RNA–Protein interactions for RNA: ENST00000555498.5

KTN1-221, Transcript of kinectin 1, humanhuman

APPRIS ALT2 TSL 3

Gene KTN1, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-221ENST00000555498 CDC42BPGQ6DT37 1551 aa29.74■■■□□ 2.35
KTN1-221ENST00000555498 TECPR2O15040 1411 aa29.73■■■□□ 2.35
KTN1-221ENST00000555498 STK26Q9P289 416 aa29.73■■■□□ 2.35
KTN1-221ENST00000555498 LRPPRCP42704 1394 aaKnown RBP29.73■■■□□ 2.35
KTN1-221ENST00000555498 ABCC11Q96J66 1382 aa29.72■■■□□ 2.35
KTN1-221ENST00000555498 ESCO1Q5FWF5 840 aa29.71■■■□□ 2.35
KTN1-221ENST00000555498 QTRT2Q9H974 415 aaKnown RBP29.71■■■□□ 2.35
KTN1-221ENST00000555498 NPHP3Q7Z494 1330 aa29.71■■■□□ 2.35
KTN1-221ENST00000555498 NGLY1Q96IV0 654 aa29.7■■■□□ 2.35
KTN1-221ENST00000555498 ADAMTS2O95450 1211 aa29.69■■■□□ 2.34
KTN1-221ENST00000555498 UPF1Q92900 1129 aaKnown RBP eCLIP29.69■■■□□ 2.34
KTN1-221ENST00000555498 PIK3C2GO75747 1445 aa29.69■■■□□ 2.34
KTN1-221ENST00000555498 RBM6P78332 1123 aaKnown RBP29.68■■■□□ 2.34
KTN1-221ENST00000555498 WAPLQ7Z5K2 1190 aa29.68■■■□□ 2.34
KTN1-221ENST00000555498 TMEM132EQ6IEE7 984 aa29.67■■■□□ 2.34
KTN1-221ENST00000555498 KNDC1Q76NI1 1749 aa29.67■■■□□ 2.34
KTN1-221ENST00000555498 SIRT1Q96EB6 747 aa29.63■■■□□ 2.33
KTN1-221ENST00000555498 COL22A1Q8NFW1 1626 aaPredicted RBP29.63■■■□□ 2.33
KTN1-221ENST00000555498 YTHDC2Q9H6S0 1430 aaKnown RBP29.62■■■□□ 2.33
KTN1-221ENST00000555498 FOXO3O43524 673 aa29.61■■■□□ 2.33
KTN1-221ENST00000555498 C14orf93Q9H972 538 aaKnown RBP29.61■■■□□ 2.33
KTN1-221ENST00000555498 PXDNQ92626 1479 aa29.6■■■□□ 2.33
KTN1-221ENST00000555498 USP21Q9UK80 565 aa29.59■■■□□ 2.33
KTN1-221ENST00000555498 NUTM2FA1L443 756 aa29.58■■■□□ 2.33
KTN1-221ENST00000555498 FNBP4Q8N3X1 1017 aaPredicted RBP29.58■■■□□ 2.33
KTN1-221ENST00000555498 PLEKHH1Q9ULM0 1364 aa29.58■■■□□ 2.33
KTN1-221ENST00000555498 DHX57Q6P158 1386 aaKnown RBP29.57■■■□□ 2.32
KTN1-221ENST00000555498 MYOM2P54296 1465 aa29.56■■■□□ 2.32
KTN1-221ENST00000555498 NRXN1Q9ULB1 1477 aa29.56■■■□□ 2.32
KTN1-221ENST00000555498 TRPC5Q9UL62 973 aaPredicted RBP29.56■■■□□ 2.32
KTN1-221ENST00000555498 RGS12O14924 1447 aa29.55■■■□□ 2.32
KTN1-221ENST00000555498 RAB3GAP2Q9H2M9 1393 aa29.55■■■□□ 2.32
KTN1-221ENST00000555498 FMN2Q9NZ56 1722 aa29.55■■■□□ 2.32
KTN1-221ENST00000555498 XPCQ01831 940 aaPredicted RBP29.54■■■□□ 2.32
KTN1-221ENST00000555498 CFAP70Q5T0N1 1121 aa29.53■■■□□ 2.32
KTN1-221ENST00000555498 KIF1AQ12756 1690 aa29.52■■■□□ 2.32
KTN1-221ENST00000555498 MARF1Q9Y4F3 1742 aaKnown RBP29.48■■■□□ 2.31
KTN1-221ENST00000555498 SPATA31A3Q5VYP0 1347 aa29.46■■■□□ 2.31
KTN1-221ENST00000555498 ATRNO75882 1429 aa29.46■■■□□ 2.31
KTN1-221ENST00000555498 KRT28Q7Z3Y7 464 aa29.46■■■□□ 2.31
KTN1-221ENST00000555498 PRAM1Q96QH2 718 aa29.45■■■□□ 2.31
KTN1-221ENST00000555498 PSME1Q06323 249 aa29.44■■■□□ 2.3
KTN1-221ENST00000555498 PHF8Q9UPP1 1060 aa29.44■■■□□ 2.3
KTN1-221ENST00000555498 POGKQ9P215 609 aa29.43■■■□□ 2.3
KTN1-221ENST00000555498 ATAD2Q6PL18 1390 aa29.42■■■□□ 2.3
KTN1-221ENST00000555498 RGPD8O14715 1765 aaPredicted RBP29.42■■■□□ 2.3
KTN1-221ENST00000555498 DLC1Q96QB1 1528 aa29.42■■■□□ 2.3
KTN1-221ENST00000555498 BCL9LQ86UU0 1499 aa29.42■■■□□ 2.3
KTN1-221ENST00000555498 HRCP23327 699 aa29.41■■■□□ 2.3
KTN1-221ENST00000555498 STAC3Q96MF2 364 aa29.41■■■□□ 2.3
KTN1-221ENST00000555498 SAFB2Q14151 953 aaKnown RBP eCLIP29.4■■■□□ 2.3
KTN1-221ENST00000555498 DCAF11Q8TEB1 546 aa29.36■■■□□ 2.29
KTN1-221ENST00000555498 GJD4Q96KN9 370 aaPredicted RBP29.36■■■□□ 2.29
KTN1-221ENST00000555498 KDM2AQ9Y2K7 1162 aa29.36■■■□□ 2.29
KTN1-221ENST00000555498 TNS3Q68CZ2 1445 aa29.36■■■□□ 2.29
KTN1-221ENST00000555498 ANKARQ7Z5J8 1434 aa29.35■■■□□ 2.29
KTN1-221ENST00000555498 ADGRB1O14514 1584 aa29.35■■■□□ 2.29
KTN1-221ENST00000555498 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.34■■■□□ 2.29
KTN1-221ENST00000555498 HAP1P54257 671 aaPredicted RBP29.34■■■□□ 2.29
KTN1-221ENST00000555498 UNC5CLQ8IV45 518 aa29.34■■■□□ 2.29
KTN1-221ENST00000555498 TRAK1Q9UPV9 953 aa29.34■■■□□ 2.29
KTN1-221ENST00000555498 SBNO1A3KN83 1393 aa29.34■■■□□ 2.29
KTN1-221ENST00000555498 ADGRB2O60241 1585 aa29.32■■■□□ 2.28
KTN1-221ENST00000555498 SLIT2O94813 1529 aa29.31■■■□□ 2.28
KTN1-221ENST00000555498 ARHGEF10O15013 1369 aa29.31■■■□□ 2.28
KTN1-221ENST00000555498 USP32Q8NFA0 1604 aa29.31■■■□□ 2.28
KTN1-221ENST00000555498 EIF3AQ14152 1382 aaKnown RBP29.3■■■□□ 2.28
KTN1-221ENST00000555498 LMOD2Q6P5Q4 547 aa29.28■■■□□ 2.28
KTN1-221ENST00000555498 PMFBP1Q8TBY8 1022 aa29.28■■■□□ 2.28
KTN1-221ENST00000555498 CCDC125Q86Z20 511 aa29.27■■■□□ 2.28
KTN1-221ENST00000555498 HIRIP3Q9BW71 556 aaPredicted RBP29.26■■■□□ 2.27
KTN1-221ENST00000555498 MINK1Q8N4C8 1332 aaPredicted RBP29.25■■■□□ 2.27
KTN1-221ENST00000555498 CABLES1Q8TDN4 633 aa29.25■■■□□ 2.27
KTN1-221ENST00000555498 RALGAPBQ86X10 1494 aa29.23■■■□□ 2.27
KTN1-221ENST00000555498 GPRASP1Q5JY77 1395 aa29.23■■■□□ 2.27
KTN1-221ENST00000555498 WASLO00401 505 aaPredicted RBP29.22■■■□□ 2.27
KTN1-221ENST00000555498 TULP4Q9NRJ4 1543 aa29.21■■■□□ 2.27
KTN1-221ENST00000555498 NWD2Q9ULI1 1742 aa29.21■■■□□ 2.27
KTN1-221ENST00000555498 PLEKHG5O94827 1062 aa29.21■■■□□ 2.27
KTN1-221ENST00000555498 GLI3P10071 1580 aa29.21■■■□□ 2.27
KTN1-221ENST00000555498 VPS72Q15906 364 aa29.2■■■□□ 2.26
KTN1-221ENST00000555498 ABCA3Q99758 1704 aa29.19■■■□□ 2.26
KTN1-221ENST00000555498 PLCH1Q4KWH8 1693 aa29.18■■■□□ 2.26
KTN1-221ENST00000555498 PRR36Q9H6K5 1346 aa29.18■■■□□ 2.26
KTN1-221ENST00000555498 TRPM3Q9HCF6 1732 aaPredicted RBP29.17■■■□□ 2.26
KTN1-221ENST00000555498 NGDNQ8NEJ9 315 aaKnown RBP29.15■■■□□ 2.26
KTN1-221ENST00000555498 FAM83GA6ND36 823 aa29.14■■■□□ 2.26
KTN1-221ENST00000555498 CCDC9Q9Y3X0 531 aaKnown RBP29.14■■■□□ 2.26
KTN1-221ENST00000555498 ARHGEF28Q8N1W1 1705 aaKnown RBP29.14■■■□□ 2.25
KTN1-221ENST00000555498 ALS2Q96Q42 1657 aa29.13■■■□□ 2.25
KTN1-221ENST00000555498 ONECUT3O60422 494 aaPredicted RBP29.12■■■□□ 2.25
KTN1-221ENST00000555498 SEPT12Q8IYM1 358 aa29.12■■■□□ 2.25
KTN1-221ENST00000555498 ZRANB1Q9UGI0 708 aa29.11■■■□□ 2.25
KTN1-221ENST00000555498 BRWD3Q6RI45 1802 aa29.1■■■□□ 2.25
KTN1-221ENST00000555498 ITSN1Q15811 1721 aa29.1■■■□□ 2.25
KTN1-221ENST00000555498 EP400Q96L91 3159 aa29.09■■■□□ 2.25
KTN1-221ENST00000555498 NUDT16Q96DE0 195 aaKnown RBP29.09■■■□□ 2.25
KTN1-221ENST00000555498 PAK3O75914 559 aaPredicted RBP29.08■■■□□ 2.25
KTN1-221ENST00000555498 BLMP54132 1417 aaPredicted RBP29.08■■■□□ 2.25
KTN1-221ENST00000555498 KIAA1210Q9ULL0 1709 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms