RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 DDX17Q92841 729 aaKnown RBP20.3■□□□□ 0.84
PCNX4-209ENST00000555569 C14orf93Q9H972 538 aaKnown RBP20.3■□□□□ 0.84
PCNX4-209ENST00000555569 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
PCNX4-209ENST00000555569 LRRC59Q96AG4 307 aaKnown RBP20.29■□□□□ 0.84
PCNX4-209ENST00000555569 MEX3CQ5U5Q3 659 aaKnown RBP20.28■□□□□ 0.84
PCNX4-209ENST00000555569 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
PCNX4-209ENST00000555569 CFAP70Q5T0N1 1121 aa20.27■□□□□ 0.84
PCNX4-209ENST00000555569 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
PCNX4-209ENST00000555569 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
PCNX4-209ENST00000555569 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
PCNX4-209ENST00000555569 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
PCNX4-209ENST00000555569 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
PCNX4-209ENST00000555569 SIRT1Q96EB6 747 aa20.25■□□□□ 0.83
PCNX4-209ENST00000555569 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
PCNX4-209ENST00000555569 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
PCNX4-209ENST00000555569 FMN2Q9NZ56 1722 aa20.22■□□□□ 0.83
PCNX4-209ENST00000555569 ESCO1Q5FWF5 840 aa20.22■□□□□ 0.83
PCNX4-209ENST00000555569 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
PCNX4-209ENST00000555569 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
PCNX4-209ENST00000555569 ZNF772Q68DY9 489 aaPredicted RBP20.2■□□□□ 0.82
PCNX4-209ENST00000555569 NUTM2FA1L443 756 aa20.19■□□□□ 0.82
PCNX4-209ENST00000555569 STAC3Q96MF2 364 aa20.19■□□□□ 0.82
PCNX4-209ENST00000555569 NPHP3Q7Z494 1330 aa20.19■□□□□ 0.82
PCNX4-209ENST00000555569 DLC1Q96QB1 1528 aa20.18■□□□□ 0.82
PCNX4-209ENST00000555569 ADGRB1O14514 1584 aa20.18■□□□□ 0.82
PCNX4-209ENST00000555569 PRAM1Q96QH2 718 aa20.16■□□□□ 0.82
PCNX4-209ENST00000555569 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
PCNX4-209ENST00000555569 FOXO3O43524 673 aa20.15■□□□□ 0.82
PCNX4-209ENST00000555569 SAFB2Q14151 953 aaKnown RBP eCLIP20.15■□□□□ 0.82
PCNX4-209ENST00000555569 AFF2P51816 1311 aa20.15■□□□□ 0.82
PCNX4-209ENST00000555569 PXDNQ92626 1479 aa20.15■□□□□ 0.82
PCNX4-209ENST00000555569 KIF1AQ12756 1690 aa20.15■□□□□ 0.82
PCNX4-209ENST00000555569 COL22A1Q8NFW1 1626 aaPredicted RBP20.14■□□□□ 0.81
PCNX4-209ENST00000555569 POGKQ9P215 609 aa20.14■□□□□ 0.81
PCNX4-209ENST00000555569 XPCQ01831 940 aaPredicted RBP20.12■□□□□ 0.81
PCNX4-209ENST00000555569 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
PCNX4-209ENST00000555569 TRAK1Q9UPV9 953 aa20.12■□□□□ 0.81
PCNX4-209ENST00000555569 ADGRB2O60241 1585 aa20.1■□□□□ 0.81
PCNX4-209ENST00000555569 ADAMTS2O95450 1211 aa20.1■□□□□ 0.81
PCNX4-209ENST00000555569 RXRBP28702 533 aa20.08■□□□□ 0.81
PCNX4-209ENST00000555569 NGLY1Q96IV0 654 aa20.08■□□□□ 0.81
PCNX4-209ENST00000555569 PHF8Q9UPP1 1060 aa20.08■□□□□ 0.81
PCNX4-209ENST00000555569 ANKARQ7Z5J8 1434 aa20.06■□□□□ 0.8
PCNX4-209ENST00000555569 ARHGEF28Q8N1W1 1705 aaKnown RBP20.06■□□□□ 0.8
PCNX4-209ENST00000555569 KIAA1210Q9ULL0 1709 aa20.06■□□□□ 0.8
PCNX4-209ENST00000555569 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
PCNX4-209ENST00000555569 MINK1Q8N4C8 1332 aaPredicted RBP20.05■□□□□ 0.8
PCNX4-209ENST00000555569 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
PCNX4-209ENST00000555569 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
PCNX4-209ENST00000555569 SPATA31A3Q5VYP0 1347 aa20.04■□□□□ 0.8
PCNX4-209ENST00000555569 HIRIP3Q9BW71 556 aaPredicted RBP20.04■□□□□ 0.8
PCNX4-209ENST00000555569 QTRT2Q9H974 415 aaKnown RBP20.04■□□□□ 0.8
PCNX4-209ENST00000555569 CDK12Q9NYV4 1490 aaPredicted RBP20.04■□□□□ 0.8
PCNX4-209ENST00000555569 EIF3AQ14152 1382 aaKnown RBP20.03■□□□□ 0.8
PCNX4-209ENST00000555569 PSME1Q06323 249 aa20.02■□□□□ 0.8
PCNX4-209ENST00000555569 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
PCNX4-209ENST00000555569 WASLO00401 505 aaPredicted RBP20■□□□□ 0.79
PCNX4-209ENST00000555569 RBM6P78332 1123 aaKnown RBP20■□□□□ 0.79
PCNX4-209ENST00000555569 FNBP4Q8N3X1 1017 aaPredicted RBP20■□□□□ 0.79
PCNX4-209ENST00000555569 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
PCNX4-209ENST00000555569 USP21Q9UK80 565 aa20■□□□□ 0.79
PCNX4-209ENST00000555569 TNS3Q68CZ2 1445 aa20■□□□□ 0.79
PCNX4-209ENST00000555569 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
PCNX4-209ENST00000555569 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
PCNX4-209ENST00000555569 TRPC5Q9UL62 973 aaPredicted RBP19.97■□□□□ 0.79
PCNX4-209ENST00000555569 NBPF1Q3BBV0 1214 aa19.96■□□□□ 0.79
PCNX4-209ENST00000555569 ITSN1Q15811 1721 aa19.96■□□□□ 0.79
PCNX4-209ENST00000555569 RGS12O14924 1447 aa19.95■□□□□ 0.78
PCNX4-209ENST00000555569 TRPM3Q9HCF6 1732 aaPredicted RBP19.95■□□□□ 0.78
PCNX4-209ENST00000555569 ARHGEF10O15013 1369 aa19.95■□□□□ 0.78
PCNX4-209ENST00000555569 ATRNO75882 1429 aa19.94■□□□□ 0.78
PCNX4-209ENST00000555569 LMOD2Q6P5Q4 547 aa19.94■□□□□ 0.78
PCNX4-209ENST00000555569 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
PCNX4-209ENST00000555569 L3MBTL2Q969R5 705 aa19.93■□□□□ 0.78
PCNX4-209ENST00000555569 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
PCNX4-209ENST00000555569 GPRASP1Q5JY77 1395 aa19.93■□□□□ 0.78
PCNX4-209ENST00000555569 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
PCNX4-209ENST00000555569 HAP1P54257 671 aaPredicted RBP19.92■□□□□ 0.78
PCNX4-209ENST00000555569 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.92■□□□□ 0.78
PCNX4-209ENST00000555569 ATP7BP35670 1465 aa19.92■□□□□ 0.78
PCNX4-209ENST00000555569 NGDNQ8NEJ9 315 aaKnown RBP19.91■□□□□ 0.78
PCNX4-209ENST00000555569 CABLES1Q8TDN4 633 aa19.91■□□□□ 0.78
PCNX4-209ENST00000555569 UPF1Q92900 1129 aaKnown RBP eCLIP19.91■□□□□ 0.78
PCNX4-209ENST00000555569 NUDT16Q96DE0 195 aaKnown RBP19.91■□□□□ 0.78
PCNX4-209ENST00000555569 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
PCNX4-209ENST00000555569 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
PCNX4-209ENST00000555569 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
PCNX4-209ENST00000555569 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
PCNX4-209ENST00000555569 SLIT2O94813 1529 aa19.9■□□□□ 0.78
PCNX4-209ENST00000555569 TOPAZ1Q8N9V7 1692 aa19.87■□□□□ 0.77
PCNX4-209ENST00000555569 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
PCNX4-209ENST00000555569 CENPJQ9HC77 1338 aaPredicted RBP19.87■□□□□ 0.77
PCNX4-209ENST00000555569 UNC5CLQ8IV45 518 aa19.87■□□□□ 0.77
PCNX4-209ENST00000555569 PLCH1Q4KWH8 1693 aa19.86■□□□□ 0.77
PCNX4-209ENST00000555569 QRICH2Q9H0J4 1663 aa19.86■□□□□ 0.77
PCNX4-209ENST00000555569 NWD2Q9ULI1 1742 aa19.85■□□□□ 0.77
PCNX4-209ENST00000555569 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
PCNX4-209ENST00000555569 PAK3O75914 559 aaPredicted RBP19.84■□□□□ 0.77
PCNX4-209ENST00000555569 CCDC61Q9Y6R9 512 aa19.84■□□□□ 0.77
PCNX4-209ENST00000555569 CRYBG1Q9Y4K1 1723 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms