RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 HOMEZQ8IX15 550 aa4.21□□□□□ -1.74
CPSF6-207ENST00000551516 PROCA1Q8NCQ7 364 aaPredicted RBP4.21□□□□□ -1.74
CPSF6-207ENST00000551516 SPIRE2Q8WWL2 714 aa4.21□□□□□ -1.74
CPSF6-207ENST00000551516 TMEM134Q9H6X4 195 aa4.21□□□□□ -1.74
CPSF6-207ENST00000551516 CARMIL1Q5VZK9 1371 aa4.21□□□□□ -1.74
CPSF6-207ENST00000551516 TNIKQ9UKE5 1360 aa4.21□□□□□ -1.74
CPSF6-207ENST00000551516 UACAQ9BZF9 1416 aa4.21□□□□□ -1.74
CPSF6-207ENST00000551516 SMAPO00193 183 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 ARHGAP33O14559 1287 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 SLC4A3P48751 1232 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 RIC3Q7Z5B4 369 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 RDH13Q8NBN7 331 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 OTUD5Q96G74 571 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 ZBED2Q9BTP6 218 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.2□□□□□ -1.74
CPSF6-207ENST00000551516 PLSCR2Q9NRY7 297 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 KIAA1468Q9P260 1216 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 UGGT2Q9NYU1 1516 aa4.2□□□□□ -1.74
CPSF6-207ENST00000551516 PLB1Q6P1J6 1458 aa4.19□□□□□ -1.74
CPSF6-207ENST00000551516 RAD21O60216 631 aa4.19□□□□□ -1.74
CPSF6-207ENST00000551516 PSEN2P49810 448 aa4.19□□□□□ -1.74
CPSF6-207ENST00000551516 TMEM259Q4ZIN3 620 aa4.19□□□□□ -1.74
CPSF6-207ENST00000551516 VARS2Q5ST30 1063 aaKnown RBP4.19□□□□□ -1.74
CPSF6-207ENST00000551516 RABGEF1Q9UJ41 708 aa4.19□□□□□ -1.74
CPSF6-207ENST00000551516 ADGRL1O94910 1474 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 MAGI3Q5TCQ9 1506 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 A6NJR5 290 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 C3orf80F5H4A9 247 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 SPTLC1O15269 473 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 KDM4AO75164 1064 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 RFC5P40937 340 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 TUSC1Q2TAM9 212 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 BANK1Q8NDB2 785 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 SLC4A5Q9BY07 1137 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 LIMD1Q9UGP4 676 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 KIF27Q86VH2 1401 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 PRXQ9BXM0 1461 aa4.18□□□□□ -1.74
CPSF6-207ENST00000551516 MOXD2PA6NHM9 499 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 SPDYE5A6NIY4 337 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 NUTM2BA6NNL0 878 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-207ENST00000551516 NUTM2EB1AL46 878 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-207ENST00000551516 GJA5P36382 358 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 PBX2P40425 430 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 EMP3P54852 163 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 USP46P62068 366 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 MCM6Q14566 821 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 CSPP1Q1MSJ5 1256 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 SWT1Q5T5J6 900 aaKnown RBP4.17□□□□□ -1.74
CPSF6-207ENST00000551516 NUTM2DQ5VT03 806 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-207ENST00000551516 PPP2R2DQ66LE6 453 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 RSBN1LQ6PCB5 846 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-207ENST00000551516 NUTM2AQ8IVF1 878 aaPredicted RBP4.17□□□□□ -1.74
CPSF6-207ENST00000551516 CLUAP1Q96AJ1 413 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 MAP3K4Q9Y6R4 1608 aa4.17□□□□□ -1.74
CPSF6-207ENST00000551516 ST18O60284 1047 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 NDUFV2P19404 249 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 GCGRP47871 477 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 GRIPAP1Q4V328 841 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 SLF2Q8IX21 1173 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 ZNF687Q8N1G0 1237 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 NBPF3Q9H094 633 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 PRM3Q9NNZ6 103 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 SEPT9Q9UHD8 586 aaPredicted RBP4.16□□□□□ -1.74
CPSF6-207ENST00000551516 AXIN2Q9Y2T1 843 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 KDM6BO15054 1643 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 ARAP3Q8WWN8 1544 aa4.16□□□□□ -1.74
CPSF6-207ENST00000551516 ABCA8O94911 1581 aa4.15□□□□□ -1.74
CPSF6-207ENST00000551516 FAM205CA6NFA0 338 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 APBB1O00213 710 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 TRAK2O60296 914 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 LILRB3O75022 631 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 FAM98CQ17RN3 349 aaKnown RBP4.15□□□□□ -1.75
CPSF6-207ENST00000551516 PRPF38BQ5VTL8 546 aaKnown RBP4.15□□□□□ -1.75
CPSF6-207ENST00000551516 DMRTA1Q5VZB9 504 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 LAPTM4BQ86VI4 370 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 ZBTB3Q9H5J0 574 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 VPS9D1Q9Y2B5 631 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 ATP10BO94823 1461 aa4.15□□□□□ -1.75
CPSF6-207ENST00000551516 HECW2Q9P2P5 1572 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 WDR7Q9Y4E6 1490 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 ARID3CA6NKF2 412 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 HOXA2O43364 376 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 RNF40O75150 1001 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 SLC10A3P09131 477 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 FDX1P10109 184 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 POTEEQ6S8J3 1075 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 PROSER2Q86WR7 435 aaPredicted RBP4.14□□□□□ -1.75
CPSF6-207ENST00000551516 WWC1Q8IX03 1113 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 NECTIN2Q92692 538 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 STAC3Q96MF2 364 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 ARID3AQ99856 593 aa4.14□□□□□ -1.75
CPSF6-207ENST00000551516 RAPGEF2Q9Y4G8 1499 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 TK2O00142 265 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 AP1G2O75843 785 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 QPCTQ16769 361 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 KMT5BQ4FZB7 885 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 SAMD7Q7Z3H4 446 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 MRPL50Q8N5N7 158 aaKnown RBP4.13□□□□□ -1.75
CPSF6-207ENST00000551516 MARVELD3Q96A59 401 aa4.13□□□□□ -1.75
CPSF6-207ENST00000551516 FAM163AQ96GL9 167 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms