RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 ATRNO75882 1429 aa16.73■□□□□ 0.27
PFDN5-212ENST00000550880 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
PFDN5-212ENST00000550880 LRPPRCP42704 1394 aaKnown RBP16.73■□□□□ 0.27
PFDN5-212ENST00000550880 PRAG1Q86YV5 1406 aa16.71■□□□□ 0.27
PFDN5-212ENST00000550880 GJD4Q96KN9 370 aaPredicted RBP16.71■□□□□ 0.27
PFDN5-212ENST00000550880 FOXO3O43524 673 aa16.7■□□□□ 0.26
PFDN5-212ENST00000550880 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
PFDN5-212ENST00000550880 COL22A1Q8NFW1 1626 aaPredicted RBP16.69■□□□□ 0.26
PFDN5-212ENST00000550880 MYOM2P54296 1465 aa16.68■□□□□ 0.26
PFDN5-212ENST00000550880 BCL9LQ86UU0 1499 aa16.67■□□□□ 0.26
PFDN5-212ENST00000550880 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
PFDN5-212ENST00000550880 XPCQ01831 940 aaPredicted RBP16.67■□□□□ 0.26
PFDN5-212ENST00000550880 NAIPQ13075 1403 aa16.67■□□□□ 0.26
PFDN5-212ENST00000550880 UNC5CLQ8IV45 518 aa16.66■□□□□ 0.26
PFDN5-212ENST00000550880 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
PFDN5-212ENST00000550880 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
PFDN5-212ENST00000550880 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
PFDN5-212ENST00000550880 STK26Q9P289 416 aa16.65■□□□□ 0.26
PFDN5-212ENST00000550880 PXDNQ92626 1479 aa16.65■□□□□ 0.26
PFDN5-212ENST00000550880 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
PFDN5-212ENST00000550880 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
PFDN5-212ENST00000550880 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
PFDN5-212ENST00000550880 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
PFDN5-212ENST00000550880 PPLO60437 1756 aa16.6■□□□□ 0.25
PFDN5-212ENST00000550880 PSME1Q06323 249 aa16.6■□□□□ 0.25
PFDN5-212ENST00000550880 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
PFDN5-212ENST00000550880 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
PFDN5-212ENST00000550880 SPATA31A3Q5VYP0 1347 aa16.6■□□□□ 0.25
PFDN5-212ENST00000550880 ADGRF5Q8IZF2 1346 aa16.6■□□□□ 0.25
PFDN5-212ENST00000550880 ABCC11Q96J66 1382 aa16.59■□□□□ 0.25
PFDN5-212ENST00000550880 ANKRD30BQ9BXX2 1392 aa16.59■□□□□ 0.25
PFDN5-212ENST00000550880 CCDC144AA2RUR9 1427 aa16.59■□□□□ 0.25
PFDN5-212ENST00000550880 RALGAPBQ86X10 1494 aa16.59■□□□□ 0.25
PFDN5-212ENST00000550880 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
PFDN5-212ENST00000550880 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
PFDN5-212ENST00000550880 TECPR2O15040 1411 aa16.58■□□□□ 0.24
PFDN5-212ENST00000550880 EP400Q96L91 3159 aa16.57■□□□□ 0.24
PFDN5-212ENST00000550880 SLIT2O94813 1529 aa16.57■□□□□ 0.24
PFDN5-212ENST00000550880 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
PFDN5-212ENST00000550880 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
PFDN5-212ENST00000550880 VPS72Q15906 364 aa16.56■□□□□ 0.24
PFDN5-212ENST00000550880 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
PFDN5-212ENST00000550880 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
PFDN5-212ENST00000550880 LMOD2Q6P5Q4 547 aa16.54■□□□□ 0.24
PFDN5-212ENST00000550880 SIRT1Q96EB6 747 aa16.54■□□□□ 0.24
PFDN5-212ENST00000550880 PHF8Q9UPP1 1060 aa16.54■□□□□ 0.24
PFDN5-212ENST00000550880 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
PFDN5-212ENST00000550880 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
PFDN5-212ENST00000550880 A0A0G2JS52 829 aa16.53■□□□□ 0.24
PFDN5-212ENST00000550880 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
PFDN5-212ENST00000550880 MYT1Q01538 1121 aa16.53■□□□□ 0.24
PFDN5-212ENST00000550880 KRT27Q7Z3Y8 459 aa16.53■□□□□ 0.24
PFDN5-212ENST00000550880 GLI3P10071 1580 aa16.52■□□□□ 0.24
PFDN5-212ENST00000550880 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.23
PFDN5-212ENST00000550880 YTHDC2Q9H6S0 1430 aaKnown RBP16.52■□□□□ 0.23
PFDN5-212ENST00000550880 USP32Q8NFA0 1604 aa16.52■□□□□ 0.23
PFDN5-212ENST00000550880 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
PFDN5-212ENST00000550880 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
PFDN5-212ENST00000550880 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
PFDN5-212ENST00000550880 BAG6P46379 1132 aa16.5■□□□□ 0.23
PFDN5-212ENST00000550880 SPATA31E1Q6ZUB1 1445 aa16.5■□□□□ 0.23
PFDN5-212ENST00000550880 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
PFDN5-212ENST00000550880 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
PFDN5-212ENST00000550880 PIK3C2GO75747 1445 aa16.49■□□□□ 0.23
PFDN5-212ENST00000550880 MPHOSPH9Q99550 1183 aa16.49■□□□□ 0.23
PFDN5-212ENST00000550880 DHX57Q6P158 1386 aaKnown RBP16.49■□□□□ 0.23
PFDN5-212ENST00000550880 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
PFDN5-212ENST00000550880 C14orf93Q9H972 538 aaKnown RBP16.48■□□□□ 0.23
PFDN5-212ENST00000550880 POGKQ9P215 609 aa16.47■□□□□ 0.23
PFDN5-212ENST00000550880 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
PFDN5-212ENST00000550880 PRAM1Q96QH2 718 aa16.46■□□□□ 0.23
PFDN5-212ENST00000550880 BRWD3Q6RI45 1802 aa16.45■□□□□ 0.22
PFDN5-212ENST00000550880 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
PFDN5-212ENST00000550880 NRXN1Q9ULB1 1477 aa16.45■□□□□ 0.22
PFDN5-212ENST00000550880 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
PFDN5-212ENST00000550880 FAM98CQ17RN3 349 aaKnown RBP16.44■□□□□ 0.22
PFDN5-212ENST00000550880 PMFBP1Q8TBY8 1022 aa16.44■□□□□ 0.22
PFDN5-212ENST00000550880 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
PFDN5-212ENST00000550880 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
PFDN5-212ENST00000550880 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
PFDN5-212ENST00000550880 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
PFDN5-212ENST00000550880 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
PFDN5-212ENST00000550880 GPRASP1Q5JY77 1395 aa16.42■□□□□ 0.22
PFDN5-212ENST00000550880 PLCH1Q4KWH8 1693 aa16.41■□□□□ 0.22
PFDN5-212ENST00000550880 HRCP23327 699 aa16.41■□□□□ 0.22
PFDN5-212ENST00000550880 ANKARQ7Z5J8 1434 aa16.41■□□□□ 0.22
PFDN5-212ENST00000550880 LRP5O75197 1615 aa16.41■□□□□ 0.22
PFDN5-212ENST00000550880 EIF3AQ14152 1382 aaKnown RBP16.39■□□□□ 0.21
PFDN5-212ENST00000550880 RGPD8O14715 1765 aaPredicted RBP16.39■□□□□ 0.21
PFDN5-212ENST00000550880 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.21
PFDN5-212ENST00000550880 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
PFDN5-212ENST00000550880 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
PFDN5-212ENST00000550880 SPATA31A5Q5VU36 1347 aa16.36■□□□□ 0.21
PFDN5-212ENST00000550880 SPATA31A7Q8IWB4 1347 aa16.36■□□□□ 0.21
PFDN5-212ENST00000550880 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
PFDN5-212ENST00000550880 R3HDM1Q15032 1099 aaKnown RBP16.35■□□□□ 0.21
PFDN5-212ENST00000550880 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
PFDN5-212ENST00000550880 PRDM11Q9NQV5 511 aa16.35■□□□□ 0.21
PFDN5-212ENST00000550880 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
PFDN5-212ENST00000550880 ABCA3Q99758 1704 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms