RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CLCN1P35523 988 aa10.41□□□□□ -0.74
SCFD1-212ENST00000554486 KCNC4Q03721 635 aa10.41□□□□□ -0.74
SCFD1-212ENST00000554486 AQRO60306 1485 aaKnown RBP eCLIP10.41□□□□□ -0.74
SCFD1-212ENST00000554486 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
SCFD1-212ENST00000554486 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
SCFD1-212ENST00000554486 GAPVD1Q14C86 1478 aa10.4□□□□□ -0.74
SCFD1-212ENST00000554486 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
SCFD1-212ENST00000554486 TMEM132AQ24JP5 1023 aa10.39□□□□□ -0.75
SCFD1-212ENST00000554486 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-212ENST00000554486 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
SCFD1-212ENST00000554486 DAXXQ9UER7 740 aaPredicted RBP10.38□□□□□ -0.75
SCFD1-212ENST00000554486 EEA1Q15075 1411 aa10.38□□□□□ -0.75
SCFD1-212ENST00000554486 SSTR3P32745 418 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-212ENST00000554486 KMT5BQ4FZB7 885 aa10.37□□□□□ -0.75
SCFD1-212ENST00000554486 FAM9AQ8IZU1 332 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-212ENST00000554486 PBRM1Q86U86 1689 aa10.37□□□□□ -0.75
SCFD1-212ENST00000554486 APLP1P51693 650 aa10.36□□□□□ -0.75
SCFD1-212ENST00000554486 IGF1RP08069 1367 aa10.36□□□□□ -0.75
SCFD1-212ENST00000554486 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
SCFD1-212ENST00000554486 ERICH3Q5RHP9 1530 aa10.35□□□□□ -0.75
SCFD1-212ENST00000554486 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
SCFD1-212ENST00000554486 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
SCFD1-212ENST00000554486 TJAP1Q5JTD0 557 aa10.33□□□□□ -0.76
SCFD1-212ENST00000554486 MTRQ99707 1265 aa10.33□□□□□ -0.76
SCFD1-212ENST00000554486 PCDHB3Q9Y5E6 796 aa10.32□□□□□ -0.76
SCFD1-212ENST00000554486 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
SCFD1-212ENST00000554486 CFHP08603 1231 aa10.31□□□□□ -0.76
SCFD1-212ENST00000554486 SLC10A3P09131 477 aa10.31□□□□□ -0.76
SCFD1-212ENST00000554486 RDH13Q8NBN7 331 aa10.31□□□□□ -0.76
SCFD1-212ENST00000554486 A0A0G2JS52 829 aa10.3□□□□□ -0.76
SCFD1-212ENST00000554486 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
SCFD1-212ENST00000554486 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
SCFD1-212ENST00000554486 CD46P15529 392 aa10.3□□□□□ -0.76
SCFD1-212ENST00000554486 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
SCFD1-212ENST00000554486 CUL7Q14999 1698 aa10.3□□□□□ -0.76
SCFD1-212ENST00000554486 ADAMTS12P58397 1594 aa10.3□□□□□ -0.76
SCFD1-212ENST00000554486 MAGI1Q96QZ7 1491 aaPredicted RBP10.3□□□□□ -0.76
SCFD1-212ENST00000554486 PRXQ9BXM0 1461 aa10.3□□□□□ -0.76
SCFD1-212ENST00000554486 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
SCFD1-212ENST00000554486 BEGAINQ9BUH8 593 aa10.29□□□□□ -0.76
SCFD1-212ENST00000554486 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
SCFD1-212ENST00000554486 RGS20O76081 388 aa10.28□□□□□ -0.76
SCFD1-212ENST00000554486 COPS2P61201 443 aa10.28□□□□□ -0.76
SCFD1-212ENST00000554486 KIF21BO75037 1637 aa10.27□□□□□ -0.77
SCFD1-212ENST00000554486 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
SCFD1-212ENST00000554486 RAPGEF2Q9Y4G8 1499 aa10.25□□□□□ -0.77
SCFD1-212ENST00000554486 ZNF516Q92618 1163 aa10.25□□□□□ -0.77
SCFD1-212ENST00000554486 ZPR1O75312 459 aa10.24□□□□□ -0.77
SCFD1-212ENST00000554486 NR1I2O75469 434 aa10.24□□□□□ -0.77
SCFD1-212ENST00000554486 CHD1O14646 1710 aa10.24□□□□□ -0.77
SCFD1-212ENST00000554486 BLOC1S3Q6QNY0 202 aa10.23□□□□□ -0.77
SCFD1-212ENST00000554486 GRIN2AQ12879 1464 aa10.23□□□□□ -0.77
SCFD1-212ENST00000554486 LOC105371045A0A1W2PR82 267 aa10.22□□□□□ -0.77
SCFD1-212ENST00000554486 GGCXP38435 758 aa10.22□□□□□ -0.77
SCFD1-212ENST00000554486 GCGRP47871 477 aa10.22□□□□□ -0.77
SCFD1-212ENST00000554486 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
SCFD1-212ENST00000554486 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-212ENST00000554486 SPIRE2Q8WWL2 714 aa10.22□□□□□ -0.77
SCFD1-212ENST00000554486 GOLGA3Q08378 1498 aa10.22□□□□□ -0.77
SCFD1-212ENST00000554486 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.77
SCFD1-212ENST00000554486 GOPCQ9HD26 462 aa10.21□□□□□ -0.77
SCFD1-212ENST00000554486 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
SCFD1-212ENST00000554486 MYSM1Q5VVJ2 828 aa10.2□□□□□ -0.78
SCFD1-212ENST00000554486 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
SCFD1-212ENST00000554486 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
SCFD1-212ENST00000554486 SCUBE3Q8IX30 993 aa10.18□□□□□ -0.78
SCFD1-212ENST00000554486 NUP160Q12769 1436 aa10.17□□□□□ -0.78
SCFD1-212ENST00000554486 FUT2Q10981 343 aa10.17□□□□□ -0.78
SCFD1-212ENST00000554486 PUS10Q3MIT2 529 aaKnown RBP10.17□□□□□ -0.78
SCFD1-212ENST00000554486 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-212ENST00000554486 PPP1R18Q6NYC8 613 aa10.17□□□□□ -0.78
SCFD1-212ENST00000554486 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-212ENST00000554486 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
SCFD1-212ENST00000554486 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.17□□□□□ -0.78
SCFD1-212ENST00000554486 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
SCFD1-212ENST00000554486 SKIV2LQ15477 1246 aaKnown RBP10.16□□□□□ -0.78
SCFD1-212ENST00000554486 GTF3C3Q9Y5Q9 886 aa10.16□□□□□ -0.78
SCFD1-212ENST00000554486 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.78
SCFD1-212ENST00000554486 MOXD2PA6NHM9 499 aa10.15□□□□□ -0.78
SCFD1-212ENST00000554486 KDM4AO75164 1064 aa10.15□□□□□ -0.78
SCFD1-212ENST00000554486 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.78
SCFD1-212ENST00000554486 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
SCFD1-212ENST00000554486 LIMD1Q9UGP4 676 aa10.15□□□□□ -0.78
SCFD1-212ENST00000554486 TNIKQ9UKE5 1360 aa10.14□□□□□ -0.79
SCFD1-212ENST00000554486 NDUFV2P19404 249 aa10.14□□□□□ -0.79
SCFD1-212ENST00000554486 USP46P62068 366 aa10.14□□□□□ -0.79
SCFD1-212ENST00000554486 MORN1Q5T089 497 aa10.14□□□□□ -0.79
SCFD1-212ENST00000554486 HLA-CQ95604 372 aa10.14□□□□□ -0.79
SCFD1-212ENST00000554486 KIAA0586Q9BVV6 1533 aa10.13□□□□□ -0.79
SCFD1-212ENST00000554486 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.13□□□□□ -0.79
SCFD1-212ENST00000554486 CLASP1Q7Z460 1538 aa10.12□□□□□ -0.79
SCFD1-212ENST00000554486 SPTLC1O15269 473 aa10.12□□□□□ -0.79
SCFD1-212ENST00000554486 HOXA2O43364 376 aa10.12□□□□□ -0.79
SCFD1-212ENST00000554486 ADH1BP00325 375 aa10.12□□□□□ -0.79
SCFD1-212ENST00000554486 RSBN1LQ6PCB5 846 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-212ENST00000554486 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
SCFD1-212ENST00000554486 IQGAP2Q13576 1575 aa10.11□□□□□ -0.79
SCFD1-212ENST00000554486 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-212ENST00000554486 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
SCFD1-212ENST00000554486 DIXDC1Q155Q3 683 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms