RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
CTDSP2-206ENST00000550144 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
CTDSP2-206ENST00000550144 AMOTL2Q9Y2J4 779 aa15.96■□□□□ 0.15
CTDSP2-206ENST00000550144 WAPLQ7Z5K2 1190 aa15.95■□□□□ 0.14
CTDSP2-206ENST00000550144 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
CTDSP2-206ENST00000550144 ROBO2Q9HCK4 1378 aa15.94■□□□□ 0.14
CTDSP2-206ENST00000550144 PLEKHH1Q9ULM0 1364 aa15.94■□□□□ 0.14
CTDSP2-206ENST00000550144 PTCH1Q13635 1447 aa15.94■□□□□ 0.14
CTDSP2-206ENST00000550144 XRN1Q8IZH2 1706 aaKnown RBP15.93■□□□□ 0.14
CTDSP2-206ENST00000550144 TULP4Q9NRJ4 1543 aa15.93■□□□□ 0.14
CTDSP2-206ENST00000550144 PUS7Q96PZ0 661 aaKnown RBP15.92■□□□□ 0.14
CTDSP2-206ENST00000550144 CHD2O14647 1828 aaKnown RBP15.9■□□□□ 0.14
CTDSP2-206ENST00000550144 KCNA6P17658 529 aa15.9■□□□□ 0.14
CTDSP2-206ENST00000550144 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
CTDSP2-206ENST00000550144 ANP32CO43423 234 aa15.88■□□□□ 0.13
CTDSP2-206ENST00000550144 MIER1Q8N108 512 aa15.88■□□□□ 0.13
CTDSP2-206ENST00000550144 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
CTDSP2-206ENST00000550144 MYOM1P52179 1685 aa15.87■□□□□ 0.13
CTDSP2-206ENST00000550144 CDK19Q9BWU1 502 aa15.87■□□□□ 0.13
CTDSP2-206ENST00000550144 WASLO00401 505 aaPredicted RBP15.86■□□□□ 0.13
CTDSP2-206ENST00000550144 PANK3Q9H999 370 aa15.86■□□□□ 0.13
CTDSP2-206ENST00000550144 ADGRB2O60241 1585 aa15.86■□□□□ 0.13
CTDSP2-206ENST00000550144 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
CTDSP2-206ENST00000550144 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
CTDSP2-206ENST00000550144 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
CTDSP2-206ENST00000550144 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
CTDSP2-206ENST00000550144 LTBP4Q8N2S1 1624 aa15.85■□□□□ 0.13
CTDSP2-206ENST00000550144 NINLQ9Y2I6 1382 aa15.84■□□□□ 0.13
CTDSP2-206ENST00000550144 NKTRP30414 1462 aaKnown RBP15.82■□□□□ 0.12
CTDSP2-206ENST00000550144 SLC12A5Q9H2X9 1139 aa15.81■□□□□ 0.12
CTDSP2-206ENST00000550144 PER1O15534 1290 aaPredicted RBP15.8■□□□□ 0.12
CTDSP2-206ENST00000550144 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
CTDSP2-206ENST00000550144 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
CTDSP2-206ENST00000550144 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
CTDSP2-206ENST00000550144 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
CTDSP2-206ENST00000550144 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.12
CTDSP2-206ENST00000550144 ANKRD36BQ8N2N9 1353 aa15.77■□□□□ 0.12
CTDSP2-206ENST00000550144 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
CTDSP2-206ENST00000550144 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.12
CTDSP2-206ENST00000550144 TERF2IPQ9NYB0 399 aa15.77■□□□□ 0.12
CTDSP2-206ENST00000550144 CABP1Q9NZU7 370 aa15.77■□□□□ 0.12
CTDSP2-206ENST00000550144 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
CTDSP2-206ENST00000550144 NALCNQ8IZF0 1738 aa15.77■□□□□ 0.11
CTDSP2-206ENST00000550144 ATP7BP35670 1465 aa15.76■□□□□ 0.11
CTDSP2-206ENST00000550144 PPIP5K1Q6PFW1 1433 aa15.76■□□□□ 0.11
CTDSP2-206ENST00000550144 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
CTDSP2-206ENST00000550144 CDC42BPGQ6DT37 1551 aa15.75■□□□□ 0.11
CTDSP2-206ENST00000550144 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
CTDSP2-206ENST00000550144 HDGFL2Q7Z4V5 671 aaPredicted RBP15.75■□□□□ 0.11
CTDSP2-206ENST00000550144 RBM33Q96EV2 1170 aaKnown RBP15.75■□□□□ 0.11
CTDSP2-206ENST00000550144 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
CTDSP2-206ENST00000550144 STRCP1A6NGW2 1772 aa15.75■□□□□ 0.11
CTDSP2-206ENST00000550144 ZNF335Q9H4Z2 1342 aaPredicted RBP15.74■□□□□ 0.11
CTDSP2-206ENST00000550144 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
CTDSP2-206ENST00000550144 ANKARQ7Z5J8 1434 aa15.74■□□□□ 0.11
CTDSP2-206ENST00000550144 NSD3Q9BZ95 1437 aa15.74■□□□□ 0.11
CTDSP2-206ENST00000550144 NCOA3Q9Y6Q9 1424 aa15.74■□□□□ 0.11
CTDSP2-206ENST00000550144 FMN2Q9NZ56 1722 aa15.74■□□□□ 0.11
CTDSP2-206ENST00000550144 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
CTDSP2-206ENST00000550144 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
CTDSP2-206ENST00000550144 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
CTDSP2-206ENST00000550144 RALBP1Q15311 655 aa15.73■□□□□ 0.11
CTDSP2-206ENST00000550144 NPC1L1Q9UHC9 1359 aa15.73■□□□□ 0.11
CTDSP2-206ENST00000550144 TOPAZ1Q8N9V7 1692 aa15.73■□□□□ 0.11
CTDSP2-206ENST00000550144 CD163L1Q9NR16 1453 aa15.72■□□□□ 0.11
CTDSP2-206ENST00000550144 AMER1Q5JTC6 1135 aaPredicted RBP15.72■□□□□ 0.11
CTDSP2-206ENST00000550144 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
CTDSP2-206ENST00000550144 TMEM94Q12767 1356 aa15.72■□□□□ 0.11
CTDSP2-206ENST00000550144 USP32Q8NFA0 1604 aa15.72■□□□□ 0.11
CTDSP2-206ENST00000550144 ITSN1Q15811 1721 aa15.71■□□□□ 0.11
CTDSP2-206ENST00000550144 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
CTDSP2-206ENST00000550144 PLEKHG3A1L390 1219 aa15.7■□□□□ 0.1
CTDSP2-206ENST00000550144 C19orf44Q9H6X5 657 aa15.7■□□□□ 0.1
CTDSP2-206ENST00000550144 PARD3Q8TEW0 1356 aa15.7■□□□□ 0.1
CTDSP2-206ENST00000550144 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
CTDSP2-206ENST00000550144 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
CTDSP2-206ENST00000550144 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
CTDSP2-206ENST00000550144 NSD2O96028 1365 aa15.67■□□□□ 0.1
CTDSP2-206ENST00000550144 LRRC7Q96NW7 1537 aa15.67■□□□□ 0.1
CTDSP2-206ENST00000550144 DCCP43146 1447 aa15.67■□□□□ 0.1
CTDSP2-206ENST00000550144 ATF3P18847 181 aa15.66■□□□□ 0.1
CTDSP2-206ENST00000550144 RGPD8O14715 1765 aaPredicted RBP15.66■□□□□ 0.1
CTDSP2-206ENST00000550144 AKAP12Q02952 1782 aa15.66■□□□□ 0.1
CTDSP2-206ENST00000550144 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
CTDSP2-206ENST00000550144 ACEP12821 1306 aa15.66■□□□□ 0.1
CTDSP2-206ENST00000550144 MSH6P52701 1360 aa15.65■□□□□ 0.1
CTDSP2-206ENST00000550144 MON2Q7Z3U7 1717 aa15.65■□□□□ 0.1
CTDSP2-206ENST00000550144 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
CTDSP2-206ENST00000550144 POLR3AO14802 1390 aaPredicted RBP15.64■□□□□ 0.09
CTDSP2-206ENST00000550144 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
CTDSP2-206ENST00000550144 PMFBP1Q8TBY8 1022 aa15.64■□□□□ 0.09
CTDSP2-206ENST00000550144 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
CTDSP2-206ENST00000550144 MORC1Q86VD1 984 aa15.63■□□□□ 0.09
CTDSP2-206ENST00000550144 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
CTDSP2-206ENST00000550144 XIRP1Q702N8 1843 aaKnown RBP15.63■□□□□ 0.09
CTDSP2-206ENST00000550144 USP6P35125 1406 aa15.62■□□□□ 0.09
CTDSP2-206ENST00000550144 ESCO1Q5FWF5 840 aa15.62■□□□□ 0.09
CTDSP2-206ENST00000550144 NLRP13Q86W25 1043 aa15.62■□□□□ 0.09
CTDSP2-206ENST00000550144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
CTDSP2-206ENST00000550144 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms