RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 C9orf78Q9NZ63 289 aaPredicted RBP19.11■□□□□ 0.65
LRP1-211ENST00000556356 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
LRP1-211ENST00000556356 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
LRP1-211ENST00000556356 TOM1L2Q6ZVM7 507 aa19.1■□□□□ 0.65
LRP1-211ENST00000556356 SYCP2Q9BX26 1530 aa19.1■□□□□ 0.65
LRP1-211ENST00000556356 TRIM6-TRIM34B2RNG4 842 aa19.09■□□□□ 0.65
LRP1-211ENST00000556356 CDK11BP21127 795 aaKnown RBP19.09■□□□□ 0.65
LRP1-211ENST00000556356 ABCC10Q5T3U5 1492 aa19.09■□□□□ 0.65
LRP1-211ENST00000556356 DUOX2Q9NRD8 1548 aa19.08■□□□□ 0.65
LRP1-211ENST00000556356 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.64
LRP1-211ENST00000556356 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
LRP1-211ENST00000556356 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
LRP1-211ENST00000556356 ADGRF5Q8IZF2 1346 aa19.07■□□□□ 0.64
LRP1-211ENST00000556356 PRKAR2BP31323 418 aa19.07■□□□□ 0.64
LRP1-211ENST00000556356 TPRNQ4KMQ1 711 aa19.06■□□□□ 0.64
LRP1-211ENST00000556356 TRAPPC8Q9Y2L5 1435 aa19.05■□□□□ 0.64
LRP1-211ENST00000556356 NOS1P29475 1434 aa19.05■□□□□ 0.64
LRP1-211ENST00000556356 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
LRP1-211ENST00000556356 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
LRP1-211ENST00000556356 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
LRP1-211ENST00000556356 ADAMTS8Q9UP79 889 aa19.04■□□□□ 0.64
LRP1-211ENST00000556356 DISP1Q96F81 1524 aa19.03■□□□□ 0.64
LRP1-211ENST00000556356 TCP11L2Q8N4U5 519 aa19.03■□□□□ 0.64
LRP1-211ENST00000556356 SULT6B1Q6IMI4 303 aa19.02■□□□□ 0.64
LRP1-211ENST00000556356 SPG7Q9UQ90 795 aa19.02■□□□□ 0.64
LRP1-211ENST00000556356 PHF8Q9UPP1 1060 aa19.02■□□□□ 0.64
LRP1-211ENST00000556356 KIF16BQ96L93 1317 aa19.01■□□□□ 0.63
LRP1-211ENST00000556356 UHRF1BP1LA0JNW5 1464 aa19.01■□□□□ 0.63
LRP1-211ENST00000556356 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
LRP1-211ENST00000556356 RIC3Q7Z5B4 369 aa19.01■□□□□ 0.63
LRP1-211ENST00000556356 RRP1P56182 461 aaKnown RBP19■□□□□ 0.63
LRP1-211ENST00000556356 DZIP1LQ8IYY4 767 aaKnown RBP19■□□□□ 0.63
LRP1-211ENST00000556356 WASLO00401 505 aaPredicted RBP19■□□□□ 0.63
LRP1-211ENST00000556356 ZC3H6P61129 1189 aaKnown RBP18.99■□□□□ 0.63
LRP1-211ENST00000556356 COG6Q9Y2V7 657 aa18.99■□□□□ 0.63
LRP1-211ENST00000556356 C14orf93Q9H972 538 aaKnown RBP18.99■□□□□ 0.63
LRP1-211ENST00000556356 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
LRP1-211ENST00000556356 PLIN1O60240 522 aa18.99■□□□□ 0.63
LRP1-211ENST00000556356 RBM42Q9BTD8 480 aaKnown RBP18.99■□□□□ 0.63
LRP1-211ENST00000556356 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
LRP1-211ENST00000556356 AIMP1Q12904 312 aaKnown RBP18.98■□□□□ 0.63
LRP1-211ENST00000556356 DDX54Q8TDD1 881 aaKnown RBP18.98■□□□□ 0.63
LRP1-211ENST00000556356 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
LRP1-211ENST00000556356 GNL2Q13823 731 aaKnown RBP18.97■□□□□ 0.63
LRP1-211ENST00000556356 GOLGA6L4A6NEF3 574 aa18.97■□□□□ 0.63
LRP1-211ENST00000556356 RRS1Q15050 365 aaKnown RBP18.97■□□□□ 0.63
LRP1-211ENST00000556356 TULP1O00294 542 aaPredicted RBP18.96■□□□□ 0.63
LRP1-211ENST00000556356 CABP4P57796 275 aa18.96■□□□□ 0.63
LRP1-211ENST00000556356 LRPPRCP42704 1394 aaKnown RBP18.96■□□□□ 0.63
LRP1-211ENST00000556356 RBM33Q96EV2 1170 aaKnown RBP18.96■□□□□ 0.63
LRP1-211ENST00000556356 ANKRD45Q5TZF3 282 aa18.95■□□□□ 0.62
LRP1-211ENST00000556356 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
LRP1-211ENST00000556356 FOXO3O43524 673 aa18.95■□□□□ 0.62
LRP1-211ENST00000556356 CADPS2Q86UW7 1296 aa18.95■□□□□ 0.62
LRP1-211ENST00000556356 PNISRQ8TF01 805 aaKnown RBP18.95■□□□□ 0.62
LRP1-211ENST00000556356 TARBP1Q13395 1621 aaKnown RBP18.95■□□□□ 0.62
LRP1-211ENST00000556356 LRRFIP1Q32MZ4 808 aaKnown RBP18.94■□□□□ 0.62
LRP1-211ENST00000556356 MFAP1P55081 439 aaKnown RBP18.93■□□□□ 0.62
LRP1-211ENST00000556356 G3BP1Q13283 466 aaKnown RBP eCLIP18.93■□□□□ 0.623e-9■□□□□ 8.8
LRP1-211ENST00000556356 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
LRP1-211ENST00000556356 RPRD2Q5VT52 1461 aaKnown RBP18.93■□□□□ 0.62
LRP1-211ENST00000556356 CENPQQ7L2Z9 268 aaPredicted RBP18.92■□□□□ 0.62
LRP1-211ENST00000556356 KLHL34Q8N239 644 aa18.92■□□□□ 0.62
LRP1-211ENST00000556356 SCAF11Q99590 1463 aaKnown RBP18.92■□□□□ 0.62
LRP1-211ENST00000556356 TOMM22Q9NS69 142 aa18.92■□□□□ 0.62
LRP1-211ENST00000556356 KIF6Q6ZMV9 814 aa18.91■□□□□ 0.62
LRP1-211ENST00000556356 VPS37DQ86XT2 251 aa18.91■□□□□ 0.62
LRP1-211ENST00000556356 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
LRP1-211ENST00000556356 HSP90B1P14625 803 aaKnown RBP18.9■□□□□ 0.62
LRP1-211ENST00000556356 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
LRP1-211ENST00000556356 RIMS2Q9UQ26 1411 aa18.9■□□□□ 0.62
LRP1-211ENST00000556356 MSH6P52701 1360 aa18.9■□□□□ 0.62
LRP1-211ENST00000556356 IFIT2P09913 472 aaKnown RBP18.9■□□□□ 0.62
LRP1-211ENST00000556356 HSP90AB4PQ58FF6 505 aa18.9■□□□□ 0.62
LRP1-211ENST00000556356 RILPL2Q969X0 211 aa18.89■□□□□ 0.62
LRP1-211ENST00000556356 EXOC6Q8TAG9 804 aa18.89■□□□□ 0.61
LRP1-211ENST00000556356 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
LRP1-211ENST00000556356 SHANK2Q9UPX8 1470 aa18.89■□□□□ 0.61
LRP1-211ENST00000556356 KRT28Q7Z3Y7 464 aa18.88■□□□□ 0.61
LRP1-211ENST00000556356 FCHSD2O94868 740 aa18.88■□□□□ 0.61
LRP1-211ENST00000556356 ZMYM3Q14202 1370 aa18.87■□□□□ 0.61
LRP1-211ENST00000556356 NME9Q86XW9 330 aa18.87■□□□□ 0.61
LRP1-211ENST00000556356 TWISTNBQ3B726 338 aaPredicted RBP18.87■□□□□ 0.61
LRP1-211ENST00000556356 UBTFL1P0CB47 393 aaPredicted RBP18.87■□□□□ 0.61
LRP1-211ENST00000556356 SPRYD3Q8NCJ5 442 aa18.87■□□□□ 0.61
LRP1-211ENST00000556356 ATP10AO60312 1499 aa18.87■□□□□ 0.61
LRP1-211ENST00000556356 CFAP43Q8NDM7 1665 aa18.86■□□□□ 0.61
LRP1-211ENST00000556356 ADAMTS2O95450 1211 aa18.86■□□□□ 0.61
LRP1-211ENST00000556356 EXOSC9Q06265 439 aaKnown RBP18.85■□□□□ 0.61
LRP1-211ENST00000556356 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
LRP1-211ENST00000556356 HDGFL1Q5TGJ6 251 aa18.85■□□□□ 0.61
LRP1-211ENST00000556356 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
LRP1-211ENST00000556356 DIAPH3Q9NSV4 1193 aa18.85■□□□□ 0.61
LRP1-211ENST00000556356 TOM1O60784 492 aa18.84■□□□□ 0.61
LRP1-211ENST00000556356 AMOTL1Q8IY63 956 aa18.84■□□□□ 0.61
LRP1-211ENST00000556356 NINLQ9Y2I6 1382 aa18.83■□□□□ 0.6
LRP1-211ENST00000556356 GNAI3P08754 354 aa18.83■□□□□ 0.6
LRP1-211ENST00000556356 AAMPQ13685 434 aa18.83■□□□□ 0.6
LRP1-211ENST00000556356 FBXW7Q969H0 707 aa18.83■□□□□ 0.6
LRP1-211ENST00000556356 NGLY1Q96IV0 654 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms