RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 ESCO1Q5FWF5 840 aa39.7■■■■□ 3.95
KTN1-215ENST00000554567 CCDC144AA2RUR9 1427 aa39.68■■■■□ 3.94
KTN1-215ENST00000554567 RGS12O14924 1447 aa39.68■■■■□ 3.94
KTN1-215ENST00000554567 USP21Q9UK80 565 aa39.65■■■■□ 3.94
KTN1-215ENST00000554567 WAPLQ7Z5K2 1190 aa39.64■■■■□ 3.94
KTN1-215ENST00000554567 MPHOSPH9Q99550 1183 aa39.64■■■■□ 3.94
KTN1-215ENST00000554567 NUTM2FA1L443 756 aa39.63■■■■□ 3.93
KTN1-215ENST00000554567 XPCQ01831 940 aaPredicted RBP39.61■■■■□ 3.93
KTN1-215ENST00000554567 NPHP3Q7Z494 1330 aa39.61■■■■□ 3.93
KTN1-215ENST00000554567 FOXO3O43524 673 aa39.6■■■■□ 3.93
KTN1-215ENST00000554567 TMEM132EQ6IEE7 984 aa39.6■■■■□ 3.93
KTN1-215ENST00000554567 CDC42BPGQ6DT37 1551 aa39.58■■■■□ 3.93
KTN1-215ENST00000554567 SPATA31E1Q6ZUB1 1445 aa39.57■■■■□ 3.93
KTN1-215ENST00000554567 ANKRD30BQ9BXX2 1392 aa39.57■■■■□ 3.92
KTN1-215ENST00000554567 TRPC5Q9UL62 973 aaPredicted RBP39.56■■■■□ 3.92
KTN1-215ENST00000554567 FNBP4Q8N3X1 1017 aaPredicted RBP39.54■■■■□ 3.92
KTN1-215ENST00000554567 LRPPRCP42704 1394 aaKnown RBP39.54■■■■□ 3.92
KTN1-215ENST00000554567 COL22A1Q8NFW1 1626 aaPredicted RBP39.51■■■■□ 3.91
KTN1-215ENST00000554567 PXDNQ92626 1479 aa39.5■■■■□ 3.91
KTN1-215ENST00000554567 PLEKHH1Q9ULM0 1364 aa39.5■■■■□ 3.91
KTN1-215ENST00000554567 TECPR2O15040 1411 aa39.49■■■■□ 3.91
KTN1-215ENST00000554567 IFT172Q9UG01 1749 aa39.48■■■■□ 3.91
KTN1-215ENST00000554567 ABCC11Q96J66 1382 aa39.48■■■■□ 3.91
KTN1-215ENST00000554567 MYOM2P54296 1465 aa39.47■■■■□ 3.91
KTN1-215ENST00000554567 PIK3C2GO75747 1445 aa39.44■■■■□ 3.9
KTN1-215ENST00000554567 ATRNO75882 1429 aa39.43■■■■□ 3.9
KTN1-215ENST00000554567 ATAD2Q6PL18 1390 aa39.43■■■■□ 3.9
KTN1-215ENST00000554567 YTHDC2Q9H6S0 1430 aaKnown RBP39.41■■■■□ 3.9
KTN1-215ENST00000554567 KNDC1Q76NI1 1749 aa39.39■■■■□ 3.9
KTN1-215ENST00000554567 BCL9LQ86UU0 1499 aa39.37■■■■□ 3.89
KTN1-215ENST00000554567 C14orf93Q9H972 538 aaKnown RBP39.35■■■■□ 3.89
KTN1-215ENST00000554567 FMN2Q9NZ56 1722 aa39.34■■■■□ 3.89
KTN1-215ENST00000554567 CFAP70Q5T0N1 1121 aa39.34■■■■□ 3.89
KTN1-215ENST00000554567 KRT28Q7Z3Y7 464 aa39.34■■■■□ 3.89
KTN1-215ENST00000554567 MARF1Q9Y4F3 1742 aaKnown RBP39.34■■■■□ 3.89
KTN1-215ENST00000554567 SPATA31A3Q5VYP0 1347 aa39.33■■■■□ 3.89
KTN1-215ENST00000554567 SIRT1Q96EB6 747 aa39.31■■■■□ 3.88
KTN1-215ENST00000554567 GJD4Q96KN9 370 aaPredicted RBP39.31■■■■□ 3.88
KTN1-215ENST00000554567 SAFB2Q14151 953 aaKnown RBP eCLIP39.3■■■■□ 3.88
KTN1-215ENST00000554567 DHX57Q6P158 1386 aaKnown RBP39.3■■■■□ 3.88
KTN1-215ENST00000554567 PLEKHG5O94827 1062 aa39.28■■■■□ 3.88
KTN1-215ENST00000554567 KIF1AQ12756 1690 aa39.27■■■■□ 3.88
KTN1-215ENST00000554567 ACIN1Q9UKV3 1341 aaKnown RBP39.26■■■■□ 3.88
KTN1-215ENST00000554567 PHF8Q9UPP1 1060 aa39.26■■■■□ 3.88
KTN1-215ENST00000554567 HAP1P54257 671 aaPredicted RBP39.25■■■■□ 3.87
KTN1-215ENST00000554567 PRAM1Q96QH2 718 aa39.25■■■■□ 3.87
KTN1-215ENST00000554567 UNC5CLQ8IV45 518 aa39.24■■■■□ 3.87
KTN1-215ENST00000554567 RGPD8O14715 1765 aaPredicted RBP39.23■■■■□ 3.87
KTN1-215ENST00000554567 PSME1Q06323 249 aa39.22■■■■□ 3.87
KTN1-215ENST00000554567 NRXN1Q9ULB1 1477 aa39.21■■■■□ 3.87
KTN1-215ENST00000554567 LMOD2Q6P5Q4 547 aa39.2■■■■□ 3.87
KTN1-215ENST00000554567 CABLES1Q8TDN4 633 aa39.2■■■■□ 3.87
KTN1-215ENST00000554567 POGKQ9P215 609 aa39.2■■■■□ 3.87
KTN1-215ENST00000554567 SLIT2O94813 1529 aa39.16■■■■□ 3.86
KTN1-215ENST00000554567 TNS3Q68CZ2 1445 aa39.15■■■■□ 3.86
KTN1-215ENST00000554567 RALGAPBQ86X10 1494 aa39.14■■■■□ 3.86
KTN1-215ENST00000554567 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.14■■■■□ 3.86
KTN1-215ENST00000554567 CCDC125Q86Z20 511 aa39.13■■■■□ 3.85
KTN1-215ENST00000554567 PMFBP1Q8TBY8 1022 aa39.13■■■■□ 3.85
KTN1-215ENST00000554567 USP32Q8NFA0 1604 aa39.13■■■■□ 3.85
KTN1-215ENST00000554567 RAB3GAP2Q9H2M9 1393 aa39.12■■■■□ 3.85
KTN1-215ENST00000554567 EP400Q96L91 3159 aa39.12■■■■□ 3.85
KTN1-215ENST00000554567 ZRANB1Q9UGI0 708 aa39.12■■■■□ 3.85
KTN1-215ENST00000554567 SRCAPQ6ZRS2 3230 aa39.12■■■■□ 3.85
KTN1-215ENST00000554567 GLI3P10071 1580 aa39.1■■■■□ 3.85
KTN1-215ENST00000554567 TRAK1Q9UPV9 953 aa39.09■■■■□ 3.85
KTN1-215ENST00000554567 KDM2AQ9Y2K7 1162 aa39.09■■■■□ 3.85
KTN1-215ENST00000554567 HIRIP3Q9BW71 556 aaPredicted RBP39.08■■■■□ 3.85
KTN1-215ENST00000554567 SBNO1A3KN83 1393 aa39.08■■■■□ 3.85
KTN1-215ENST00000554567 CCDC9Q9Y3X0 531 aaKnown RBP39.07■■■■□ 3.85
KTN1-215ENST00000554567 ARHGEF10O15013 1369 aa39.04■■■■□ 3.84
KTN1-215ENST00000554567 DLC1Q96QB1 1528 aa39.04■■■■□ 3.84
KTN1-215ENST00000554567 SEPT12Q8IYM1 358 aa39.03■■■■□ 3.84
KTN1-215ENST00000554567 VPS72Q15906 364 aa39.02■■■■□ 3.84
KTN1-215ENST00000554567 DCAF11Q8TEB1 546 aa39.02■■■■□ 3.84
KTN1-215ENST00000554567 MINK1Q8N4C8 1332 aaPredicted RBP39.02■■■■□ 3.84
KTN1-215ENST00000554567 ANKARQ7Z5J8 1434 aa39■■■■□ 3.83
KTN1-215ENST00000554567 FAM83GA6ND36 823 aa38.98■■■■□ 3.83
KTN1-215ENST00000554567 ADGRB1O14514 1584 aa38.98■■■■□ 3.83
KTN1-215ENST00000554567 BRWD3Q6RI45 1802 aa38.97■■■■□ 3.83
KTN1-215ENST00000554567 PLCH1Q4KWH8 1693 aa38.97■■■■□ 3.83
KTN1-215ENST00000554567 BLMP54132 1417 aaPredicted RBP38.95■■■■□ 3.83
KTN1-215ENST00000554567 ABCA3Q99758 1704 aa38.94■■■■□ 3.82
KTN1-215ENST00000554567 ADGRB2O60241 1585 aa38.93■■■■□ 3.82
KTN1-215ENST00000554567 NWD2Q9ULI1 1742 aa38.92■■■■□ 3.82
KTN1-215ENST00000554567 GPRASP1Q5JY77 1395 aa38.92■■■■□ 3.82
KTN1-215ENST00000554567 PRR36Q9H6K5 1346 aa38.91■■■■□ 3.82
KTN1-215ENST00000554567 A0A0G2JS52 829 aa38.91■■■■□ 3.82
KTN1-215ENST00000554567 MYT1Q01538 1121 aa38.91■■■■□ 3.82
KTN1-215ENST00000554567 SF3B2Q13435 895 aaKnown RBP38.91■■■■□ 3.82
KTN1-215ENST00000554567 DEFB132Q7Z7B7 95 aa38.91■■■■□ 3.82
KTN1-215ENST00000554567 WASLO00401 505 aaPredicted RBP38.89■■■■□ 3.82
KTN1-215ENST00000554567 ONECUT3O60422 494 aaPredicted RBP38.89■■■■□ 3.82
KTN1-215ENST00000554567 EIF3AQ14152 1382 aaKnown RBP38.88■■■■□ 3.81
KTN1-215ENST00000554567 KRT27Q7Z3Y8 459 aa38.88■■■■□ 3.81
KTN1-215ENST00000554567 NGDNQ8NEJ9 315 aaKnown RBP38.87■■■■□ 3.81
KTN1-215ENST00000554567 BTG4Q9NY30 223 aa38.87■■■■□ 3.81
KTN1-215ENST00000554567 TRPM3Q9HCF6 1732 aaPredicted RBP38.86■■■■□ 3.81
KTN1-215ENST00000554567 PAK3O75914 559 aaPredicted RBP38.85■■■■□ 3.81
KTN1-215ENST00000554567 TULP4Q9NRJ4 1543 aa38.84■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms