RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
TROAP-213ENST00000550709 HIRIP3Q9BW71 556 aaPredicted RBP19.64■□□□□ 0.73
TROAP-213ENST00000550709 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.64■□□□□ 0.73
TROAP-213ENST00000550709 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
TROAP-213ENST00000550709 BRINP3Q76B58 766 aa19.63■□□□□ 0.73
TROAP-213ENST00000550709 MST1RQ04912 1400 aa19.62■□□□□ 0.73
TROAP-213ENST00000550709 ROCK2O75116 1388 aaKnown RBP19.62■□□□□ 0.73
TROAP-213ENST00000550709 ORAI2Q96SN7 254 aa19.61■□□□□ 0.73
TROAP-213ENST00000550709 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
TROAP-213ENST00000550709 C1orf167Q5SNV9 1468 aa19.59■□□□□ 0.73
TROAP-213ENST00000550709 NALCNQ8IZF0 1738 aa19.59■□□□□ 0.73
TROAP-213ENST00000550709 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
TROAP-213ENST00000550709 DDX17Q92841 729 aaKnown RBP19.58■□□□□ 0.72
TROAP-213ENST00000550709 KNDC1Q76NI1 1749 aa19.57■□□□□ 0.72
TROAP-213ENST00000550709 CARD11Q9BXL7 1154 aa19.57■□□□□ 0.72
TROAP-213ENST00000550709 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
TROAP-213ENST00000550709 CENPJQ9HC77 1338 aaPredicted RBP19.54■□□□□ 0.72
TROAP-213ENST00000550709 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
TROAP-213ENST00000550709 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
TROAP-213ENST00000550709 KIAA1210Q9ULL0 1709 aa19.53■□□□□ 0.72
TROAP-213ENST00000550709 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
TROAP-213ENST00000550709 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
TROAP-213ENST00000550709 FOXO3O43524 673 aa19.5■□□□□ 0.71
TROAP-213ENST00000550709 CDK19Q9BWU1 502 aa19.5■□□□□ 0.71
TROAP-213ENST00000550709 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
TROAP-213ENST00000550709 TRPM1Q7Z4N2 1603 aa19.49■□□□□ 0.71
TROAP-213ENST00000550709 RALGAPBQ86X10 1494 aa19.48■□□□□ 0.71
TROAP-213ENST00000550709 PHF8Q9UPP1 1060 aa19.48■□□□□ 0.71
TROAP-213ENST00000550709 PRR36Q9H6K5 1346 aa19.48■□□□□ 0.71
TROAP-213ENST00000550709 PMFBP1Q8TBY8 1022 aa19.47■□□□□ 0.71
TROAP-213ENST00000550709 EIF3AQ14152 1382 aaKnown RBP19.46■□□□□ 0.71
TROAP-213ENST00000550709 SRPK2P78362 688 aaKnown RBP19.46■□□□□ 0.71
TROAP-213ENST00000550709 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
TROAP-213ENST00000550709 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
TROAP-213ENST00000550709 NPHP3Q7Z494 1330 aa19.45■□□□□ 0.7
TROAP-213ENST00000550709 ARHGEF28Q8N1W1 1705 aaKnown RBP19.45■□□□□ 0.7
TROAP-213ENST00000550709 LRRC59Q96AG4 307 aaKnown RBP19.44■□□□□ 0.7
TROAP-213ENST00000550709 JCADQ9P266 1359 aa19.44■□□□□ 0.7
TROAP-213ENST00000550709 AHDC1Q5TGY3 1603 aaPredicted RBP19.43■□□□□ 0.7
TROAP-213ENST00000550709 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
TROAP-213ENST00000550709 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
TROAP-213ENST00000550709 SOS2Q07890 1332 aaPredicted RBP19.42■□□□□ 0.7
TROAP-213ENST00000550709 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
TROAP-213ENST00000550709 PSME1Q06323 249 aa19.41■□□□□ 0.7
TROAP-213ENST00000550709 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
TROAP-213ENST00000550709 FMN2Q9NZ56 1722 aa19.41■□□□□ 0.7
TROAP-213ENST00000550709 EVC2Q86UK5 1308 aa19.41■□□□□ 0.7
TROAP-213ENST00000550709 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
TROAP-213ENST00000550709 NUTM2BA6NNL0 878 aaPredicted RBP19.4■□□□□ 0.7
TROAP-213ENST00000550709 NUTM2EB1AL46 878 aaPredicted RBP19.4■□□□□ 0.7
TROAP-213ENST00000550709 NUTM2AQ8IVF1 878 aaPredicted RBP19.4■□□□□ 0.7
TROAP-213ENST00000550709 NGDNQ8NEJ9 315 aaKnown RBP19.4■□□□□ 0.7
TROAP-213ENST00000550709 TULP4Q9NRJ4 1543 aa19.4■□□□□ 0.7
TROAP-213ENST00000550709 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
TROAP-213ENST00000550709 COL16A1Q07092 1604 aaPredicted RBP19.39■□□□□ 0.69
TROAP-213ENST00000550709 DISP3Q9P2K9 1392 aa19.37■□□□□ 0.69
TROAP-213ENST00000550709 USP47Q96K76 1375 aa19.36■□□□□ 0.69
TROAP-213ENST00000550709 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
TROAP-213ENST00000550709 LMOD2Q6P5Q4 547 aa19.36■□□□□ 0.69
TROAP-213ENST00000550709 ATP7BP35670 1465 aa19.35■□□□□ 0.69
TROAP-213ENST00000550709 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
TROAP-213ENST00000550709 SPATA31A6Q5VVP1 1343 aa19.34■□□□□ 0.69
TROAP-213ENST00000550709 NHSL1Q5SYE7 1610 aa19.34■□□□□ 0.69
TROAP-213ENST00000550709 USP32Q8NFA0 1604 aa19.34■□□□□ 0.69
TROAP-213ENST00000550709 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
TROAP-213ENST00000550709 CABP1Q9NZU7 370 aa19.34■□□□□ 0.69
TROAP-213ENST00000550709 PXDNQ92626 1479 aa19.34■□□□□ 0.69
TROAP-213ENST00000550709 ACEP12821 1306 aa19.33■□□□□ 0.69
TROAP-213ENST00000550709 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
TROAP-213ENST00000550709 MEX3CQ5U5Q3 659 aaKnown RBP19.33■□□□□ 0.68
TROAP-213ENST00000550709 TESK2Q96S53 571 aa19.33■□□□□ 0.68
TROAP-213ENST00000550709 QRICH2Q9H0J4 1663 aa19.33■□□□□ 0.68
TROAP-213ENST00000550709 SPATA31A3Q5VYP0 1347 aa19.32■□□□□ 0.68
TROAP-213ENST00000550709 PAK3O75914 559 aaPredicted RBP19.32■□□□□ 0.68
TROAP-213ENST00000550709 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
TROAP-213ENST00000550709 SBNO2Q9Y2G9 1366 aa19.31■□□□□ 0.68
TROAP-213ENST00000550709 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
TROAP-213ENST00000550709 MED1Q15648 1581 aaPredicted RBP19.3■□□□□ 0.68
TROAP-213ENST00000550709 RGPD8O14715 1765 aaPredicted RBP19.29■□□□□ 0.68
TROAP-213ENST00000550709 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
TROAP-213ENST00000550709 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
TROAP-213ENST00000550709 SBNO1A3KN83 1393 aa19.28■□□□□ 0.68
TROAP-213ENST00000550709 ATAD2Q6PL18 1390 aa19.27■□□□□ 0.68
TROAP-213ENST00000550709 LRP6O75581 1613 aa19.26■□□□□ 0.67
TROAP-213ENST00000550709 EIF4G2P78344 907 aaKnown RBP eCLIP19.26■□□□□ 0.67
TROAP-213ENST00000550709 CABLES1Q8TDN4 633 aa19.26■□□□□ 0.67
TROAP-213ENST00000550709 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
TROAP-213ENST00000550709 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
TROAP-213ENST00000550709 SLC24A1O60721 1099 aa19.25■□□□□ 0.67
TROAP-213ENST00000550709 HSPA5P11021 654 aaKnown RBP19.25■□□□□ 0.67
TROAP-213ENST00000550709 HAP1P54257 671 aaPredicted RBP19.25■□□□□ 0.67
TROAP-213ENST00000550709 TMF1P82094 1093 aa19.25■□□□□ 0.67
TROAP-213ENST00000550709 NUTM2GQ5VZR2 741 aa19.25■□□□□ 0.67
TROAP-213ENST00000550709 C8orf37Q96NL8 207 aa19.24■□□□□ 0.67
TROAP-213ENST00000550709 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
TROAP-213ENST00000550709 ARHGEF10O15013 1369 aa19.23■□□□□ 0.67
TROAP-213ENST00000550709 SHPRHQ149N8 1683 aa19.22■□□□□ 0.67
TROAP-213ENST00000550709 RGS17Q9UGC6 210 aaPredicted RBP19.22■□□□□ 0.67
TROAP-213ENST00000550709 NGLY1Q96IV0 654 aa19.21■□□□□ 0.67
TROAP-213ENST00000550709 ABTB2Q8N961 1025 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms