RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 NLRP13Q86W25 1043 aa10.8□□□□□ -0.68
CHPT1-208ENST00000552215 TCERG1O14776 1098 aaKnown RBP10.8□□□□□ -0.68
CHPT1-208ENST00000552215 USHBP1Q8N6Y0 703 aa10.8□□□□□ -0.68
CHPT1-208ENST00000552215 CARD14Q9BXL6 1004 aa10.8□□□□□ -0.68
CHPT1-208ENST00000552215 EMILIN1Q9Y6C2 1016 aa10.8□□□□□ -0.68
CHPT1-208ENST00000552215 APAF1O14727 1248 aa10.79□□□□□ -0.68
CHPT1-208ENST00000552215 EVA1CP58658 441 aa10.79□□□□□ -0.68
CHPT1-208ENST00000552215 CEP152O94986 1710 aa10.79□□□□□ -0.68
CHPT1-208ENST00000552215 RALBP1Q15311 655 aa10.79□□□□□ -0.68
CHPT1-208ENST00000552215 KDM5DQ9BY66 1539 aa10.79□□□□□ -0.68
CHPT1-208ENST00000552215 NLRP2Q9NX02 1062 aa10.79□□□□□ -0.68
CHPT1-208ENST00000552215 ADAMTS8Q9UP79 889 aa10.79□□□□□ -0.68
CHPT1-208ENST00000552215 SPATA31E1Q6ZUB1 1445 aa10.78□□□□□ -0.68
CHPT1-208ENST00000552215 TBX22Q9Y458 520 aa10.78□□□□□ -0.68
CHPT1-208ENST00000552215 NSD3Q9BZ95 1437 aa10.78□□□□□ -0.68
CHPT1-208ENST00000552215 PPP2R1AP30153 589 aa10.78□□□□□ -0.68
CHPT1-208ENST00000552215 ZNF428Q96B54 188 aa10.78□□□□□ -0.68
CHPT1-208ENST00000552215 MAP3K4Q9Y6R4 1608 aa10.78□□□□□ -0.68
CHPT1-208ENST00000552215 GLI2P10070 1586 aa10.77□□□□□ -0.68
CHPT1-208ENST00000552215 YTHDC2Q9H6S0 1430 aaKnown RBP10.77□□□□□ -0.68
CHPT1-208ENST00000552215 SCAF11Q99590 1463 aaKnown RBP10.77□□□□□ -0.68
CHPT1-208ENST00000552215 FRAT1Q92837 279 aaPredicted RBP10.77□□□□□ -0.69
CHPT1-208ENST00000552215 ZNF330Q9Y3S2 320 aaPredicted RBP10.77□□□□□ -0.69
CHPT1-208ENST00000552215 MYBBP1AQ9BQG0 1328 aaKnown RBP10.77□□□□□ -0.69
CHPT1-208ENST00000552215 INO80Q9ULG1 1556 aaPredicted RBP10.76□□□□□ -0.69
CHPT1-208ENST00000552215 PLXNC1O60486 1568 aa10.76□□□□□ -0.69
CHPT1-208ENST00000552215 KRT28Q7Z3Y7 464 aa10.76□□□□□ -0.69
CHPT1-208ENST00000552215 FRMPD1Q5SYB0 1578 aa10.76□□□□□ -0.69
CHPT1-208ENST00000552215 CLTCQ00610 1675 aaKnown RBP10.76□□□□□ -0.69
CHPT1-208ENST00000552215 BCL2L13Q9BXK5 485 aa10.76□□□□□ -0.69
CHPT1-208ENST00000552215 GPRASP1Q5JY77 1395 aa10.76□□□□□ -0.69
CHPT1-208ENST00000552215 CROCC2H7BZ55 1655 aa10.76□□□□□ -0.69
CHPT1-208ENST00000552215 NECTIN2Q92692 538 aa10.75□□□□□ -0.69
CHPT1-208ENST00000552215 ROBO2Q9HCK4 1378 aa10.75□□□□□ -0.69
CHPT1-208ENST00000552215 PTPRTO14522 1441 aa10.75□□□□□ -0.69
CHPT1-208ENST00000552215 MEX3CQ5U5Q3 659 aaKnown RBP10.75□□□□□ -0.69
CHPT1-208ENST00000552215 SYTL4Q96C24 671 aaPredicted RBP10.74□□□□□ -0.69
CHPT1-208ENST00000552215 KDM5CP41229 1560 aa10.74□□□□□ -0.69
CHPT1-208ENST00000552215 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
CHPT1-208ENST00000552215 DIAPH1O60610 1272 aaKnown RBP10.74□□□□□ -0.69
CHPT1-208ENST00000552215 CLTCL1P53675 1640 aa10.73□□□□□ -0.69
CHPT1-208ENST00000552215 C19orf44Q9H6X5 657 aa10.73□□□□□ -0.69
CHPT1-208ENST00000552215 PRDM11Q9NQV5 511 aa10.73□□□□□ -0.69
CHPT1-208ENST00000552215 FYB1O15117 783 aa10.73□□□□□ -0.69
CHPT1-208ENST00000552215 PPRC1Q5VV67 1664 aaKnown RBP10.73□□□□□ -0.69
CHPT1-208ENST00000552215 E9PCH4 1651 aa10.73□□□□□ -0.69
CHPT1-208ENST00000552215 A2ML1A8K2U0 1454 aa10.73□□□□□ -0.69
CHPT1-208ENST00000552215 CCER2I3L3R5 266 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 SULT6B1Q6IMI4 303 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 THUMPD2Q9BTF0 503 aaKnown RBP10.72□□□□□ -0.69
CHPT1-208ENST00000552215 RALGAPBQ86X10 1494 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 LMTK3Q96Q04 1460 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 HSP90AB2PQ58FF8 381 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
CHPT1-208ENST00000552215 DMRT2Q9Y5R5 561 aa10.71□□□□□ -0.69
CHPT1-208ENST00000552215 PTPRMP28827 1452 aa10.71□□□□□ -0.7
CHPT1-208ENST00000552215 RTF1Q92541 710 aaKnown RBP10.7□□□□□ -0.7
CHPT1-208ENST00000552215 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
CHPT1-208ENST00000552215 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
CHPT1-208ENST00000552215 TRPM2O94759 1503 aa10.7□□□□□ -0.7
CHPT1-208ENST00000552215 PRKAR2BP31323 418 aa10.7□□□□□ -0.7
CHPT1-208ENST00000552215 DDX54Q8TDD1 881 aaKnown RBP10.7□□□□□ -0.7
CHPT1-208ENST00000552215 RNF17Q9BXT8 1623 aaKnown RBP10.7□□□□□ -0.7
CHPT1-208ENST00000552215 PLIN1O60240 522 aa10.7□□□□□ -0.7
CHPT1-208ENST00000552215 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
CHPT1-208ENST00000552215 KAT6BQ8WYB5 2073 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 MSH6P52701 1360 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 ATAD2Q6PL18 1390 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 CLUAP1Q96AJ1 413 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 SLAIN2Q9P270 581 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 RICTORQ6R327 1708 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 ARHGEF40Q8TER5 1519 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
CHPT1-208ENST00000552215 LRPPRCP42704 1394 aaKnown RBP10.69□□□□□ -0.7
CHPT1-208ENST00000552215 TOM1L2Q6ZVM7 507 aa10.68□□□□□ -0.7
CHPT1-208ENST00000552215 MIS18AQ9NYP9 233 aa10.68□□□□□ -0.7
CHPT1-208ENST00000552215 TET3O43151 1660 aa10.68□□□□□ -0.7
CHPT1-208ENST00000552215 RIPK4P57078 832 aa10.68□□□□□ -0.7
CHPT1-208ENST00000552215 AMER1Q5JTC6 1135 aaPredicted RBP10.68□□□□□ -0.7
CHPT1-208ENST00000552215 LRRC59Q96AG4 307 aaKnown RBP10.68□□□□□ -0.7
CHPT1-208ENST00000552215 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
CHPT1-208ENST00000552215 RIMS1Q86UR5 1692 aaKnown RBP10.68□□□□□ -0.7
CHPT1-208ENST00000552215 A0A1W2PP64 1363 aa10.67□□□□□ -0.7
CHPT1-208ENST00000552215 TTC21BQ7Z4L5 1316 aa10.67□□□□□ -0.7
CHPT1-208ENST00000552215 TCP11L2Q8N4U5 519 aa10.67□□□□□ -0.7
CHPT1-208ENST00000552215 UNC13BO14795 1591 aa10.67□□□□□ -0.7
CHPT1-208ENST00000552215 PER1O15534 1290 aaPredicted RBP10.66□□□□□ -0.7
CHPT1-208ENST00000552215 AEBP1Q8IUX7 1158 aa10.66□□□□□ -0.7
CHPT1-208ENST00000552215 ARHGAP31Q2M1Z3 1444 aa10.66□□□□□ -0.7
CHPT1-208ENST00000552215 MADDQ8WXG6 1647 aa10.66□□□□□ -0.7
CHPT1-208ENST00000552215 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
CHPT1-208ENST00000552215 NGLY1Q96IV0 654 aa10.65□□□□□ -0.7
CHPT1-208ENST00000552215 PIK3C2GO75747 1445 aa10.65□□□□□ -0.7
CHPT1-208ENST00000552215 C8orf37Q96NL8 207 aa10.65□□□□□ -0.7
CHPT1-208ENST00000552215 TSR2Q969E8 191 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms