RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
SNX6-206ENST00000556162 UBAP1LF5GYI3 381 aa20.02■□□□□ 0.8
SNX6-206ENST00000556162 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.8
SNX6-206ENST00000556162 CENPJQ9HC77 1338 aaPredicted RBP20.01■□□□□ 0.79
SNX6-206ENST00000556162 MINK1Q8N4C8 1332 aaPredicted RBP20■□□□□ 0.79
SNX6-206ENST00000556162 ARHGEF28Q8N1W1 1705 aaKnown RBP19.99■□□□□ 0.79
SNX6-206ENST00000556162 DCCP43146 1447 aa19.98■□□□□ 0.79
SNX6-206ENST00000556162 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
SNX6-206ENST00000556162 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.97■□□□□ 0.79
SNX6-206ENST00000556162 SLAIN2Q9P270 581 aa19.96■□□□□ 0.79
SNX6-206ENST00000556162 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
SNX6-206ENST00000556162 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
SNX6-206ENST00000556162 USP47Q96K76 1375 aa19.94■□□□□ 0.78
SNX6-206ENST00000556162 ST20-MTHFSA0A0A6YYL1 179 aa19.94■□□□□ 0.78
SNX6-206ENST00000556162 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
SNX6-206ENST00000556162 WASLO00401 505 aaPredicted RBP19.93■□□□□ 0.78
SNX6-206ENST00000556162 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
SNX6-206ENST00000556162 FBXO41Q8TF61 875 aa19.92■□□□□ 0.78
SNX6-206ENST00000556162 CDC42BPGQ6DT37 1551 aa19.92■□□□□ 0.78
SNX6-206ENST00000556162 NUTM2FA1L443 756 aa19.91■□□□□ 0.78
SNX6-206ENST00000556162 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
SNX6-206ENST00000556162 SLC24A1O60721 1099 aa19.9■□□□□ 0.78
SNX6-206ENST00000556162 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
SNX6-206ENST00000556162 MST1RQ04912 1400 aa19.9■□□□□ 0.78
SNX6-206ENST00000556162 ADGRB2O60241 1585 aa19.89■□□□□ 0.77
SNX6-206ENST00000556162 QRICH2Q9H0J4 1663 aa19.89■□□□□ 0.77
SNX6-206ENST00000556162 EVC2Q86UK5 1308 aa19.89■□□□□ 0.77
SNX6-206ENST00000556162 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
SNX6-206ENST00000556162 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
SNX6-206ENST00000556162 C1orf167Q5SNV9 1468 aa19.87■□□□□ 0.77
SNX6-206ENST00000556162 TESK2Q96S53 571 aa19.86■□□□□ 0.77
SNX6-206ENST00000556162 HSPA5P11021 654 aaKnown RBP19.86■□□□□ 0.77
SNX6-206ENST00000556162 ESCO1Q5FWF5 840 aa19.86■□□□□ 0.77
SNX6-206ENST00000556162 ORAI2Q96SN7 254 aa19.84■□□□□ 0.77
SNX6-206ENST00000556162 CABP2Q9NPB3 220 aa19.84■□□□□ 0.77
SNX6-206ENST00000556162 FMN2Q9NZ56 1722 aa19.84■□□□□ 0.77
SNX6-206ENST00000556162 BRINP3Q76B58 766 aa19.84■□□□□ 0.77
SNX6-206ENST00000556162 NUDT16Q96DE0 195 aaKnown RBP19.84■□□□□ 0.77
SNX6-206ENST00000556162 ANKARQ7Z5J8 1434 aa19.83■□□□□ 0.76
SNX6-206ENST00000556162 TULP4Q9NRJ4 1543 aa19.82■□□□□ 0.76
SNX6-206ENST00000556162 TMF1P82094 1093 aa19.82■□□□□ 0.76
SNX6-206ENST00000556162 PRR36Q9H6K5 1346 aa19.81■□□□□ 0.76
SNX6-206ENST00000556162 CCDC61Q9Y6R9 512 aa19.81■□□□□ 0.76
SNX6-206ENST00000556162 PHF8Q9UPP1 1060 aa19.79■□□□□ 0.76
SNX6-206ENST00000556162 ROBO1Q9Y6N7 1651 aa19.79■□□□□ 0.76
SNX6-206ENST00000556162 CDCA8Q53HL2 280 aa19.77■□□□□ 0.76
SNX6-206ENST00000556162 PMFBP1Q8TBY8 1022 aa19.77■□□□□ 0.76
SNX6-206ENST00000556162 PUS7Q96PZ0 661 aaKnown RBP19.77■□□□□ 0.76
SNX6-206ENST00000556162 ATP7BP35670 1465 aa19.77■□□□□ 0.76
SNX6-206ENST00000556162 FOXO3O43524 673 aa19.76■□□□□ 0.75
SNX6-206ENST00000556162 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
SNX6-206ENST00000556162 ATAD2Q6PL18 1390 aa19.76■□□□□ 0.75
SNX6-206ENST00000556162 DISP3Q9P2K9 1392 aa19.75■□□□□ 0.75
SNX6-206ENST00000556162 RGPD8O14715 1765 aaPredicted RBP19.74■□□□□ 0.75
SNX6-206ENST00000556162 NGDNQ8NEJ9 315 aaKnown RBP19.74■□□□□ 0.75
SNX6-206ENST00000556162 DDX17Q92841 729 aaKnown RBP19.74■□□□□ 0.75
SNX6-206ENST00000556162 CABP1Q9NZU7 370 aa19.74■□□□□ 0.75
SNX6-206ENST00000556162 NPHP3Q7Z494 1330 aa19.73■□□□□ 0.75
SNX6-206ENST00000556162 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
SNX6-206ENST00000556162 HSPA1LP34931 641 aa19.73■□□□□ 0.75
SNX6-206ENST00000556162 ILDR1Q86SU0 546 aaPredicted RBP19.73■□□□□ 0.75
SNX6-206ENST00000556162 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
SNX6-206ENST00000556162 PSME1Q06323 249 aa19.72■□□□□ 0.75
SNX6-206ENST00000556162 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
SNX6-206ENST00000556162 KIF1AQ12756 1690 aa19.7■□□□□ 0.74
SNX6-206ENST00000556162 ITSN1Q15811 1721 aa19.7■□□□□ 0.74
SNX6-206ENST00000556162 ACEP12821 1306 aa19.7■□□□□ 0.74
SNX6-206ENST00000556162 KRT28Q7Z3Y7 464 aa19.69■□□□□ 0.74
SNX6-206ENST00000556162 AHDC1Q5TGY3 1603 aaPredicted RBP19.69■□□□□ 0.74
SNX6-206ENST00000556162 XPCQ01831 940 aaPredicted RBP19.69■□□□□ 0.74
SNX6-206ENST00000556162 POLR3GLQ9BT43 218 aa19.69■□□□□ 0.74
SNX6-206ENST00000556162 SOS2Q07890 1332 aaPredicted RBP19.68■□□□□ 0.74
SNX6-206ENST00000556162 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
SNX6-206ENST00000556162 LRRC59Q96AG4 307 aaKnown RBP19.67■□□□□ 0.74
SNX6-206ENST00000556162 TOPAZ1Q8N9V7 1692 aa19.67■□□□□ 0.74
SNX6-206ENST00000556162 POLR3AO14802 1390 aaPredicted RBP19.67■□□□□ 0.74
SNX6-206ENST00000556162 NHSL1Q5SYE7 1610 aa19.67■□□□□ 0.74
SNX6-206ENST00000556162 C11orf95C9JLR9 678 aaPredicted RBP19.66■□□□□ 0.74
SNX6-206ENST00000556162 ZNF692Q9BU19 519 aaPredicted RBP19.66■□□□□ 0.74
SNX6-206ENST00000556162 PHLPP1O60346 1717 aa19.66■□□□□ 0.74
SNX6-206ENST00000556162 NINLQ9Y2I6 1382 aa19.65■□□□□ 0.74
SNX6-206ENST00000556162 TERF2IPQ9NYB0 399 aa19.65■□□□□ 0.74
SNX6-206ENST00000556162 HDGFL2Q7Z4V5 671 aaPredicted RBP19.64■□□□□ 0.73
SNX6-206ENST00000556162 PXDNQ92626 1479 aa19.63■□□□□ 0.73
SNX6-206ENST00000556162 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
SNX6-206ENST00000556162 COL16A1Q07092 1604 aaPredicted RBP19.61■□□□□ 0.73
SNX6-206ENST00000556162 KIF7Q2M1P5 1343 aa19.61■□□□□ 0.73
SNX6-206ENST00000556162 SBNO1A3KN83 1393 aa19.6■□□□□ 0.73
SNX6-206ENST00000556162 LMOD2Q6P5Q4 547 aa19.6■□□□□ 0.73
SNX6-206ENST00000556162 SPATA31A3Q5VYP0 1347 aa19.6■□□□□ 0.73
SNX6-206ENST00000556162 KTN1Q86UP2 1357 aaKnown RBP19.6■□□□□ 0.73
SNX6-206ENST00000556162 JCADQ9P266 1359 aa19.6■□□□□ 0.73
SNX6-206ENST00000556162 CPSF1Q10570 1443 aaKnown RBP19.6■□□□□ 0.73
SNX6-206ENST00000556162 BRD4O60885 1362 aaPredicted RBP19.58■□□□□ 0.73
SNX6-206ENST00000556162 USP6P35125 1406 aa19.58■□□□□ 0.72
SNX6-206ENST00000556162 A0A1W2PP64 1363 aa19.57■□□□□ 0.72
SNX6-206ENST00000556162 CD163L1Q9NR16 1453 aa19.57■□□□□ 0.72
SNX6-206ENST00000556162 ANKRD36BQ8N2N9 1353 aa19.57■□□□□ 0.72
SNX6-206ENST00000556162 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
SNX6-206ENST00000556162 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms