RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 SAFB2Q14151 953 aaKnown RBP eCLIP18.54■□□□□ 0.56
MTHFD1-208ENST00000554739 NBPF8Q3BBV2 869 aa18.54■□□□□ 0.56
MTHFD1-208ENST00000554739 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
MTHFD1-208ENST00000554739 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
MTHFD1-208ENST00000554739 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
MTHFD1-208ENST00000554739 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.55
MTHFD1-208ENST00000554739 ROBO1Q9Y6N7 1651 aa18.51■□□□□ 0.55
MTHFD1-208ENST00000554739 KIAA1210Q9ULL0 1709 aa18.5■□□□□ 0.55
MTHFD1-208ENST00000554739 ORAI2Q96SN7 254 aa18.5■□□□□ 0.55
MTHFD1-208ENST00000554739 CCER1Q8TC90 406 aaPredicted RBP18.49■□□□□ 0.55
MTHFD1-208ENST00000554739 CDC42BPGQ6DT37 1551 aa18.48■□□□□ 0.55
MTHFD1-208ENST00000554739 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
MTHFD1-208ENST00000554739 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
MTHFD1-208ENST00000554739 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
MTHFD1-208ENST00000554739 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
MTHFD1-208ENST00000554739 ESCO1Q5FWF5 840 aa18.46■□□□□ 0.55
MTHFD1-208ENST00000554739 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
MTHFD1-208ENST00000554739 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
MTHFD1-208ENST00000554739 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
MTHFD1-208ENST00000554739 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
MTHFD1-208ENST00000554739 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
MTHFD1-208ENST00000554739 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
MTHFD1-208ENST00000554739 CENPJQ9HC77 1338 aaPredicted RBP18.41■□□□□ 0.54
MTHFD1-208ENST00000554739 CARD11Q9BXL7 1154 aa18.4■□□□□ 0.54
MTHFD1-208ENST00000554739 FOXO3O43524 673 aa18.39■□□□□ 0.53
MTHFD1-208ENST00000554739 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
MTHFD1-208ENST00000554739 ARHGEF28Q8N1W1 1705 aaKnown RBP18.39■□□□□ 0.53
MTHFD1-208ENST00000554739 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
MTHFD1-208ENST00000554739 ADGRB2O60241 1585 aa18.38■□□□□ 0.53
MTHFD1-208ENST00000554739 LRRC59Q96AG4 307 aaKnown RBP18.38■□□□□ 0.53
MTHFD1-208ENST00000554739 PHF8Q9UPP1 1060 aa18.38■□□□□ 0.53
MTHFD1-208ENST00000554739 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
MTHFD1-208ENST00000554739 JCADQ9P266 1359 aa18.38■□□□□ 0.53
MTHFD1-208ENST00000554739 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
MTHFD1-208ENST00000554739 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
MTHFD1-208ENST00000554739 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
MTHFD1-208ENST00000554739 FMN2Q9NZ56 1722 aa18.37■□□□□ 0.53
MTHFD1-208ENST00000554739 ANKARQ7Z5J8 1434 aa18.37■□□□□ 0.53
MTHFD1-208ENST00000554739 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
MTHFD1-208ENST00000554739 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
MTHFD1-208ENST00000554739 NUDT16Q96DE0 195 aaKnown RBP18.35■□□□□ 0.53
MTHFD1-208ENST00000554739 NHSL1Q5SYE7 1610 aa18.34■□□□□ 0.53
MTHFD1-208ENST00000554739 XPCQ01831 940 aaPredicted RBP18.33■□□□□ 0.52
MTHFD1-208ENST00000554739 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.52
MTHFD1-208ENST00000554739 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
MTHFD1-208ENST00000554739 TULP4Q9NRJ4 1543 aa18.32■□□□□ 0.52
MTHFD1-208ENST00000554739 USP32Q8NFA0 1604 aa18.31■□□□□ 0.52
MTHFD1-208ENST00000554739 SPATA31A6Q5VVP1 1343 aa18.31■□□□□ 0.52
MTHFD1-208ENST00000554739 CABP2Q9NPB3 220 aa18.31■□□□□ 0.52
MTHFD1-208ENST00000554739 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
MTHFD1-208ENST00000554739 PXDNQ92626 1479 aa18.31■□□□□ 0.52
MTHFD1-208ENST00000554739 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
MTHFD1-208ENST00000554739 SRPK2P78362 688 aaKnown RBP18.3■□□□□ 0.52
MTHFD1-208ENST00000554739 PSME1Q06323 249 aa18.3■□□□□ 0.52
MTHFD1-208ENST00000554739 ATP7BP35670 1465 aa18.29■□□□□ 0.52
MTHFD1-208ENST00000554739 PNPLA6Q8IY17 1366 aa18.29■□□□□ 0.52
MTHFD1-208ENST00000554739 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
MTHFD1-208ENST00000554739 MED1Q15648 1581 aaPredicted RBP18.27■□□□□ 0.52
MTHFD1-208ENST00000554739 PLEKHG3A1L390 1219 aa18.27■□□□□ 0.52
MTHFD1-208ENST00000554739 NGDNQ8NEJ9 315 aaKnown RBP18.27■□□□□ 0.52
MTHFD1-208ENST00000554739 SBNO2Q9Y2G9 1366 aa18.27■□□□□ 0.51
MTHFD1-208ENST00000554739 SPATA31A3Q5VYP0 1347 aa18.26■□□□□ 0.51
MTHFD1-208ENST00000554739 KIF1AQ12756 1690 aa18.26■□□□□ 0.51
MTHFD1-208ENST00000554739 ST20-MTHFSA0A0A6YYL1 179 aa18.26■□□□□ 0.51
MTHFD1-208ENST00000554739 RGPD8O14715 1765 aaPredicted RBP18.25■□□□□ 0.51
MTHFD1-208ENST00000554739 NUTM2BA6NNL0 878 aaPredicted RBP18.25■□□□□ 0.51
MTHFD1-208ENST00000554739 NUTM2EB1AL46 878 aaPredicted RBP18.25■□□□□ 0.51
MTHFD1-208ENST00000554739 NUTM2AQ8IVF1 878 aaPredicted RBP18.25■□□□□ 0.51
MTHFD1-208ENST00000554739 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
MTHFD1-208ENST00000554739 TESK2Q96S53 571 aa18.24■□□□□ 0.51
MTHFD1-208ENST00000554739 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
MTHFD1-208ENST00000554739 ACEP12821 1306 aa18.23■□□□□ 0.51
MTHFD1-208ENST00000554739 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
MTHFD1-208ENST00000554739 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
MTHFD1-208ENST00000554739 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
MTHFD1-208ENST00000554739 LRP6O75581 1613 aa18.23■□□□□ 0.51
MTHFD1-208ENST00000554739 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
MTHFD1-208ENST00000554739 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
MTHFD1-208ENST00000554739 USP47Q96K76 1375 aa18.21■□□□□ 0.51
MTHFD1-208ENST00000554739 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
MTHFD1-208ENST00000554739 SLC24A1O60721 1099 aa18.19■□□□□ 0.5
MTHFD1-208ENST00000554739 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
MTHFD1-208ENST00000554739 TNS3Q68CZ2 1445 aa18.19■□□□□ 0.5
MTHFD1-208ENST00000554739 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
MTHFD1-208ENST00000554739 PUS7Q96PZ0 661 aaKnown RBP18.18■□□□□ 0.5
MTHFD1-208ENST00000554739 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
MTHFD1-208ENST00000554739 ADAMTS2O95450 1211 aa18.17■□□□□ 0.5
MTHFD1-208ENST00000554739 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
MTHFD1-208ENST00000554739 TOPAZ1Q8N9V7 1692 aa18.16■□□□□ 0.5
MTHFD1-208ENST00000554739 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
MTHFD1-208ENST00000554739 CABLES1Q8TDN4 633 aa18.15■□□□□ 0.5
MTHFD1-208ENST00000554739 COL22A1Q8NFW1 1626 aaPredicted RBP18.15■□□□□ 0.5
MTHFD1-208ENST00000554739 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
MTHFD1-208ENST00000554739 ILDR2Q71H61 639 aa18.14■□□□□ 0.49
MTHFD1-208ENST00000554739 TMF1P82094 1093 aa18.13■□□□□ 0.49
MTHFD1-208ENST00000554739 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
MTHFD1-208ENST00000554739 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
MTHFD1-208ENST00000554739 PLEKHG5O94827 1062 aa18.12■□□□□ 0.49
MTHFD1-208ENST00000554739 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
MTHFD1-208ENST00000554739 NGLY1Q96IV0 654 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms