RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 BRWD3Q6RI45 1802 aa18.55■□□□□ 0.56
SNRPF-205ENST00000553192 SPHKAPQ2M3C7 1700 aa18.54■□□□□ 0.56
SNRPF-205ENST00000553192 E9PCH4 1651 aa18.54■□□□□ 0.56
SNRPF-205ENST00000553192 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.54■□□□□ 0.56
SNRPF-205ENST00000553192 MARF1Q9Y4F3 1742 aaKnown RBP18.53■□□□□ 0.56
SNRPF-205ENST00000553192 PXDNQ92626 1479 aa18.52■□□□□ 0.56
SNRPF-205ENST00000553192 ONECUT3O60422 494 aaPredicted RBP18.51■□□□□ 0.55
SNRPF-205ENST00000553192 BAG6P46379 1132 aa18.5■□□□□ 0.55
SNRPF-205ENST00000553192 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
SNRPF-205ENST00000553192 ROBO2Q9HCK4 1378 aa18.5■□□□□ 0.55
SNRPF-205ENST00000553192 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
SNRPF-205ENST00000553192 KRT27Q7Z3Y8 459 aa18.49■□□□□ 0.55
SNRPF-205ENST00000553192 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
SNRPF-205ENST00000553192 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
SNRPF-205ENST00000553192 EN1Q05925 392 aaPredicted RBP18.47■□□□□ 0.55
SNRPF-205ENST00000553192 FOXO3O43524 673 aa18.46■□□□□ 0.55
SNRPF-205ENST00000553192 VPS72Q15906 364 aa18.46■□□□□ 0.55
SNRPF-205ENST00000553192 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
SNRPF-205ENST00000553192 ZNF326Q5BKZ1 582 aaKnown RBP18.43■□□□□ 0.54
SNRPF-205ENST00000553192 PRAG1Q86YV5 1406 aa18.42■□□□□ 0.54
SNRPF-205ENST00000553192 NEXMIFQ5QGS0 1516 aa18.41■□□□□ 0.54
SNRPF-205ENST00000553192 SPATA31A3Q5VYP0 1347 aa18.4■□□□□ 0.54
SNRPF-205ENST00000553192 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
SNRPF-205ENST00000553192 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
SNRPF-205ENST00000553192 DISP2A7MBM2 1401 aa18.38■□□□□ 0.53
SNRPF-205ENST00000553192 HFM1A2PYH4 1435 aa18.37■□□□□ 0.53
SNRPF-205ENST00000553192 NUP155O75694 1391 aa18.36■□□□□ 0.53
SNRPF-205ENST00000553192 EZH2Q15910 746 aaKnown RBP18.36■□□□□ 0.53
SNRPF-205ENST00000553192 FAM182BQ5T319 152 aa18.36■□□□□ 0.53
SNRPF-205ENST00000553192 CDC42BPGQ6DT37 1551 aa18.36■□□□□ 0.53
SNRPF-205ENST00000553192 CCDC9Q9Y3X0 531 aaKnown RBP18.36■□□□□ 0.53
SNRPF-205ENST00000553192 LRPPRCP42704 1394 aaKnown RBP18.35■□□□□ 0.53
SNRPF-205ENST00000553192 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
SNRPF-205ENST00000553192 CABLES1Q8TDN4 633 aa18.34■□□□□ 0.53
SNRPF-205ENST00000553192 NUTM2FA1L443 756 aa18.33■□□□□ 0.52
SNRPF-205ENST00000553192 FAM98CQ17RN3 349 aaKnown RBP18.33■□□□□ 0.52
SNRPF-205ENST00000553192 CAMKK2Q96RR4 588 aa18.32■□□□□ 0.52
SNRPF-205ENST00000553192 A0A0G2JS52 829 aa18.31■□□□□ 0.52
SNRPF-205ENST00000553192 MYT1Q01538 1121 aa18.31■□□□□ 0.52
SNRPF-205ENST00000553192 RGPD1P0DJD0 1748 aa18.31■□□□□ 0.52
SNRPF-205ENST00000553192 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
SNRPF-205ENST00000553192 NWD2Q9ULI1 1742 aa18.3■□□□□ 0.52
SNRPF-205ENST00000553192 FAM83GA6ND36 823 aa18.3■□□□□ 0.52
SNRPF-205ENST00000553192 KRT28Q7Z3Y7 464 aa18.29■□□□□ 0.52
SNRPF-205ENST00000553192 NAIPQ13075 1403 aa18.29■□□□□ 0.52
SNRPF-205ENST00000553192 TNS1Q9HBL0 1735 aaKnown RBP18.29■□□□□ 0.52
SNRPF-205ENST00000553192 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
SNRPF-205ENST00000553192 CLTCL1P53675 1640 aa18.27■□□□□ 0.52
SNRPF-205ENST00000553192 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
SNRPF-205ENST00000553192 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
SNRPF-205ENST00000553192 ZNF784Q8NCA9 323 aaPredicted RBP18.26■□□□□ 0.51
SNRPF-205ENST00000553192 TNS3Q68CZ2 1445 aa18.25■□□□□ 0.51
SNRPF-205ENST00000553192 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
SNRPF-205ENST00000553192 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
SNRPF-205ENST00000553192 ROCK1Q13464 1354 aa18.25■□□□□ 0.51
SNRPF-205ENST00000553192 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
SNRPF-205ENST00000553192 APLP2Q06481 763 aa18.24■□□□□ 0.51
SNRPF-205ENST00000553192 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
SNRPF-205ENST00000553192 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
SNRPF-205ENST00000553192 NINLQ9Y2I6 1382 aa18.22■□□□□ 0.51
SNRPF-205ENST00000553192 TRIM37O94972 964 aa18.22■□□□□ 0.51
SNRPF-205ENST00000553192 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
SNRPF-205ENST00000553192 ABCA3Q99758 1704 aa18.2■□□□□ 0.5
SNRPF-205ENST00000553192 PARD3Q8TEW0 1356 aa18.2■□□□□ 0.5
SNRPF-205ENST00000553192 PLEKHH1Q9ULM0 1364 aa18.2■□□□□ 0.5
SNRPF-205ENST00000553192 SPON1Q9HCB6 807 aa18.2■□□□□ 0.5
SNRPF-205ENST00000553192 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
SNRPF-205ENST00000553192 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
SNRPF-205ENST00000553192 KIF1AQ12756 1690 aa18.19■□□□□ 0.5
SNRPF-205ENST00000553192 THSD7AQ9UPZ6 1657 aa18.19■□□□□ 0.5
SNRPF-205ENST00000553192 CAMTA1Q9Y6Y1 1673 aa18.19■□□□□ 0.5
SNRPF-205ENST00000553192 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
SNRPF-205ENST00000553192 APBA3O96018 575 aa18.19■□□□□ 0.5
SNRPF-205ENST00000553192 PPP1R1BQ9UD71 204 aaPredicted RBP18.19■□□□□ 0.5
SNRPF-205ENST00000553192 SBNO1A3KN83 1393 aa18.18■□□□□ 0.5
SNRPF-205ENST00000553192 TECPR2O15040 1411 aa18.18■□□□□ 0.5
SNRPF-205ENST00000553192 KCNQ2O43526 872 aa18.18■□□□□ 0.5
SNRPF-205ENST00000553192 C1QTNF8P60827 252 aa18.18■□□□□ 0.5
SNRPF-205ENST00000553192 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
SNRPF-205ENST00000553192 FMN2Q9NZ56 1722 aa18.17■□□□□ 0.5
SNRPF-205ENST00000553192 PSME1Q06323 249 aa18.16■□□□□ 0.5
SNRPF-205ENST00000553192 PHF8Q9UPP1 1060 aa18.16■□□□□ 0.5
SNRPF-205ENST00000553192 ARHGEF10O15013 1369 aa18.16■□□□□ 0.5
SNRPF-205ENST00000553192 RREB1Q92766 1687 aa18.15■□□□□ 0.5
SNRPF-205ENST00000553192 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
SNRPF-205ENST00000553192 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
SNRPF-205ENST00000553192 STK26Q9P289 416 aa18.15■□□□□ 0.5
SNRPF-205ENST00000553192 NUP188Q5SRE5 1749 aa18.15■□□□□ 0.5
SNRPF-205ENST00000553192 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
SNRPF-205ENST00000553192 NBPF14Q5TI25 921 aa18.14■□□□□ 0.49
SNRPF-205ENST00000553192 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
SNRPF-205ENST00000553192 KIF1BO60333 1816 aa18.13■□□□□ 0.49
SNRPF-205ENST00000553192 NRXN1Q9ULB1 1477 aa18.13■□□□□ 0.49
SNRPF-205ENST00000553192 ABCC11Q96J66 1382 aa18.12■□□□□ 0.49
SNRPF-205ENST00000553192 UTRNP46939 3433 aa18.11■□□□□ 0.49
SNRPF-205ENST00000553192 COL14A1Q05707 1796 aaKnown RBP18.09■□□□□ 0.49
SNRPF-205ENST00000553192 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
SNRPF-205ENST00000553192 SPATA31A1Q5TZJ5 1347 aa18.09■□□□□ 0.49
SNRPF-205ENST00000553192 ADGRF5Q8IZF2 1346 aa18.09■□□□□ 0.49
SNRPF-205ENST00000553192 PPLO60437 1756 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms