RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 NWD1Q149M9 1564 aa12.15□□□□□ -0.46
RDH11-205ENST00000553816 PPP1R15AO75807 674 aaPredicted RBP12.15□□□□□ -0.46
RDH11-205ENST00000553816 HRCP23327 699 aa12.15□□□□□ -0.46
RDH11-205ENST00000553816 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
RDH11-205ENST00000553816 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
RDH11-205ENST00000553816 SETBP1Q9Y6X0 1596 aa12.14□□□□□ -0.47
RDH11-205ENST00000553816 CCDC144AA2RUR9 1427 aa12.14□□□□□ -0.47
RDH11-205ENST00000553816 SPATA31E1Q6ZUB1 1445 aa12.14□□□□□ -0.47
RDH11-205ENST00000553816 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
RDH11-205ENST00000553816 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
RDH11-205ENST00000553816 BCANQ96GW7 911 aa12.14□□□□□ -0.47
RDH11-205ENST00000553816 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
RDH11-205ENST00000553816 C7P10643 843 aa12.13□□□□□ -0.47
RDH11-205ENST00000553816 HDGFP51858 240 aaKnown RBP12.13□□□□□ -0.47
RDH11-205ENST00000553816 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
RDH11-205ENST00000553816 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
RDH11-205ENST00000553816 LCE2DQ5TA82 110 aaPredicted RBP12.12□□□□□ -0.47
RDH11-205ENST00000553816 ANKRD30BQ9BXX2 1392 aa12.12□□□□□ -0.47
RDH11-205ENST00000553816 RGL3Q3MIN7 710 aa12.11□□□□□ -0.47
RDH11-205ENST00000553816 TBX22Q9Y458 520 aa12.11□□□□□ -0.47
RDH11-205ENST00000553816 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
RDH11-205ENST00000553816 KCNA6P17658 529 aa12.1□□□□□ -0.47
RDH11-205ENST00000553816 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
RDH11-205ENST00000553816 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
RDH11-205ENST00000553816 XRN1Q8IZH2 1706 aaKnown RBP12.09□□□□□ -0.47
RDH11-205ENST00000553816 TRIM26Q12899 539 aaPredicted RBP12.09□□□□□ -0.47
RDH11-205ENST00000553816 RPGRIP1LQ68CZ1 1315 aa12.08□□□□□ -0.48
RDH11-205ENST00000553816 ADGRF5Q8IZF2 1346 aa12.08□□□□□ -0.48
RDH11-205ENST00000553816 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.48
RDH11-205ENST00000553816 METP08581 1390 aa12.07□□□□□ -0.48
RDH11-205ENST00000553816 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
RDH11-205ENST00000553816 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
RDH11-205ENST00000553816 TMEM94Q12767 1356 aa12.06□□□□□ -0.48
RDH11-205ENST00000553816 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
RDH11-205ENST00000553816 PROSER2Q86WR7 435 aaPredicted RBP12.06□□□□□ -0.48
RDH11-205ENST00000553816 PIK3R4Q99570 1358 aa12.05□□□□□ -0.48
RDH11-205ENST00000553816 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
RDH11-205ENST00000553816 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
RDH11-205ENST00000553816 POTEFA5A3E0 1075 aa12.04□□□□□ -0.48
RDH11-205ENST00000553816 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
RDH11-205ENST00000553816 ASXL1Q8IXJ9 1541 aa12.04□□□□□ -0.48
RDH11-205ENST00000553816 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
RDH11-205ENST00000553816 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
RDH11-205ENST00000553816 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
RDH11-205ENST00000553816 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
RDH11-205ENST00000553816 PIK3C2GO75747 1445 aa12.03□□□□□ -0.48
RDH11-205ENST00000553816 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.48
RDH11-205ENST00000553816 MYOM2P54296 1465 aa12.02□□□□□ -0.49
RDH11-205ENST00000553816 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
RDH11-205ENST00000553816 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
RDH11-205ENST00000553816 DHX57Q6P158 1386 aaKnown RBP12.01□□□□□ -0.49
RDH11-205ENST00000553816 TOM1O60784 492 aa12□□□□□ -0.49
RDH11-205ENST00000553816 PCDH10Q9P2E7 1040 aa12□□□□□ -0.49
RDH11-205ENST00000553816 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
RDH11-205ENST00000553816 TMEM132EQ6IEE7 984 aa11.99□□□□□ -0.49
RDH11-205ENST00000553816 PROM2Q8N271 834 aa11.99□□□□□ -0.49
RDH11-205ENST00000553816 SIN3AQ96ST3 1273 aa11.99□□□□□ -0.49
RDH11-205ENST00000553816 LAMC1P11047 1609 aa11.99□□□□□ -0.49
RDH11-205ENST00000553816 ROBO1Q9Y6N7 1651 aa11.99□□□□□ -0.49
RDH11-205ENST00000553816 ROBO2Q9HCK4 1378 aa11.98□□□□□ -0.49
RDH11-205ENST00000553816 CFAP70Q5T0N1 1121 aa11.98□□□□□ -0.49
RDH11-205ENST00000553816 DCAF11Q8TEB1 546 aa11.98□□□□□ -0.49
RDH11-205ENST00000553816 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
RDH11-205ENST00000553816 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
RDH11-205ENST00000553816 MSH6P52701 1360 aa11.97□□□□□ -0.49
RDH11-205ENST00000553816 C14orf93Q9H972 538 aaKnown RBP11.97□□□□□ -0.49
RDH11-205ENST00000553816 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.49
RDH11-205ENST00000553816 NCOA3Q9Y6Q9 1424 aa11.96□□□□□ -0.49
RDH11-205ENST00000553816 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
RDH11-205ENST00000553816 MAP3K13O43283 966 aa11.95□□□□□ -0.5
RDH11-205ENST00000553816 HSPA1LP34931 641 aa11.95□□□□□ -0.5
RDH11-205ENST00000553816 ADGRB1O14514 1584 aa11.95□□□□□ -0.5
RDH11-205ENST00000553816 YTHDC2Q9H6S0 1430 aaKnown RBP11.94□□□□□ -0.5
RDH11-205ENST00000553816 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
RDH11-205ENST00000553816 STK26Q9P289 416 aa11.94□□□□□ -0.5
RDH11-205ENST00000553816 TECPR2O15040 1411 aa11.94□□□□□ -0.5
RDH11-205ENST00000553816 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
RDH11-205ENST00000553816 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
RDH11-205ENST00000553816 PLEKHH1Q9ULM0 1364 aa11.93□□□□□ -0.5
RDH11-205ENST00000553816 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
RDH11-205ENST00000553816 PCGF6Q9BYE7 350 aa11.93□□□□□ -0.5
RDH11-205ENST00000553816 C19orf44Q9H6X5 657 aa11.93□□□□□ -0.5
RDH11-205ENST00000553816 KIAA1210Q9ULL0 1709 aa11.92□□□□□ -0.5
RDH11-205ENST00000553816 WAPLQ7Z5K2 1190 aa11.92□□□□□ -0.5
RDH11-205ENST00000553816 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
RDH11-205ENST00000553816 COLQQ9Y215 455 aaPredicted RBP11.92□□□□□ -0.5
RDH11-205ENST00000553816 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
RDH11-205ENST00000553816 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
RDH11-205ENST00000553816 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
RDH11-205ENST00000553816 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
RDH11-205ENST00000553816 SLAIN2Q9P270 581 aa11.91□□□□□ -0.5
RDH11-205ENST00000553816 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
RDH11-205ENST00000553816 MST1RQ04912 1400 aa11.91□□□□□ -0.5
RDH11-205ENST00000553816 PHLPP1O60346 1717 aa11.91□□□□□ -0.5
RDH11-205ENST00000553816 ATF3P18847 181 aa11.9□□□□□ -0.5
RDH11-205ENST00000553816 DCCP43146 1447 aa11.9□□□□□ -0.5
RDH11-205ENST00000553816 TRPM1Q7Z4N2 1603 aa11.89□□□□□ -0.51
RDH11-205ENST00000553816 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
RDH11-205ENST00000553816 NHSL1Q5SYE7 1610 aa11.89□□□□□ -0.51
RDH11-205ENST00000553816 FMN2Q9NZ56 1722 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms