RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
RAB5B-210ENST00000553116 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
RAB5B-210ENST00000553116 WAPLQ7Z5K2 1190 aa11.09□□□□□ -0.63
RAB5B-210ENST00000553116 LRPPRCP42704 1394 aaKnown RBP11.09□□□□□ -0.63
RAB5B-210ENST00000553116 PPP2R1AP30153 589 aa11.09□□□□□ -0.63
RAB5B-210ENST00000553116 CARD14Q9BXL6 1004 aa11.09□□□□□ -0.63
RAB5B-210ENST00000553116 RIMS1Q86UR5 1692 aaKnown RBP11.09□□□□□ -0.63
RAB5B-210ENST00000553116 NRXN3Q9Y4C0 1643 aa11.08□□□□□ -0.64
RAB5B-210ENST00000553116 SETD1AO15047 1707 aaKnown RBP11.08□□□□□ -0.64
RAB5B-210ENST00000553116 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
RAB5B-210ENST00000553116 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
RAB5B-210ENST00000553116 METP08581 1390 aa11.08□□□□□ -0.64
RAB5B-210ENST00000553116 ATAD2Q6PL18 1390 aa11.08□□□□□ -0.64
RAB5B-210ENST00000553116 TNNT2P45379 298 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-210ENST00000553116 MORC1Q86VD1 984 aa11.07□□□□□ -0.64
RAB5B-210ENST00000553116 THEMISQ8N1K5 641 aaPredicted RBP11.07□□□□□ -0.64
RAB5B-210ENST00000553116 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
RAB5B-210ENST00000553116 NPC1L1Q9UHC9 1359 aa11.07□□□□□ -0.64
RAB5B-210ENST00000553116 LTKP29376 864 aa11.07□□□□□ -0.64
RAB5B-210ENST00000553116 PUS7Q96PZ0 661 aaKnown RBP11.07□□□□□ -0.64
RAB5B-210ENST00000553116 CDK19Q9BWU1 502 aa11.07□□□□□ -0.64
RAB5B-210ENST00000553116 PRKCSHP14314 528 aaPredicted RBP11.06□□□□□ -0.64
RAB5B-210ENST00000553116 PLEKHH1Q9ULM0 1364 aa11.06□□□□□ -0.64
RAB5B-210ENST00000553116 FKBP8Q14318 412 aa11.06□□□□□ -0.64
RAB5B-210ENST00000553116 SLC26A8Q96RN1 970 aa11.06□□□□□ -0.64
RAB5B-210ENST00000553116 ANKRD36BQ8N2N9 1353 aa11.06□□□□□ -0.64
RAB5B-210ENST00000553116 ABCC11Q96J66 1382 aa11.05□□□□□ -0.64
RAB5B-210ENST00000553116 DLC1Q96QB1 1528 aa11.05□□□□□ -0.64
RAB5B-210ENST00000553116 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
RAB5B-210ENST00000553116 NINLQ9Y2I6 1382 aa11.05□□□□□ -0.64
RAB5B-210ENST00000553116 PLEKHG1Q9ULL1 1385 aa11.04□□□□□ -0.64
RAB5B-210ENST00000553116 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
RAB5B-210ENST00000553116 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
RAB5B-210ENST00000553116 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
RAB5B-210ENST00000553116 CABP1Q9NZU7 370 aa11.02□□□□□ -0.65
RAB5B-210ENST00000553116 ADAMTS13Q76LX8 1427 aa11.02□□□□□ -0.65
RAB5B-210ENST00000553116 KNDC1Q76NI1 1749 aa11.02□□□□□ -0.65
RAB5B-210ENST00000553116 CEP170BQ9Y4F5 1589 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-210ENST00000553116 ADAMTS8Q9UP79 889 aa11.01□□□□□ -0.65
RAB5B-210ENST00000553116 SLIT1O75093 1534 aa11.01□□□□□ -0.65
RAB5B-210ENST00000553116 WASLO00401 505 aaPredicted RBP11.01□□□□□ -0.65
RAB5B-210ENST00000553116 USP32Q8NFA0 1604 aa11.01□□□□□ -0.65
RAB5B-210ENST00000553116 CPS1P31327 1500 aa11□□□□□ -0.65
RAB5B-210ENST00000553116 NSD2O96028 1365 aa11□□□□□ -0.65
RAB5B-210ENST00000553116 FAM135BQ49AJ0 1406 aa11□□□□□ -0.65
RAB5B-210ENST00000553116 ARHGAP23Q9P227 1491 aa10.99□□□□□ -0.65
RAB5B-210ENST00000553116 IRX6P78412 446 aaPredicted RBP10.99□□□□□ -0.65
RAB5B-210ENST00000553116 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
RAB5B-210ENST00000553116 ROBO2Q9HCK4 1378 aa10.99□□□□□ -0.65
RAB5B-210ENST00000553116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
RAB5B-210ENST00000553116 NUDCQ9Y266 331 aa10.99□□□□□ -0.65
RAB5B-210ENST00000553116 TECPR2O15040 1411 aa10.99□□□□□ -0.65
RAB5B-210ENST00000553116 NUTM2FA1L443 756 aa10.99□□□□□ -0.65
RAB5B-210ENST00000553116 CFAP53Q96M91 514 aa10.99□□□□□ -0.65
RAB5B-210ENST00000553116 ADAMTSL3P82987 1691 aa10.98□□□□□ -0.65
RAB5B-210ENST00000553116 BLMP54132 1417 aaPredicted RBP10.98□□□□□ -0.65
RAB5B-210ENST00000553116 AMOTL2Q9Y2J4 779 aa10.98□□□□□ -0.65
RAB5B-210ENST00000553116 PPIP5K1Q6PFW1 1433 aa10.98□□□□□ -0.65
RAB5B-210ENST00000553116 SETD1BQ9UPS6 1966 aaKnown RBP10.98□□□□□ -0.65
RAB5B-210ENST00000553116 CCDC146Q8IYE0 955 aa10.97□□□□□ -0.65
RAB5B-210ENST00000553116 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
RAB5B-210ENST00000553116 SIRT1Q96EB6 747 aa10.97□□□□□ -0.65
RAB5B-210ENST00000553116 TBX22Q9Y458 520 aa10.97□□□□□ -0.65
RAB5B-210ENST00000553116 SMG6Q86US8 1419 aaKnown RBP10.97□□□□□ -0.65
RAB5B-210ENST00000553116 MTHFSP49914 203 aa10.97□□□□□ -0.65
RAB5B-210ENST00000553116 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
RAB5B-210ENST00000553116 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.66
RAB5B-210ENST00000553116 ATP7BP35670 1465 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 INSRP06213 1382 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 DIP2AQ14689 1571 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 POLR3AO14802 1390 aaPredicted RBP10.95□□□□□ -0.66
RAB5B-210ENST00000553116 MED14O60244 1454 aa10.95□□□□□ -0.66
RAB5B-210ENST00000553116 FYB1O15117 783 aa10.94□□□□□ -0.66
RAB5B-210ENST00000553116 ZNF142P52746 1687 aaPredicted RBP10.94□□□□□ -0.66
RAB5B-210ENST00000553116 PDE3BQ13370 1112 aa10.94□□□□□ -0.66
RAB5B-210ENST00000553116 ITSN1Q15811 1721 aa10.93□□□□□ -0.66
RAB5B-210ENST00000553116 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.93□□□□□ -0.66
RAB5B-210ENST00000553116 ANKRD26Q9UPS8 1709 aa10.93□□□□□ -0.66
RAB5B-210ENST00000553116 PPM1GO15355 546 aaPredicted RBP10.93□□□□□ -0.66
RAB5B-210ENST00000553116 APAF1O14727 1248 aa10.92□□□□□ -0.66
RAB5B-210ENST00000553116 KCNA6P17658 529 aa10.92□□□□□ -0.66
RAB5B-210ENST00000553116 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
RAB5B-210ENST00000553116 PTCH1Q13635 1447 aa10.91□□□□□ -0.66
RAB5B-210ENST00000553116 U2SURPO15042 1029 aaKnown RBP10.91□□□□□ -0.66
RAB5B-210ENST00000553116 PRR36Q9H6K5 1346 aa10.91□□□□□ -0.66
RAB5B-210ENST00000553116 EDC4Q6P2E9 1401 aaKnown RBP10.91□□□□□ -0.66
RAB5B-210ENST00000553116 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
RAB5B-210ENST00000553116 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
RAB5B-210ENST00000553116 ADGRB2O60241 1585 aa10.91□□□□□ -0.66
RAB5B-210ENST00000553116 CDC42BPGQ6DT37 1551 aa10.91□□□□□ -0.66
RAB5B-210ENST00000553116 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
RAB5B-210ENST00000553116 NME9Q86XW9 330 aa10.9□□□□□ -0.66
RAB5B-210ENST00000553116 COG3Q96JB2 828 aa10.89□□□□□ -0.67
RAB5B-210ENST00000553116 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
RAB5B-210ENST00000553116 SHPRHQ149N8 1683 aa10.89□□□□□ -0.67
RAB5B-210ENST00000553116 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms