RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 CENPBP07199 599 aaPredicted RBP32.82■■■□□ 2.84
RCCD1-203ENST00000555155 WAPLQ7Z5K2 1190 aa32.82■■■□□ 2.84
RCCD1-203ENST00000555155 DLC1Q96QB1 1528 aa32.82■■■□□ 2.84
RCCD1-203ENST00000555155 TECPR2O15040 1411 aa32.81■■■□□ 2.84
RCCD1-203ENST00000555155 MINK1Q8N4C8 1332 aaPredicted RBP32.8■■■□□ 2.84
RCCD1-203ENST00000555155 PLEKHH1Q9ULM0 1364 aa32.8■■■□□ 2.84
RCCD1-203ENST00000555155 KNDC1Q76NI1 1749 aa32.8■■■□□ 2.84
RCCD1-203ENST00000555155 PIK3R4Q99570 1358 aa32.79■■■□□ 2.84
RCCD1-203ENST00000555155 ROBO2Q9HCK4 1378 aa32.79■■■□□ 2.84
RCCD1-203ENST00000555155 EVC2Q86UK5 1308 aa32.78■■■□□ 2.84
RCCD1-203ENST00000555155 CPS1P31327 1500 aa32.77■■■□□ 2.84
RCCD1-203ENST00000555155 CC2D1BQ5T0F9 858 aaKnown RBP32.76■■■□□ 2.84
RCCD1-203ENST00000555155 KCNA6P17658 529 aa32.75■■■□□ 2.83
RCCD1-203ENST00000555155 KTN1Q86UP2 1357 aaKnown RBP32.74■■■□□ 2.83
RCCD1-203ENST00000555155 MRS2Q9HD23 443 aa32.74■■■□□ 2.83
RCCD1-203ENST00000555155 CABP2Q9NPB3 220 aa32.74■■■□□ 2.83
RCCD1-203ENST00000555155 XRN1Q8IZH2 1706 aaKnown RBP32.74■■■□□ 2.83
RCCD1-203ENST00000555155 TMC1Q8TDI8 760 aa32.74■■■□□ 2.83
RCCD1-203ENST00000555155 SIRT1Q96EB6 747 aa32.73■■■□□ 2.83
RCCD1-203ENST00000555155 FAM135BQ49AJ0 1406 aa32.73■■■□□ 2.83
RCCD1-203ENST00000555155 CHD2O14647 1828 aaKnown RBP32.72■■■□□ 2.83
RCCD1-203ENST00000555155 KNSTRNQ9Y448 316 aa32.7■■■□□ 2.83
RCCD1-203ENST00000555155 PTCH1Q13635 1447 aa32.69■■■□□ 2.82
RCCD1-203ENST00000555155 SLC12A5Q9H2X9 1139 aa32.69■■■□□ 2.82
RCCD1-203ENST00000555155 SRPK2P78362 688 aaKnown RBP32.68■■■□□ 2.82
RCCD1-203ENST00000555155 RALBP1Q15311 655 aa32.68■■■□□ 2.82
RCCD1-203ENST00000555155 PARD3Q8TEW0 1356 aa32.67■■■□□ 2.82
RCCD1-203ENST00000555155 MYBBP1AQ9BQG0 1328 aaKnown RBP32.64■■■□□ 2.82
RCCD1-203ENST00000555155 CARD14Q9BXL6 1004 aa32.63■■■□□ 2.81
RCCD1-203ENST00000555155 FAM9BQ8IZU0 186 aa32.62■■■□□ 2.81
RCCD1-203ENST00000555155 NWD1Q149M9 1564 aa32.62■■■□□ 2.81
RCCD1-203ENST00000555155 AMER1Q5JTC6 1135 aaPredicted RBP32.61■■■□□ 2.81
RCCD1-203ENST00000555155 AEBP2Q6ZN18 517 aaPredicted RBP32.61■■■□□ 2.81
RCCD1-203ENST00000555155 CDK19Q9BWU1 502 aa32.61■■■□□ 2.81
RCCD1-203ENST00000555155 RBM33Q96EV2 1170 aaKnown RBP32.6■■■□□ 2.81
RCCD1-203ENST00000555155 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.6■■■□□ 2.81
RCCD1-203ENST00000555155 PUS7Q96PZ0 661 aaKnown RBP32.59■■■□□ 2.81
RCCD1-203ENST00000555155 STRCP1A6NGW2 1772 aa32.56■■■□□ 2.8
RCCD1-203ENST00000555155 NSD3Q9BZ95 1437 aa32.56■■■□□ 2.8
RCCD1-203ENST00000555155 DMRT2Q9Y5R5 561 aa32.54■■■□□ 2.8
RCCD1-203ENST00000555155 ATAD2Q6PL18 1390 aa32.52■■■□□ 2.8
RCCD1-203ENST00000555155 ZNF335Q9H4Z2 1342 aaPredicted RBP32.51■■■□□ 2.8
RCCD1-203ENST00000555155 WASLO00401 505 aaPredicted RBP32.51■■■□□ 2.79
RCCD1-203ENST00000555155 NKTRP30414 1462 aaKnown RBP32.51■■■□□ 2.79
RCCD1-203ENST00000555155 BRD4O60885 1362 aaPredicted RBP32.5■■■□□ 2.79
RCCD1-203ENST00000555155 NLRP13Q86W25 1043 aa32.5■■■□□ 2.79
RCCD1-203ENST00000555155 PROSER2Q86WR7 435 aaPredicted RBP32.5■■■□□ 2.79
RCCD1-203ENST00000555155 ANKRD36BQ8N2N9 1353 aa32.49■■■□□ 2.79
RCCD1-203ENST00000555155 ADGRB2O60241 1585 aa32.48■■■□□ 2.79
RCCD1-203ENST00000555155 HNRNPUQ00839 825 aaKnown RBP eCLIP32.47■■■□□ 2.79
RCCD1-203ENST00000555155 NPC1L1Q9UHC9 1359 aa32.46■■■□□ 2.79
RCCD1-203ENST00000555155 A0A1W2PP64 1363 aa32.45■■■□□ 2.79
RCCD1-203ENST00000555155 NINLQ9Y2I6 1382 aa32.45■■■□□ 2.78
RCCD1-203ENST00000555155 NALCNQ8IZF0 1738 aa32.44■■■□□ 2.78
RCCD1-203ENST00000555155 CABP1Q9NZU7 370 aa32.44■■■□□ 2.78
RCCD1-203ENST00000555155 CD163L1Q9NR16 1453 aa32.42■■■□□ 2.78
RCCD1-203ENST00000555155 PPP2R1AP30153 589 aa32.42■■■□□ 2.78
RCCD1-203ENST00000555155 PNISRQ8TF01 805 aaKnown RBP32.42■■■□□ 2.78
RCCD1-203ENST00000555155 TMEM94Q12767 1356 aa32.41■■■□□ 2.78
RCCD1-203ENST00000555155 NUTM2FA1L443 756 aa32.41■■■□□ 2.78
RCCD1-203ENST00000555155 ADGRL3Q9HAR2 1447 aa32.4■■■□□ 2.78
RCCD1-203ENST00000555155 C14orf37Q86TY3 774 aa32.4■■■□□ 2.78
RCCD1-203ENST00000555155 USP32Q8NFA0 1604 aa32.4■■■□□ 2.78
RCCD1-203ENST00000555155 PRR36Q9H6K5 1346 aa32.38■■■□□ 2.77
RCCD1-203ENST00000555155 TERF2IPQ9NYB0 399 aa32.37■■■□□ 2.77
RCCD1-203ENST00000555155 NUDT16Q96DE0 195 aaKnown RBP32.37■■■□□ 2.77
RCCD1-203ENST00000555155 CGNL1Q0VF96 1302 aa32.36■■■□□ 2.77
RCCD1-203ENST00000555155 PPIP5K1Q6PFW1 1433 aa32.36■■■□□ 2.77
RCCD1-203ENST00000555155 ATP7BP35670 1465 aa32.35■■■□□ 2.77
RCCD1-203ENST00000555155 HDGFL2Q7Z4V5 671 aaPredicted RBP32.34■■■□□ 2.77
RCCD1-203ENST00000555155 LRRC7Q96NW7 1537 aa32.34■■■□□ 2.77
RCCD1-203ENST00000555155 CDC42BPGQ6DT37 1551 aa32.34■■■□□ 2.77
RCCD1-203ENST00000555155 TNNT2P45379 298 aaPredicted RBP32.33■■■□□ 2.77
RCCD1-203ENST00000555155 MORC1Q86VD1 984 aa32.32■■■□□ 2.76
RCCD1-203ENST00000555155 SENP3-EIF4A1A0A087X0R7 540 aa32.31■■■□□ 2.76
RCCD1-203ENST00000555155 CCDC61Q9Y6R9 512 aa32.3■■■□□ 2.76
RCCD1-203ENST00000555155 C19orf44Q9H6X5 657 aa32.29■■■□□ 2.76
RCCD1-203ENST00000555155 NCOA3Q9Y6Q9 1424 aa32.29■■■□□ 2.76
RCCD1-203ENST00000555155 FMN2Q9NZ56 1722 aa32.29■■■□□ 2.76
RCCD1-203ENST00000555155 XIRP1Q702N8 1843 aaKnown RBP32.29■■■□□ 2.76
RCCD1-203ENST00000555155 GGNBP2Q9H3C7 697 aa32.25■■■□□ 2.75
RCCD1-203ENST00000555155 TOPAZ1Q8N9V7 1692 aa32.23■■■□□ 2.75
RCCD1-203ENST00000555155 KIF20BQ96Q89 1820 aa32.23■■■□□ 2.75
RCCD1-203ENST00000555155 ANKARQ7Z5J8 1434 aa32.23■■■□□ 2.75
RCCD1-203ENST00000555155 RGPD8O14715 1765 aaPredicted RBP32.23■■■□□ 2.75
RCCD1-203ENST00000555155 NSD2O96028 1365 aa32.23■■■□□ 2.75
RCCD1-203ENST00000555155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.23■■■□□ 2.75
RCCD1-203ENST00000555155 ITSN1Q15811 1721 aa32.22■■■□□ 2.75
RCCD1-203ENST00000555155 CPSF1Q10570 1443 aaKnown RBP32.2■■■□□ 2.75
RCCD1-203ENST00000555155 MSH6P52701 1360 aa32.2■■■□□ 2.75
RCCD1-203ENST00000555155 LTBP4Q8N2S1 1624 aa32.2■■■□□ 2.75
RCCD1-203ENST00000555155 FYB1O15117 783 aa32.2■■■□□ 2.74
RCCD1-203ENST00000555155 ANKRD26Q9UPS8 1709 aa32.19■■■□□ 2.74
RCCD1-203ENST00000555155 ATF3P18847 181 aa32.18■■■□□ 2.74
RCCD1-203ENST00000555155 PMFBP1Q8TBY8 1022 aa32.18■■■□□ 2.74
RCCD1-203ENST00000555155 AKAP12Q02952 1782 aa32.18■■■□□ 2.74
RCCD1-203ENST00000555155 SCAF1Q9H7N4 1312 aaKnown RBP32.18■■■□□ 2.74
RCCD1-203ENST00000555155 DCCP43146 1447 aa32.17■■■□□ 2.74
RCCD1-203ENST00000555155 MON2Q7Z3U7 1717 aa32.17■■■□□ 2.74
RCCD1-203ENST00000555155 PLEKHG3A1L390 1219 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms