RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 STAC3Q96MF2 364 aa19.87■□□□□ 0.77
SNX6-203ENST00000555416 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
SNX6-203ENST00000555416 L3MBTL2Q969R5 705 aa19.86■□□□□ 0.77
SNX6-203ENST00000555416 SIRT1Q96EB6 747 aa19.86■□□□□ 0.77
SNX6-203ENST00000555416 PRAM1Q96QH2 718 aa19.86■□□□□ 0.77
SNX6-203ENST00000555416 ORAI2Q96SN7 254 aa19.86■□□□□ 0.77
SNX6-203ENST00000555416 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
SNX6-203ENST00000555416 SAFB2Q14151 953 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNX6-203ENST00000555416 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
SNX6-203ENST00000555416 DLC1Q96QB1 1528 aa19.83■□□□□ 0.77
SNX6-203ENST00000555416 NUTM2FA1L443 756 aa19.83■□□□□ 0.77
SNX6-203ENST00000555416 ILDR2Q71H61 639 aa19.83■□□□□ 0.77
SNX6-203ENST00000555416 NHSL1Q5SYE7 1610 aa19.83■□□□□ 0.76
SNX6-203ENST00000555416 NBPF1Q3BBV0 1214 aa19.82■□□□□ 0.76
SNX6-203ENST00000555416 JCADQ9P266 1359 aa19.8■□□□□ 0.76
SNX6-203ENST00000555416 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
SNX6-203ENST00000555416 POGKQ9P215 609 aa19.78■□□□□ 0.76
SNX6-203ENST00000555416 KIAA1210Q9ULL0 1709 aa19.77■□□□□ 0.76
SNX6-203ENST00000555416 ESCO1Q5FWF5 840 aa19.77■□□□□ 0.76
SNX6-203ENST00000555416 HIRIP3Q9BW71 556 aaPredicted RBP19.76■□□□□ 0.75
SNX6-203ENST00000555416 ARHGEF28Q8N1W1 1705 aaKnown RBP19.76■□□□□ 0.75
SNX6-203ENST00000555416 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
SNX6-203ENST00000555416 LRP6O75581 1613 aa19.74■□□□□ 0.75
SNX6-203ENST00000555416 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
SNX6-203ENST00000555416 RGS17Q9UGC6 210 aaPredicted RBP19.74■□□□□ 0.75
SNX6-203ENST00000555416 SHPRHQ149N8 1683 aa19.74■□□□□ 0.75
SNX6-203ENST00000555416 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
SNX6-203ENST00000555416 RGPD8O14715 1765 aaPredicted RBP19.73■□□□□ 0.75
SNX6-203ENST00000555416 SOS2Q07890 1332 aaPredicted RBP19.73■□□□□ 0.75
SNX6-203ENST00000555416 FOXO3O43524 673 aa19.72■□□□□ 0.75
SNX6-203ENST00000555416 XPCQ01831 940 aaPredicted RBP19.72■□□□□ 0.75
SNX6-203ENST00000555416 NBPF8Q3BBV2 869 aa19.72■□□□□ 0.75
SNX6-203ENST00000555416 USP32Q8NFA0 1604 aa19.72■□□□□ 0.75
SNX6-203ENST00000555416 TRPM1Q7Z4N2 1603 aa19.7■□□□□ 0.74
SNX6-203ENST00000555416 LRRC59Q96AG4 307 aaKnown RBP19.7■□□□□ 0.74
SNX6-203ENST00000555416 PRR36Q9H6K5 1346 aa19.7■□□□□ 0.74
SNX6-203ENST00000555416 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
SNX6-203ENST00000555416 PXDNQ92626 1479 aa19.69■□□□□ 0.74
SNX6-203ENST00000555416 SPATA31A6Q5VVP1 1343 aa19.69■□□□□ 0.74
SNX6-203ENST00000555416 NUTM2BA6NNL0 878 aaPredicted RBP19.67■□□□□ 0.74
SNX6-203ENST00000555416 NUTM2EB1AL46 878 aaPredicted RBP19.67■□□□□ 0.74
SNX6-203ENST00000555416 WASLO00401 505 aaPredicted RBP19.67■□□□□ 0.74
SNX6-203ENST00000555416 NUTM2AQ8IVF1 878 aaPredicted RBP19.67■□□□□ 0.74
SNX6-203ENST00000555416 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
SNX6-203ENST00000555416 PHF8Q9UPP1 1060 aa19.66■□□□□ 0.74
SNX6-203ENST00000555416 ANKARQ7Z5J8 1434 aa19.65■□□□□ 0.74
SNX6-203ENST00000555416 TONSLQ96HA7 1378 aa19.64■□□□□ 0.73
SNX6-203ENST00000555416 TULP4Q9NRJ4 1543 aa19.64■□□□□ 0.73
SNX6-203ENST00000555416 KIF1AQ12756 1690 aa19.64■□□□□ 0.73
SNX6-203ENST00000555416 PMFBP1Q8TBY8 1022 aa19.63■□□□□ 0.73
SNX6-203ENST00000555416 ROCK2O75116 1388 aaKnown RBP19.62■□□□□ 0.73
SNX6-203ENST00000555416 POTEAQ6S8J7 498 aa19.62■□□□□ 0.73
SNX6-203ENST00000555416 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
SNX6-203ENST00000555416 CDK19Q9BWU1 502 aa19.61■□□□□ 0.73
SNX6-203ENST00000555416 CENPJQ9HC77 1338 aaPredicted RBP19.6■□□□□ 0.73
SNX6-203ENST00000555416 ATP7BP35670 1465 aa19.6■□□□□ 0.73
SNX6-203ENST00000555416 MEX3CQ5U5Q3 659 aaKnown RBP19.59■□□□□ 0.73
SNX6-203ENST00000555416 QRICH2Q9H0J4 1663 aa19.59■□□□□ 0.73
SNX6-203ENST00000555416 GPRASP1Q5JY77 1395 aa19.58■□□□□ 0.73
SNX6-203ENST00000555416 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.73
SNX6-203ENST00000555416 SPATA31A3Q5VYP0 1347 aa19.58■□□□□ 0.73
SNX6-203ENST00000555416 NUDT16Q96DE0 195 aaKnown RBP19.58■□□□□ 0.72
SNX6-203ENST00000555416 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
SNX6-203ENST00000555416 ADAMTS2O95450 1211 aa19.56■□□□□ 0.72
SNX6-203ENST00000555416 RALGAPBQ86X10 1494 aa19.55■□□□□ 0.72
SNX6-203ENST00000555416 PSME1Q06323 249 aa19.54■□□□□ 0.72
SNX6-203ENST00000555416 TOPAZ1Q8N9V7 1692 aa19.53■□□□□ 0.72
SNX6-203ENST00000555416 TNS3Q68CZ2 1445 aa19.53■□□□□ 0.72
SNX6-203ENST00000555416 C8orf37Q96NL8 207 aa19.53■□□□□ 0.72
SNX6-203ENST00000555416 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
SNX6-203ENST00000555416 TRPM3Q9HCF6 1732 aaPredicted RBP19.53■□□□□ 0.72
SNX6-203ENST00000555416 AFF2P51816 1311 aa19.52■□□□□ 0.72
SNX6-203ENST00000555416 CARD11Q9BXL7 1154 aa19.52■□□□□ 0.72
SNX6-203ENST00000555416 SBNO1A3KN83 1393 aa19.52■□□□□ 0.72
SNX6-203ENST00000555416 SOCS7O14512 581 aa19.51■□□□□ 0.71
SNX6-203ENST00000555416 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
SNX6-203ENST00000555416 CABLES1Q8TDN4 633 aa19.51■□□□□ 0.71
SNX6-203ENST00000555416 ITSN1Q15811 1721 aa19.51■□□□□ 0.71
SNX6-203ENST00000555416 PLEKHG5O94827 1062 aa19.5■□□□□ 0.71
SNX6-203ENST00000555416 SRPK2P78362 688 aaKnown RBP19.5■□□□□ 0.71
SNX6-203ENST00000555416 CCDC61Q9Y6R9 512 aa19.5■□□□□ 0.71
SNX6-203ENST00000555416 LMOD2Q6P5Q4 547 aa19.49■□□□□ 0.71
SNX6-203ENST00000555416 ACEP12821 1306 aa19.48■□□□□ 0.71
SNX6-203ENST00000555416 POLR3AO14802 1390 aaPredicted RBP19.47■□□□□ 0.71
SNX6-203ENST00000555416 ALS2Q96Q42 1657 aa19.47■□□□□ 0.71
SNX6-203ENST00000555416 PLEKHG3A1L390 1219 aa19.47■□□□□ 0.71
SNX6-203ENST00000555416 ZNF772Q68DY9 489 aaPredicted RBP19.47■□□□□ 0.71
SNX6-203ENST00000555416 NGLY1Q96IV0 654 aa19.47■□□□□ 0.71
SNX6-203ENST00000555416 CLSPNQ9HAW4 1339 aa19.47■□□□□ 0.71
SNX6-203ENST00000555416 PPIP5K1Q6PFW1 1433 aa19.46■□□□□ 0.71
SNX6-203ENST00000555416 EVC2Q86UK5 1308 aa19.45■□□□□ 0.7
SNX6-203ENST00000555416 ABCA3Q99758 1704 aa19.45■□□□□ 0.7
SNX6-203ENST00000555416 MARF1Q9Y4F3 1742 aaKnown RBP19.45■□□□□ 0.7
SNX6-203ENST00000555416 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
SNX6-203ENST00000555416 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
SNX6-203ENST00000555416 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
SNX6-203ENST00000555416 FNBP4Q8N3X1 1017 aaPredicted RBP19.43■□□□□ 0.7
SNX6-203ENST00000555416 CABP1Q9NZU7 370 aa19.43■□□□□ 0.7
SNX6-203ENST00000555416 QTRT2Q9H974 415 aaKnown RBP19.41■□□□□ 0.7
SNX6-203ENST00000555416 SBNO2Q9Y2G9 1366 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms