RNA–Protein interactions for RNA: ENST00000556428.5

SNW1-206, Transcript of SNW domain containing 1, humanhuman

TSL 2

Gene SNW1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-206ENST00000556428 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
SNW1-206ENST00000556428 SLC26A8Q96RN1 970 aa9.74□□□□□ -0.85
SNW1-206ENST00000556428 LRRC7Q96NW7 1537 aa9.73□□□□□ -0.85
SNW1-206ENST00000556428 UBAP1LF5GYI3 381 aa9.72□□□□□ -0.85
SNW1-206ENST00000556428 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
SNW1-206ENST00000556428 PLEKHG1Q9ULL1 1385 aa9.72□□□□□ -0.85
SNW1-206ENST00000556428 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
SNW1-206ENST00000556428 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
SNW1-206ENST00000556428 XIRP1Q702N8 1843 aaKnown RBP9.7□□□□□ -0.86
SNW1-206ENST00000556428 ALKQ9UM73 1620 aa9.7□□□□□ -0.86
SNW1-206ENST00000556428 IGSF3O75054 1194 aa9.7□□□□□ -0.86
SNW1-206ENST00000556428 NWD1Q149M9 1564 aa9.69□□□□□ -0.86
SNW1-206ENST00000556428 KIF1BO60333 1816 aa9.69□□□□□ -0.86
SNW1-206ENST00000556428 ADAMTS13Q76LX8 1427 aa9.69□□□□□ -0.86
SNW1-206ENST00000556428 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
SNW1-206ENST00000556428 ZNF326Q5BKZ1 582 aaKnown RBP9.68□□□□□ -0.86
SNW1-206ENST00000556428 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.68□□□□□ -0.86
SNW1-206ENST00000556428 NEXMIFQ5QGS0 1516 aa9.68□□□□□ -0.86
SNW1-206ENST00000556428 SETD5Q9C0A6 1442 aa9.68□□□□□ -0.86
SNW1-206ENST00000556428 NRXN3Q9Y4C0 1643 aa9.68□□□□□ -0.86
SNW1-206ENST00000556428 PIP4K2BP78356 416 aa9.68□□□□□ -0.86
SNW1-206ENST00000556428 NKTRP30414 1462 aaKnown RBP9.68□□□□□ -0.86
SNW1-206ENST00000556428 RAB3GAP2Q9H2M9 1393 aa9.67□□□□□ -0.86
SNW1-206ENST00000556428 DIP2AQ14689 1571 aa9.67□□□□□ -0.86
SNW1-206ENST00000556428 TOM1O60784 492 aa9.67□□□□□ -0.86
SNW1-206ENST00000556428 KCNA6P17658 529 aa9.67□□□□□ -0.86
SNW1-206ENST00000556428 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
SNW1-206ENST00000556428 CHD2O14647 1828 aaKnown RBP9.67□□□□□ -0.86
SNW1-206ENST00000556428 TMEM94Q12767 1356 aa9.67□□□□□ -0.86
SNW1-206ENST00000556428 CHMP4AQ9BY43 222 aa9.66□□□□□ -0.86
SNW1-206ENST00000556428 RRP9O43818 475 aaKnown RBP9.66□□□□□ -0.86
SNW1-206ENST00000556428 MPHOSPH9Q99550 1183 aa9.66□□□□□ -0.86
SNW1-206ENST00000556428 SETBP1Q9Y6X0 1596 aa9.66□□□□□ -0.86
SNW1-206ENST00000556428 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.86
SNW1-206ENST00000556428 GSE1Q14687 1217 aa9.64□□□□□ -0.87
SNW1-206ENST00000556428 TBX22Q9Y458 520 aa9.64□□□□□ -0.87
SNW1-206ENST00000556428 CDK11BP21127 795 aaKnown RBP9.64□□□□□ -0.87
SNW1-206ENST00000556428 NEFMP07197 916 aa9.63□□□□□ -0.87
SNW1-206ENST00000556428 PROSER2Q86WR7 435 aaPredicted RBP9.63□□□□□ -0.87
SNW1-206ENST00000556428 PTPRUQ92729 1446 aa9.63□□□□□ -0.87
SNW1-206ENST00000556428 PPLO60437 1756 aa9.63□□□□□ -0.87
SNW1-206ENST00000556428 PIK3R4Q99570 1358 aa9.63□□□□□ -0.87
SNW1-206ENST00000556428 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
SNW1-206ENST00000556428 ZMYND15Q9H091 742 aa9.63□□□□□ -0.87
SNW1-206ENST00000556428 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
SNW1-206ENST00000556428 HSPA1LP34931 641 aa9.62□□□□□ -0.87
SNW1-206ENST00000556428 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
SNW1-206ENST00000556428 ZBED9Q6R2W3 1325 aa9.62□□□□□ -0.87
SNW1-206ENST00000556428 METP08581 1390 aa9.61□□□□□ -0.87
SNW1-206ENST00000556428 PDIA4P13667 645 aaKnown RBP9.61□□□□□ -0.87
SNW1-206ENST00000556428 DDX10Q13206 875 aaKnown RBP9.61□□□□□ -0.87
SNW1-206ENST00000556428 DDRGK1Q96HY6 314 aa9.61□□□□□ -0.87
SNW1-206ENST00000556428 SPATA31E1Q6ZUB1 1445 aa9.61□□□□□ -0.87
SNW1-206ENST00000556428 SETD1AO15047 1707 aaKnown RBP9.61□□□□□ -0.87
SNW1-206ENST00000556428 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
SNW1-206ENST00000556428 MSH6P52701 1360 aa9.6□□□□□ -0.87
SNW1-206ENST00000556428 IFT172Q9UG01 1749 aa9.6□□□□□ -0.87
SNW1-206ENST00000556428 AMOTL2Q9Y2J4 779 aa9.6□□□□□ -0.87
SNW1-206ENST00000556428 CENPJQ9HC77 1338 aaPredicted RBP9.6□□□□□ -0.87
SNW1-206ENST00000556428 VGFO15240 615 aaPredicted RBP9.59□□□□□ -0.87
SNW1-206ENST00000556428 MS4A1P11836 297 aa9.59□□□□□ -0.87
SNW1-206ENST00000556428 RGL3Q3MIN7 710 aa9.59□□□□□ -0.87
SNW1-206ENST00000556428 ROBO1Q9Y6N7 1651 aa9.59□□□□□ -0.87
SNW1-206ENST00000556428 RPGRIP1LQ68CZ1 1315 aa9.59□□□□□ -0.87
SNW1-206ENST00000556428 SMG6Q86US8 1419 aaKnown RBP9.58□□□□□ -0.88
SNW1-206ENST00000556428 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.58□□□□□ -0.88
SNW1-206ENST00000556428 TCERG1O14776 1098 aaKnown RBP9.57□□□□□ -0.88
SNW1-206ENST00000556428 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
SNW1-206ENST00000556428 HNRNPUQ00839 825 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNW1-206ENST00000556428 NCOA3Q9Y6Q9 1424 aa9.57□□□□□ -0.88
SNW1-206ENST00000556428 ADGRF5Q8IZF2 1346 aa9.57□□□□□ -0.88
SNW1-206ENST00000556428 DISP3Q9P2K9 1392 aa9.57□□□□□ -0.88
SNW1-206ENST00000556428 FAM135BQ49AJ0 1406 aa9.57□□□□□ -0.88
SNW1-206ENST00000556428 HMGB1P09429 215 aaKnown RBP9.56□□□□□ -0.88
SNW1-206ENST00000556428 NALCNQ8IZF0 1738 aa9.56□□□□□ -0.88
SNW1-206ENST00000556428 ATXN8OSP0DMR3 200 aa9.55□□□□□ -0.88
SNW1-206ENST00000556428 HSP90B1P14625 803 aaKnown RBP9.55□□□□□ -0.88
SNW1-206ENST00000556428 ANKRD30BQ9BXX2 1392 aa9.55□□□□□ -0.88
SNW1-206ENST00000556428 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
SNW1-206ENST00000556428 PTCH1Q13635 1447 aa9.55□□□□□ -0.88
SNW1-206ENST00000556428 NECTIN2Q92692 538 aa9.55□□□□□ -0.88
SNW1-206ENST00000556428 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
SNW1-206ENST00000556428 MED1Q15648 1581 aaPredicted RBP9.54□□□□□ -0.88
SNW1-206ENST00000556428 ASXL1Q8IXJ9 1541 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 ZBTB7CA1YPR0 619 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 IFNLR1Q8IU57 520 aaPredicted RBP9.54□□□□□ -0.88
SNW1-206ENST00000556428 SLAIN2Q9P270 581 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 BRPF3Q9ULD4 1205 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 DCCP43146 1447 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 ADGRL3Q9HAR2 1447 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 CADPS2Q86UW7 1296 aa9.54□□□□□ -0.88
SNW1-206ENST00000556428 MYOM2P54296 1465 aa9.53□□□□□ -0.88
SNW1-206ENST00000556428 PRAG1Q86YV5 1406 aa9.53□□□□□ -0.88
SNW1-206ENST00000556428 ATF3P18847 181 aa9.53□□□□□ -0.88
SNW1-206ENST00000556428 B4GALNT3Q6L9W6 998 aa9.53□□□□□ -0.88
SNW1-206ENST00000556428 HSP90AA2PQ14568 343 aaPredicted RBP9.52□□□□□ -0.89
SNW1-206ENST00000556428 NRXN1Q9ULB1 1477 aa9.52□□□□□ -0.89
SNW1-206ENST00000556428 PHLPP1O60346 1717 aa9.52□□□□□ -0.89
SNW1-206ENST00000556428 ARID3AQ99856 593 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms