RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
PRKCH-211ENST00000555082 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
PRKCH-211ENST00000555082 KDM4FA0A1W2PPD8 638 aa13.27□□□□□ -0.29
PRKCH-211ENST00000555082 CC2D1BQ5T0F9 858 aaKnown RBP13.27□□□□□ -0.29
PRKCH-211ENST00000555082 ZBED9Q6R2W3 1325 aa13.27□□□□□ -0.29
PRKCH-211ENST00000555082 PER1O15534 1290 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-211ENST00000555082 SLC12A5Q9H2X9 1139 aa13.26□□□□□ -0.29
PRKCH-211ENST00000555082 CEP170BQ9Y4F5 1589 aaPredicted RBP13.26□□□□□ -0.29
PRKCH-211ENST00000555082 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
PRKCH-211ENST00000555082 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
PRKCH-211ENST00000555082 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
PRKCH-211ENST00000555082 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
PRKCH-211ENST00000555082 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
PRKCH-211ENST00000555082 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
PRKCH-211ENST00000555082 ARHGEF28Q8N1W1 1705 aaKnown RBP13.24□□□□□ -0.29
PRKCH-211ENST00000555082 HSPA2P54652 639 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
PRKCH-211ENST00000555082 SLIT1O75093 1534 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 PTPRUQ92729 1446 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 CARD14Q9BXL6 1004 aa13.23□□□□□ -0.29
PRKCH-211ENST00000555082 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
PRKCH-211ENST00000555082 ABCC11Q96J66 1382 aa13.22□□□□□ -0.29
PRKCH-211ENST00000555082 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
PRKCH-211ENST00000555082 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
PRKCH-211ENST00000555082 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
PRKCH-211ENST00000555082 NUTM2FA1L443 756 aa13.22□□□□□ -0.29
PRKCH-211ENST00000555082 ANP32AP39687 249 aaKnown RBP13.22□□□□□ -0.29
PRKCH-211ENST00000555082 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
PRKCH-211ENST00000555082 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.3
PRKCH-211ENST00000555082 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-211ENST00000555082 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-211ENST00000555082 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-211ENST00000555082 KNSTRNQ9Y448 316 aa13.2□□□□□ -0.3
PRKCH-211ENST00000555082 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
PRKCH-211ENST00000555082 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
PRKCH-211ENST00000555082 KCNA6P17658 529 aa13.19□□□□□ -0.3
PRKCH-211ENST00000555082 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
PRKCH-211ENST00000555082 MED14O60244 1454 aa13.18□□□□□ -0.3
PRKCH-211ENST00000555082 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
PRKCH-211ENST00000555082 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-211ENST00000555082 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
PRKCH-211ENST00000555082 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-211ENST00000555082 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
PRKCH-211ENST00000555082 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
PRKCH-211ENST00000555082 MYOM1P52179 1685 aa13.16□□□□□ -0.3
PRKCH-211ENST00000555082 KTN1Q86UP2 1357 aaKnown RBP13.16□□□□□ -0.3
PRKCH-211ENST00000555082 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-211ENST00000555082 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
PRKCH-211ENST00000555082 SALL2Q9Y467 1007 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-211ENST00000555082 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
PRKCH-211ENST00000555082 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
PRKCH-211ENST00000555082 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
PRKCH-211ENST00000555082 TECPR2O15040 1411 aa13.14□□□□□ -0.31
PRKCH-211ENST00000555082 NSD3Q9BZ95 1437 aa13.14□□□□□ -0.31
PRKCH-211ENST00000555082 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
PRKCH-211ENST00000555082 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-211ENST00000555082 RALBP1Q15311 655 aa13.12□□□□□ -0.31
PRKCH-211ENST00000555082 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
PRKCH-211ENST00000555082 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
PRKCH-211ENST00000555082 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
PRKCH-211ENST00000555082 NPHP4O75161 1426 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-211ENST00000555082 FAM135BQ49AJ0 1406 aa13.12□□□□□ -0.31
PRKCH-211ENST00000555082 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
PRKCH-211ENST00000555082 NUDT16Q96DE0 195 aaKnown RBP13.12□□□□□ -0.31
PRKCH-211ENST00000555082 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
PRKCH-211ENST00000555082 CPS1P31327 1500 aa13.1□□□□□ -0.31
PRKCH-211ENST00000555082 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
PRKCH-211ENST00000555082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKCH-211ENST00000555082 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
PRKCH-211ENST00000555082 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
PRKCH-211ENST00000555082 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
PRKCH-211ENST00000555082 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.09□□□□□ -0.31
PRKCH-211ENST00000555082 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
PRKCH-211ENST00000555082 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
PRKCH-211ENST00000555082 NLRP13Q86W25 1043 aa13.08□□□□□ -0.32
PRKCH-211ENST00000555082 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
PRKCH-211ENST00000555082 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
PRKCH-211ENST00000555082 FBLN1P23142 703 aa13.07□□□□□ -0.32
PRKCH-211ENST00000555082 PPIP5K1Q6PFW1 1433 aa13.07□□□□□ -0.32
PRKCH-211ENST00000555082 NEFMP07197 916 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 PNISRQ8TF01 805 aaKnown RBP13.06□□□□□ -0.32
PRKCH-211ENST00000555082 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 MORC1Q86VD1 984 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 KNDC1Q76NI1 1749 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 HDGFL2Q7Z4V5 671 aaPredicted RBP13.06□□□□□ -0.32
PRKCH-211ENST00000555082 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
PRKCH-211ENST00000555082 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
PRKCH-211ENST00000555082 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
PRKCH-211ENST00000555082 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
PRKCH-211ENST00000555082 FYB1O15117 783 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms