RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NPC1L1Q9UHC9 1359 aa27.98■■■□□ 2.07
PRDM4-205ENST00000550376 PTPRMP28827 1452 aa27.98■■■□□ 2.07
PRDM4-205ENST00000550376 MORC1Q86VD1 984 aa27.98■■■□□ 2.07
PRDM4-205ENST00000550376 CCDC146Q8IYE0 955 aa27.98■■■□□ 2.07
PRDM4-205ENST00000550376 TNRQ92752 1358 aa27.98■■■□□ 2.07
PRDM4-205ENST00000550376 PLEKHH1Q9ULM0 1364 aa27.96■■■□□ 2.07
PRDM4-205ENST00000550376 CDK19Q9BWU1 502 aa27.94■■■□□ 2.06
PRDM4-205ENST00000550376 TXNDC2Q86VQ3 553 aa27.93■■■□□ 2.06
PRDM4-205ENST00000550376 METP08581 1390 aa27.93■■■□□ 2.06
PRDM4-205ENST00000550376 BLMP54132 1417 aaPredicted RBP27.92■■■□□ 2.06
PRDM4-205ENST00000550376 CGNL1Q0VF96 1302 aa27.88■■■□□ 2.05
PRDM4-205ENST00000550376 CABP1Q9NZU7 370 aa27.88■■■□□ 2.05
PRDM4-205ENST00000550376 LTKP29376 864 aa27.87■■■□□ 2.05
PRDM4-205ENST00000550376 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.87■■■□□ 2.05
PRDM4-205ENST00000550376 A0A1W2PP64 1363 aa27.87■■■□□ 2.05
PRDM4-205ENST00000550376 ANKRD36BQ8N2N9 1353 aa27.86■■■□□ 2.05
PRDM4-205ENST00000550376 GGNBP2Q9H3C7 697 aa27.86■■■□□ 2.05
PRDM4-205ENST00000550376 PUS7Q96PZ0 661 aaKnown RBP27.85■■■□□ 2.05
PRDM4-205ENST00000550376 B4GALNT3Q6L9W6 998 aa27.84■■■□□ 2.05
PRDM4-205ENST00000550376 MTHFSP49914 203 aa27.84■■■□□ 2.05
PRDM4-205ENST00000550376 TMEM2Q9UHN6 1383 aa27.83■■■□□ 2.05
PRDM4-205ENST00000550376 APAF1O14727 1248 aa27.82■■■□□ 2.04
PRDM4-205ENST00000550376 SLC26A8Q96RN1 970 aa27.82■■■□□ 2.04
PRDM4-205ENST00000550376 NCKAP5LQ9HCH0 1330 aa27.81■■■□□ 2.04
PRDM4-205ENST00000550376 HDGFP51858 240 aaKnown RBP27.8■■■□□ 2.04
PRDM4-205ENST00000550376 NRXN3Q9Y4C0 1643 aa27.79■■■□□ 2.04
PRDM4-205ENST00000550376 RCAN3Q9UKA8 241 aa27.79■■■□□ 2.04
PRDM4-205ENST00000550376 PDE3BQ13370 1112 aa27.78■■■□□ 2.04
PRDM4-205ENST00000550376 PPP4R2Q9NY27 417 aa27.78■■■□□ 2.04
PRDM4-205ENST00000550376 ABCC11Q96J66 1382 aa27.78■■■□□ 2.04
PRDM4-205ENST00000550376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.77■■■□□ 2.04
PRDM4-205ENST00000550376 TERF2IPQ9NYB0 399 aa27.77■■■□□ 2.04
PRDM4-205ENST00000550376 ATAD2Q6PL18 1390 aa27.77■■■□□ 2.04
PRDM4-205ENST00000550376 TSHZ2Q9NRE2 1034 aa27.77■■■□□ 2.04
PRDM4-205ENST00000550376 RNF123Q5XPI4 1314 aa27.76■■■□□ 2.04
PRDM4-205ENST00000550376 FYB1O15117 783 aa27.76■■■□□ 2.03
PRDM4-205ENST00000550376 FBLN1P23142 703 aa27.75■■■□□ 2.03
PRDM4-205ENST00000550376 SETD1AO15047 1707 aaKnown RBP27.75■■■□□ 2.03
PRDM4-205ENST00000550376 INSRP06213 1382 aa27.75■■■□□ 2.03
PRDM4-205ENST00000550376 CD163L1Q9NR16 1453 aa27.74■■■□□ 2.03
PRDM4-205ENST00000550376 NUTM2FA1L443 756 aa27.73■■■□□ 2.03
PRDM4-205ENST00000550376 NEUROD2Q15784 382 aa27.73■■■□□ 2.03
PRDM4-205ENST00000550376 UBR1Q8IWV7 1749 aa27.73■■■□□ 2.03
PRDM4-205ENST00000550376 POLR3AO14802 1390 aaPredicted RBP27.72■■■□□ 2.03
PRDM4-205ENST00000550376 PLIN1O60240 522 aa27.72■■■□□ 2.03
PRDM4-205ENST00000550376 HDGFL2Q7Z4V5 671 aaPredicted RBP27.72■■■□□ 2.03
PRDM4-205ENST00000550376 WASLO00401 505 aaPredicted RBP27.71■■■□□ 2.03
PRDM4-205ENST00000550376 SPINK5Q9NQ38 1064 aaPredicted RBP27.71■■■□□ 2.03
PRDM4-205ENST00000550376 RRP7AQ9Y3A4 280 aaKnown RBP27.71■■■□□ 2.03
PRDM4-205ENST00000550376 DMRT2Q9Y5R5 561 aa27.7■■■□□ 2.02
PRDM4-205ENST00000550376 RRP1P56182 461 aaKnown RBP27.69■■■□□ 2.02
PRDM4-205ENST00000550376 ERICH6BQ5W0A0 696 aa27.69■■■□□ 2.02
PRDM4-205ENST00000550376 ROBO2Q9HCK4 1378 aa27.68■■■□□ 2.02
PRDM4-205ENST00000550376 ADAMTS13Q76LX8 1427 aa27.68■■■□□ 2.02
PRDM4-205ENST00000550376 ZNF521Q96K83 1311 aa27.67■■■□□ 2.02
PRDM4-205ENST00000550376 EID1Q9Y6B2 187 aa27.67■■■□□ 2.02
PRDM4-205ENST00000550376 NINLQ9Y2I6 1382 aa27.67■■■□□ 2.02
PRDM4-205ENST00000550376 GOLGA2Q08379 1002 aa27.66■■■□□ 2.02
PRDM4-205ENST00000550376 C3P01024 1663 aa27.66■■■□□ 2.02
PRDM4-205ENST00000550376 DLC1Q96QB1 1528 aa27.66■■■□□ 2.02
PRDM4-205ENST00000550376 DUSP27Q5VZP5 1158 aa27.65■■■□□ 2.02
PRDM4-205ENST00000550376 NUDT16Q96DE0 195 aaKnown RBP27.65■■■□□ 2.02
PRDM4-205ENST00000550376 ZRANB1Q9UGI0 708 aa27.64■■■□□ 2.02
PRDM4-205ENST00000550376 CFAP53Q96M91 514 aa27.63■■■□□ 2.01
PRDM4-205ENST00000550376 NLRP1Q9C000 1473 aa27.63■■■□□ 2.01
PRDM4-205ENST00000550376 U2AF1L5P0DN76 240 aaPredicted RBP27.63■■■□□ 2.01
PRDM4-205ENST00000550376 U2AF1Q01081 240 aaKnown RBP eCLIP27.63■■■□□ 2.01
PRDM4-205ENST00000550376 USP32Q8NFA0 1604 aa27.62■■■□□ 2.01
PRDM4-205ENST00000550376 PPM1GO15355 546 aaPredicted RBP27.62■■■□□ 2.01
PRDM4-205ENST00000550376 NSD2O96028 1365 aa27.62■■■□□ 2.01
PRDM4-205ENST00000550376 EXOC6Q8TAG9 804 aa27.61■■■□□ 2.01
PRDM4-205ENST00000550376 FER1L4A9Z1Z3 1794 aa27.61■■■□□ 2.01
PRDM4-205ENST00000550376 PPIP5K1Q6PFW1 1433 aa27.6■■■□□ 2.01
PRDM4-205ENST00000550376 U2SURPO15042 1029 aaKnown RBP27.6■■■□□ 2.01
PRDM4-205ENST00000550376 PLEKHG1Q9ULL1 1385 aa27.6■■■□□ 2.01
PRDM4-205ENST00000550376 SLFN5Q08AF3 891 aa27.59■■■□□ 2.01
PRDM4-205ENST00000550376 TCP11L2Q8N4U5 519 aa27.59■■■□□ 2.01
PRDM4-205ENST00000550376 PRR36Q9H6K5 1346 aa27.59■■■□□ 2.01
PRDM4-205ENST00000550376 NME9Q86XW9 330 aa27.58■■■□□ 2.01
PRDM4-205ENST00000550376 THEMISQ8N1K5 641 aaPredicted RBP27.58■■■□□ 2.01
PRDM4-205ENST00000550376 AMOTL2Q9Y2J4 779 aa27.58■■■□□ 2.01
PRDM4-205ENST00000550376 PTPRUQ92729 1446 aa27.57■■■□□ 2
PRDM4-205ENST00000550376 SHPRHQ149N8 1683 aa27.57■■■□□ 2
PRDM4-205ENST00000550376 CCDC136Q96JN2 1154 aa27.56■■■□□ 2
PRDM4-205ENST00000550376 CCDC61Q9Y6R9 512 aa27.56■■■□□ 2
PRDM4-205ENST00000550376 RUNDC1Q96C34 613 aa27.56■■■□□ 2
PRDM4-205ENST00000550376 WWC1Q8IX03 1113 aa27.55■■■□□ 2
PRDM4-205ENST00000550376 FAM135BQ49AJ0 1406 aa27.54■■■□□ 2
PRDM4-205ENST00000550376 C20orf194Q5TEA3 1177 aa27.54■■■□□ 2
PRDM4-205ENST00000550376 SIRT1Q96EB6 747 aa27.54■■■□□ 2
PRDM4-205ENST00000550376 TECPR2O15040 1411 aa27.53■■■□□ 2
PRDM4-205ENST00000550376 TRMT2AQ8IZ69 625 aaKnown RBP27.49■■□□□ 1.99
PRDM4-205ENST00000550376 POLKQ9UBT6 870 aa27.49■■□□□ 1.99
PRDM4-205ENST00000550376 DNAJC5Q9H3Z4 198 aa27.48■■□□□ 1.99
PRDM4-205ENST00000550376 CPSF1Q10570 1443 aaKnown RBP27.48■■□□□ 1.99
PRDM4-205ENST00000550376 RBM33Q96EV2 1170 aaKnown RBP27.48■■□□□ 1.99
PRDM4-205ENST00000550376 TBX22Q9Y458 520 aa27.48■■□□□ 1.99
PRDM4-205ENST00000550376 EMILIN1Q9Y6C2 1016 aa27.48■■□□□ 1.99
PRDM4-205ENST00000550376 CPS1P31327 1500 aa27.47■■□□□ 1.99
PRDM4-205ENST00000550376 MED14O60244 1454 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms