RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 REREQ9P2R6 1566 aa9.45□□□□□ -0.9
DEPDC4-209ENST00000550587 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
DEPDC4-209ENST00000550587 TRIM26Q12899 539 aaPredicted RBP9.44□□□□□ -0.9
DEPDC4-209ENST00000550587 KCTD12Q96CX2 325 aaKnown RBP9.44□□□□□ -0.9
DEPDC4-209ENST00000550587 CFDP1Q9UEE9 299 aaPredicted RBP9.44□□□□□ -0.9
DEPDC4-209ENST00000550587 AGLP35573 1532 aa9.44□□□□□ -0.9
DEPDC4-209ENST00000550587 DIP2CQ9Y2E4 1556 aa9.44□□□□□ -0.9
DEPDC4-209ENST00000550587 PREX2Q70Z35 1606 aa9.44□□□□□ -0.9
DEPDC4-209ENST00000550587 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
DEPDC4-209ENST00000550587 STAC3Q96MF2 364 aa9.43□□□□□ -0.9
DEPDC4-209ENST00000550587 ABCC1P33527 1531 aa9.42□□□□□ -0.9
DEPDC4-209ENST00000550587 PLEKHH2Q8IVE3 1493 aa9.42□□□□□ -0.9
DEPDC4-209ENST00000550587 PTPRTO14522 1441 aa9.42□□□□□ -0.9
DEPDC4-209ENST00000550587 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
DEPDC4-209ENST00000550587 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
DEPDC4-209ENST00000550587 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
DEPDC4-209ENST00000550587 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
DEPDC4-209ENST00000550587 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
DEPDC4-209ENST00000550587 MTUS2Q5JR59 1369 aa9.41□□□□□ -0.9
DEPDC4-209ENST00000550587 PTPREP23469 700 aa9.41□□□□□ -0.9
DEPDC4-209ENST00000550587 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
DEPDC4-209ENST00000550587 LRRIQ1Q96JM4 1722 aa9.41□□□□□ -0.9
DEPDC4-209ENST00000550587 C3P01024 1663 aa9.41□□□□□ -0.9
DEPDC4-209ENST00000550587 ABCA6Q8N139 1617 aa9.41□□□□□ -0.9
DEPDC4-209ENST00000550587 ZMYM3Q14202 1370 aa9.4□□□□□ -0.9
DEPDC4-209ENST00000550587 GGT6Q6P531 493 aa9.4□□□□□ -0.9
DEPDC4-209ENST00000550587 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.9
DEPDC4-209ENST00000550587 NPATQ14207 1427 aa9.39□□□□□ -0.91
DEPDC4-209ENST00000550587 STRCQ7RTU9 1775 aa9.39□□□□□ -0.91
DEPDC4-209ENST00000550587 KIDINS220Q9ULH0 1771 aa9.39□□□□□ -0.91
DEPDC4-209ENST00000550587 LRRC9Q6ZRR7 1453 aa9.39□□□□□ -0.91
DEPDC4-209ENST00000550587 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
DEPDC4-209ENST00000550587 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
DEPDC4-209ENST00000550587 SAMD9LQ8IVG5 1584 aa9.38□□□□□ -0.91
DEPDC4-209ENST00000550587 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
DEPDC4-209ENST00000550587 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
DEPDC4-209ENST00000550587 SYCP2Q9BX26 1530 aa9.37□□□□□ -0.91
DEPDC4-209ENST00000550587 GPATCH8Q9UKJ3 1502 aaKnown RBP9.37□□□□□ -0.91
DEPDC4-209ENST00000550587 PCGF6Q9BYE7 350 aa9.37□□□□□ -0.91
DEPDC4-209ENST00000550587 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
DEPDC4-209ENST00000550587 MROH2AA6NES4 1674 aa9.36□□□□□ -0.91
DEPDC4-209ENST00000550587 A2MP01023 1474 aa9.36□□□□□ -0.91
DEPDC4-209ENST00000550587 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
DEPDC4-209ENST00000550587 RSPH4AQ5TD94 716 aa9.36□□□□□ -0.91
DEPDC4-209ENST00000550587 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
DEPDC4-209ENST00000550587 ATP7AQ04656 1500 aa9.36□□□□□ -0.91
DEPDC4-209ENST00000550587 IQSEC2Q5JU85 1478 aa9.35□□□□□ -0.91
DEPDC4-209ENST00000550587 PTPN5P54829 565 aa9.35□□□□□ -0.91
DEPDC4-209ENST00000550587 NCOA1Q15788 1441 aa9.35□□□□□ -0.91
DEPDC4-209ENST00000550587 CAMSAP1Q5T5Y3 1602 aa9.34□□□□□ -0.91
DEPDC4-209ENST00000550587 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
DEPDC4-209ENST00000550587 UBAP1LF5GYI3 381 aa9.33□□□□□ -0.92
DEPDC4-209ENST00000550587 TSPY4P0CV99 314 aa9.33□□□□□ -0.92
DEPDC4-209ENST00000550587 TSPY10P0CW01 314 aa9.33□□□□□ -0.92
DEPDC4-209ENST00000550587 CLTCQ00610 1675 aaKnown RBP9.32□□□□□ -0.92
DEPDC4-209ENST00000550587 KIF3BO15066 747 aa9.32□□□□□ -0.92
DEPDC4-209ENST00000550587 CAMK2BQ13554 666 aa9.32□□□□□ -0.92
DEPDC4-209ENST00000550587 ADGBQ8N7X0 1667 aa9.32□□□□□ -0.92
DEPDC4-209ENST00000550587 WASHC2CQ9Y4E1 1318 aa9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 RTEL1-TNFRSF6BF6WH68 1400 aa9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 EHBP1L1Q8N3D4 1523 aa9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 DPYSL4O14531 572 aa9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 COL9A1P20849 921 aa9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 MRPL50Q8N5N7 158 aaKnown RBP9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 PLA2R1Q13018 1463 aa9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 PTPRKQ15262 1439 aa9.31□□□□□ -0.92
DEPDC4-209ENST00000550587 INO80Q9ULG1 1556 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 DHX29Q7Z478 1369 aaKnown RBP9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 PPP1R3GB7ZBB8 358 aa9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 PHF14O94880 888 aa9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 PROX2Q3B8N5 592 aa9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 ANKLE2Q86XL3 938 aa9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 THEMISQ8N1K5 641 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 LTBP4Q8N2S1 1624 aa9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 ZNF335Q9H4Z2 1342 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
DEPDC4-209ENST00000550587 PLXNC1O60486 1568 aa9.29□□□□□ -0.92
DEPDC4-209ENST00000550587 TOM1O60784 492 aa9.29□□□□□ -0.92
DEPDC4-209ENST00000550587 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
DEPDC4-209ENST00000550587 THSD4Q6ZMP0 1018 aa9.29□□□□□ -0.92
DEPDC4-209ENST00000550587 WNT2BQ93097 391 aa9.29□□□□□ -0.92
DEPDC4-209ENST00000550587 RRBP1Q9P2E9 1410 aaKnown RBP9.29□□□□□ -0.92
DEPDC4-209ENST00000550587 CEP170BQ9Y4F5 1589 aaPredicted RBP9.29□□□□□ -0.92
DEPDC4-209ENST00000550587 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
DEPDC4-209ENST00000550587 MYO3AQ8NEV4 1616 aa9.28□□□□□ -0.92
DEPDC4-209ENST00000550587 ZNF142P52746 1687 aaPredicted RBP9.28□□□□□ -0.92
DEPDC4-209ENST00000550587 A2ML1A8K2U0 1454 aa9.28□□□□□ -0.92
DEPDC4-209ENST00000550587 FBXW7Q969H0 707 aa9.27□□□□□ -0.93
DEPDC4-209ENST00000550587 CCDC141Q6ZP82 1450 aa9.27□□□□□ -0.93
DEPDC4-209ENST00000550587 TNRQ92752 1358 aa9.26□□□□□ -0.93
DEPDC4-209ENST00000550587 NBPF3Q9H094 633 aa9.26□□□□□ -0.93
DEPDC4-209ENST00000550587 TCOF1Q13428 1488 aaKnown RBP9.26□□□□□ -0.93
DEPDC4-209ENST00000550587 MBD5Q9P267 1494 aa9.26□□□□□ -0.93
DEPDC4-209ENST00000550587 FAM135AQ9P2D6 1515 aa9.26□□□□□ -0.93
DEPDC4-209ENST00000550587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.25□□□□□ -0.93
DEPDC4-209ENST00000550587 MYOM3Q5VTT5 1437 aa9.25□□□□□ -0.93
DEPDC4-209ENST00000550587 PIP4K2BP78356 416 aa9.25□□□□□ -0.93
DEPDC4-209ENST00000550587 FBXO31Q5XUX0 539 aaPredicted RBP9.25□□□□□ -0.93
DEPDC4-209ENST00000550587 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms