RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 TNRQ92752 1358 aa13.5□□□□□ -0.25
CNOT2-243ENST00000553078 FBXO31Q5XUX0 539 aaPredicted RBP13.5□□□□□ -0.25
CNOT2-243ENST00000553078 STK26Q9P289 416 aa13.5□□□□□ -0.25
CNOT2-243ENST00000553078 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
CNOT2-243ENST00000553078 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
CNOT2-243ENST00000553078 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-243ENST00000553078 PTPRMP28827 1452 aa13.48□□□□□ -0.25
CNOT2-243ENST00000553078 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
CNOT2-243ENST00000553078 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
CNOT2-243ENST00000553078 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
CNOT2-243ENST00000553078 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
CNOT2-243ENST00000553078 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
CNOT2-243ENST00000553078 RNF123Q5XPI4 1314 aa13.45□□□□□ -0.26
CNOT2-243ENST00000553078 RRP1P56182 461 aaKnown RBP13.45□□□□□ -0.26
CNOT2-243ENST00000553078 SAFB2Q14151 953 aaKnown RBP eCLIP13.45□□□□□ -0.26
CNOT2-243ENST00000553078 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
CNOT2-243ENST00000553078 NLRP1Q9C000 1473 aa13.44□□□□□ -0.26
CNOT2-243ENST00000553078 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
CNOT2-243ENST00000553078 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
CNOT2-243ENST00000553078 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
CNOT2-243ENST00000553078 CARD14Q9BXL6 1004 aa13.43□□□□□ -0.26
CNOT2-243ENST00000553078 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
CNOT2-243ENST00000553078 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
CNOT2-243ENST00000553078 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
CNOT2-243ENST00000553078 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
CNOT2-243ENST00000553078 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
CNOT2-243ENST00000553078 ATP7BP35670 1465 aa13.41□□□□□ -0.26
CNOT2-243ENST00000553078 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
CNOT2-243ENST00000553078 MED14O60244 1454 aa13.4□□□□□ -0.26
CNOT2-243ENST00000553078 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
CNOT2-243ENST00000553078 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
CNOT2-243ENST00000553078 ANKRD26Q9UPS8 1709 aa13.39□□□□□ -0.27
CNOT2-243ENST00000553078 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
CNOT2-243ENST00000553078 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
CNOT2-243ENST00000553078 E9PSI1 815 aa13.38□□□□□ -0.27
CNOT2-243ENST00000553078 PNNQ9H307 717 aaKnown RBP13.38□□□□□ -0.27
CNOT2-243ENST00000553078 CPS1P31327 1500 aa13.38□□□□□ -0.27
CNOT2-243ENST00000553078 SETD1AO15047 1707 aaKnown RBP13.37□□□□□ -0.27
CNOT2-243ENST00000553078 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
CNOT2-243ENST00000553078 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
CNOT2-243ENST00000553078 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
CNOT2-243ENST00000553078 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
CNOT2-243ENST00000553078 CDK19Q9BWU1 502 aa13.37□□□□□ -0.27
CNOT2-243ENST00000553078 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
CNOT2-243ENST00000553078 NEFMP07197 916 aa13.36□□□□□ -0.27
CNOT2-243ENST00000553078 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
CNOT2-243ENST00000553078 SIRT1Q96EB6 747 aa13.36□□□□□ -0.27
CNOT2-243ENST00000553078 TECPR2O15040 1411 aa13.36□□□□□ -0.27
CNOT2-243ENST00000553078 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
CNOT2-243ENST00000553078 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
CNOT2-243ENST00000553078 KIF20BQ96Q89 1820 aa13.35□□□□□ -0.27
CNOT2-243ENST00000553078 NKTRP30414 1462 aaKnown RBP13.35□□□□□ -0.27
CNOT2-243ENST00000553078 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
CNOT2-243ENST00000553078 APAF1O14727 1248 aa13.34□□□□□ -0.27
CNOT2-243ENST00000553078 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
CNOT2-243ENST00000553078 MTHFSP49914 203 aa13.34□□□□□ -0.27
CNOT2-243ENST00000553078 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
CNOT2-243ENST00000553078 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
CNOT2-243ENST00000553078 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
CNOT2-243ENST00000553078 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.28
CNOT2-243ENST00000553078 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
CNOT2-243ENST00000553078 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
CNOT2-243ENST00000553078 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
CNOT2-243ENST00000553078 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
CNOT2-243ENST00000553078 PPIP5K1Q6PFW1 1433 aa13.31□□□□□ -0.28
CNOT2-243ENST00000553078 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
CNOT2-243ENST00000553078 U2AF1L5P0DN76 240 aaPredicted RBP13.31□□□□□ -0.28
CNOT2-243ENST00000553078 U2AF1Q01081 240 aaKnown RBP eCLIP13.31□□□□□ -0.28
CNOT2-243ENST00000553078 SLFN5Q08AF3 891 aa13.31□□□□□ -0.28
CNOT2-243ENST00000553078 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
CNOT2-243ENST00000553078 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
CNOT2-243ENST00000553078 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
CNOT2-243ENST00000553078 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
CNOT2-243ENST00000553078 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
CNOT2-243ENST00000553078 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
CNOT2-243ENST00000553078 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
CNOT2-243ENST00000553078 C3P01024 1663 aa13.3□□□□□ -0.28
CNOT2-243ENST00000553078 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
CNOT2-243ENST00000553078 METP08581 1390 aa13.29□□□□□ -0.28
CNOT2-243ENST00000553078 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
CNOT2-243ENST00000553078 SLIT1O75093 1534 aa13.29□□□□□ -0.28
CNOT2-243ENST00000553078 ITSN1Q15811 1721 aa13.28□□□□□ -0.28
CNOT2-243ENST00000553078 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
CNOT2-243ENST00000553078 CCDC27Q2M243 656 aa13.28□□□□□ -0.28
CNOT2-243ENST00000553078 WAPLQ7Z5K2 1190 aa13.28□□□□□ -0.28
CNOT2-243ENST00000553078 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
CNOT2-243ENST00000553078 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
CNOT2-243ENST00000553078 THEMISQ8N1K5 641 aaPredicted RBP13.28□□□□□ -0.28
CNOT2-243ENST00000553078 DIAPH1O60610 1272 aaKnown RBP13.27□□□□□ -0.29
CNOT2-243ENST00000553078 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.29
CNOT2-243ENST00000553078 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
CNOT2-243ENST00000553078 FYB1O15117 783 aa13.26□□□□□ -0.29
CNOT2-243ENST00000553078 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
CNOT2-243ENST00000553078 RBM19Q9Y4C8 960 aaKnown RBP13.26□□□□□ -0.29
CNOT2-243ENST00000553078 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
CNOT2-243ENST00000553078 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
CNOT2-243ENST00000553078 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
CNOT2-243ENST00000553078 TCP11L2Q8N4U5 519 aa13.25□□□□□ -0.29
CNOT2-243ENST00000553078 NUDT16Q96DE0 195 aaKnown RBP13.25□□□□□ -0.29
CNOT2-243ENST00000553078 COG3Q96JB2 828 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms