDZ2 1067 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 MRRFQ96E11 262 aaKnown RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 USTQ9Y2C2 406 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 AMOTL2Q9Y2J4 779 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 LRCH2Q5VUJ6 765 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 ISM2Q6H9L7 571 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 PBXIP1Q96AQ6 731 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 MPHOSPH6Q99547 160 aaKnown RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 SPOCK3Q9BQ16 436 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 PRDM10Q9NQV6 1147 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 G3BP2Q9UN86 482 aaKnown RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.26□□□□□ -2.05
KTN1-224ENST00000556631 GTPBP6O43824 516 aaPredicted RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 IFIT2P09913 472 aaKnown RBP2.26□□□□□ -2.05
KTN1-224ENST00000556631 TDO2P48775 406 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 SLC9A5Q14940 896 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 SLC4A8Q2Y0W8 1093 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 MFSD4BQ5TF39 518 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 IRAK4Q9NWZ3 460 aa2.26□□□□□ -2.05
KTN1-224ENST00000556631 TPM2P07951 284 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 MATR3P43243 847 aaKnown RBP eCLIP2.25□□□□□ -2.05
KTN1-224ENST00000556631 DNTTIP2Q5QJE6 756 aaKnown RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 BARGINQ6ZT62 677 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 CCDC91Q7Z6B0 441 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 TMC2Q8TDI7 906 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 KCNH8Q96L42 1107 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 CCDC85AQ96PX6 553 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 IQSEC3Q9UPP2 1182 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 RABGAP1Q9Y3P9 1069 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 CTDP1Q9Y5B0 961 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 TMCO5BA8MYB1 307 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 MAPK1P28482 360 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 CLCN1P35523 988 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 USP5P45974 858 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 BECN1Q14457 450 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 LONRF3Q496Y0 759 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 TMEM259Q4ZIN3 620 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 PROCA1Q8NCQ7 364 aaPredicted RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 CXorf38Q8TB03 319 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 TIGD1Q96MW7 591 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 UIMC1Q96RL1 719 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 PPP4R2Q9NY27 417 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 PES1O00541 588 aaKnown RBP2.25□□□□□ -2.05
KTN1-224ENST00000556631 KIF4AO95239 1232 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 ATICP31939 592 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 WASHC4Q2M389 1173 aa2.25□□□□□ -2.05
KTN1-224ENST00000556631 TMEM87AQ8NBN3 555 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms