RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
SLIRP-206ENST00000556375 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
SLIRP-206ENST00000556375 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
SLIRP-206ENST00000556375 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
SLIRP-206ENST00000556375 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
SLIRP-206ENST00000556375 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
SLIRP-206ENST00000556375 WAPLQ7Z5K2 1190 aa16.71■□□□□ 0.27
SLIRP-206ENST00000556375 JCADQ9P266 1359 aa16.68■□□□□ 0.26
SLIRP-206ENST00000556375 SIN3AQ96ST3 1273 aa16.68■□□□□ 0.26
SLIRP-206ENST00000556375 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
SLIRP-206ENST00000556375 PRAM1Q96QH2 718 aa16.67■□□□□ 0.26
SLIRP-206ENST00000556375 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
SLIRP-206ENST00000556375 L3MBTL2Q969R5 705 aa16.65■□□□□ 0.26
SLIRP-206ENST00000556375 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
SLIRP-206ENST00000556375 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.25
SLIRP-206ENST00000556375 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
SLIRP-206ENST00000556375 POGKQ9P215 609 aa16.64■□□□□ 0.25
SLIRP-206ENST00000556375 ORAI2Q96SN7 254 aa16.63■□□□□ 0.25
SLIRP-206ENST00000556375 USP32Q8NFA0 1604 aa16.63■□□□□ 0.25
SLIRP-206ENST00000556375 SAFB2Q14151 953 aaKnown RBP eCLIP16.62■□□□□ 0.25
SLIRP-206ENST00000556375 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
SLIRP-206ENST00000556375 DDX17Q92841 729 aaKnown RBP16.6■□□□□ 0.25
SLIRP-206ENST00000556375 SPATA31A6Q5VVP1 1343 aa16.6■□□□□ 0.25
SLIRP-206ENST00000556375 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
SLIRP-206ENST00000556375 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
SLIRP-206ENST00000556375 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
SLIRP-206ENST00000556375 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
SLIRP-206ENST00000556375 NPHP3Q7Z494 1330 aa16.59■□□□□ 0.25
SLIRP-206ENST00000556375 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
SLIRP-206ENST00000556375 PXDNQ92626 1479 aa16.59■□□□□ 0.25
SLIRP-206ENST00000556375 LRP6O75581 1613 aa16.59■□□□□ 0.25
SLIRP-206ENST00000556375 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
SLIRP-206ENST00000556375 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
SLIRP-206ENST00000556375 LRRC59Q96AG4 307 aaKnown RBP16.58■□□□□ 0.24
SLIRP-206ENST00000556375 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
SLIRP-206ENST00000556375 TONSLQ96HA7 1378 aa16.58■□□□□ 0.24
SLIRP-206ENST00000556375 QRICH2Q9H0J4 1663 aa16.58■□□□□ 0.24
SLIRP-206ENST00000556375 COL22A1Q8NFW1 1626 aaPredicted RBP16.57■□□□□ 0.24
SLIRP-206ENST00000556375 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
SLIRP-206ENST00000556375 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
SLIRP-206ENST00000556375 HIRIP3Q9BW71 556 aaPredicted RBP16.55■□□□□ 0.24
SLIRP-206ENST00000556375 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
SLIRP-206ENST00000556375 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
SLIRP-206ENST00000556375 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
SLIRP-206ENST00000556375 ATP7BP35670 1465 aa16.54■□□□□ 0.24
SLIRP-206ENST00000556375 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
SLIRP-206ENST00000556375 GPRASP1Q5JY77 1395 aa16.53■□□□□ 0.24
SLIRP-206ENST00000556375 WASLO00401 505 aaPredicted RBP16.53■□□□□ 0.24
SLIRP-206ENST00000556375 FOXO3O43524 673 aa16.53■□□□□ 0.24
SLIRP-206ENST00000556375 ILDR2Q71H61 639 aa16.53■□□□□ 0.24
SLIRP-206ENST00000556375 PHF8Q9UPP1 1060 aa16.52■□□□□ 0.24
SLIRP-206ENST00000556375 CENPJQ9HC77 1338 aaPredicted RBP16.51■□□□□ 0.23
SLIRP-206ENST00000556375 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
SLIRP-206ENST00000556375 NBPF8Q3BBV2 869 aa16.5■□□□□ 0.23
SLIRP-206ENST00000556375 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
SLIRP-206ENST00000556375 CLSPNQ9HAW4 1339 aa16.49■□□□□ 0.23
SLIRP-206ENST00000556375 XPCQ01831 940 aaPredicted RBP16.49■□□□□ 0.23
SLIRP-206ENST00000556375 MARF1Q9Y4F3 1742 aaKnown RBP16.49■□□□□ 0.23
SLIRP-206ENST00000556375 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
SLIRP-206ENST00000556375 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
SLIRP-206ENST00000556375 RGS17Q9UGC6 210 aaPredicted RBP16.48■□□□□ 0.23
SLIRP-206ENST00000556375 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-206ENST00000556375 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-206ENST00000556375 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
SLIRP-206ENST00000556375 ABCA3Q99758 1704 aa16.47■□□□□ 0.23
SLIRP-206ENST00000556375 SPATA31A3Q5VYP0 1347 aa16.46■□□□□ 0.23
SLIRP-206ENST00000556375 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
SLIRP-206ENST00000556375 ALS2Q96Q42 1657 aa16.46■□□□□ 0.23
SLIRP-206ENST00000556375 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
SLIRP-206ENST00000556375 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
SLIRP-206ENST00000556375 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
SLIRP-206ENST00000556375 PSME1Q06323 249 aa16.44■□□□□ 0.22
SLIRP-206ENST00000556375 NUDT16Q96DE0 195 aaKnown RBP16.44■□□□□ 0.22
SLIRP-206ENST00000556375 ARHGEF10O15013 1369 aa16.43■□□□□ 0.22
SLIRP-206ENST00000556375 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
SLIRP-206ENST00000556375 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
SLIRP-206ENST00000556375 POLR3AO14802 1390 aaPredicted RBP16.41■□□□□ 0.22
SLIRP-206ENST00000556375 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
SLIRP-206ENST00000556375 CRYBG1Q9Y4K1 1723 aa16.41■□□□□ 0.22
SLIRP-206ENST00000556375 SRPK2P78362 688 aaKnown RBP16.4■□□□□ 0.22
SLIRP-206ENST00000556375 ZNF772Q68DY9 489 aaPredicted RBP16.4■□□□□ 0.22
SLIRP-206ENST00000556375 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
SLIRP-206ENST00000556375 NGDNQ8NEJ9 315 aaKnown RBP16.4■□□□□ 0.22
SLIRP-206ENST00000556375 AFF2P51816 1311 aa16.4■□□□□ 0.22
SLIRP-206ENST00000556375 EVC2Q86UK5 1308 aa16.4■□□□□ 0.22
SLIRP-206ENST00000556375 PPIP5K1Q6PFW1 1433 aa16.39■□□□□ 0.21
SLIRP-206ENST00000556375 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
SLIRP-206ENST00000556375 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
SLIRP-206ENST00000556375 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
SLIRP-206ENST00000556375 SOCS7O14512 581 aa16.38■□□□□ 0.21
SLIRP-206ENST00000556375 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
SLIRP-206ENST00000556375 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
SLIRP-206ENST00000556375 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
SLIRP-206ENST00000556375 ACEP12821 1306 aa16.36■□□□□ 0.21
SLIRP-206ENST00000556375 AKAP12Q02952 1782 aa16.36■□□□□ 0.21
SLIRP-206ENST00000556375 PHRF1Q9P1Y6 1649 aaKnown RBP16.35■□□□□ 0.21
SLIRP-206ENST00000556375 PLCH1Q4KWH8 1693 aa16.35■□□□□ 0.21
SLIRP-206ENST00000556375 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
SLIRP-206ENST00000556375 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
SLIRP-206ENST00000556375 NGLY1Q96IV0 654 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms