RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
UBE2N-203ENST00000549490 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.21
UBE2N-203ENST00000549490 UNC5CLQ8IV45 518 aa13.77□□□□□ -0.21
UBE2N-203ENST00000549490 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
UBE2N-203ENST00000549490 FOXO3O43524 673 aa13.76□□□□□ -0.21
UBE2N-203ENST00000549490 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
UBE2N-203ENST00000549490 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
UBE2N-203ENST00000549490 PXDNQ92626 1479 aa13.74□□□□□ -0.21
UBE2N-203ENST00000549490 SEPT12Q8IYM1 358 aa13.74□□□□□ -0.21
UBE2N-203ENST00000549490 PSDA5PKW4 1024 aaPredicted RBP13.73□□□□□ -0.21
UBE2N-203ENST00000549490 HRCP23327 699 aa13.73□□□□□ -0.21
UBE2N-203ENST00000549490 GLI3P10071 1580 aa13.73□□□□□ -0.21
UBE2N-203ENST00000549490 SLIT2O94813 1529 aa13.73□□□□□ -0.21
UBE2N-203ENST00000549490 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
UBE2N-203ENST00000549490 LRP5O75197 1615 aa13.72□□□□□ -0.21
UBE2N-203ENST00000549490 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
UBE2N-203ENST00000549490 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
UBE2N-203ENST00000549490 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
UBE2N-203ENST00000549490 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
UBE2N-203ENST00000549490 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
UBE2N-203ENST00000549490 VPS72Q15906 364 aa13.69□□□□□ -0.22
UBE2N-203ENST00000549490 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
UBE2N-203ENST00000549490 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
UBE2N-203ENST00000549490 ITGAEP38570 1179 aa13.68□□□□□ -0.22
UBE2N-203ENST00000549490 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
UBE2N-203ENST00000549490 BAG6P46379 1132 aa13.67□□□□□ -0.22
UBE2N-203ENST00000549490 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
UBE2N-203ENST00000549490 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
UBE2N-203ENST00000549490 CCDC9Q9Y3X0 531 aaKnown RBP13.66□□□□□ -0.22
UBE2N-203ENST00000549490 MARF1Q9Y4F3 1742 aaKnown RBP13.66□□□□□ -0.22
UBE2N-203ENST00000549490 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
UBE2N-203ENST00000549490 NAIPQ13075 1403 aa13.65□□□□□ -0.22
UBE2N-203ENST00000549490 KRT28Q7Z3Y7 464 aa13.65□□□□□ -0.22
UBE2N-203ENST00000549490 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
UBE2N-203ENST00000549490 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
UBE2N-203ENST00000549490 CABLES1Q8TDN4 633 aa13.64□□□□□ -0.23
UBE2N-203ENST00000549490 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
UBE2N-203ENST00000549490 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
UBE2N-203ENST00000549490 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
UBE2N-203ENST00000549490 R3HDM1Q15032 1099 aaKnown RBP13.63□□□□□ -0.23
UBE2N-203ENST00000549490 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
UBE2N-203ENST00000549490 STK26Q9P289 416 aa13.62□□□□□ -0.23
UBE2N-203ENST00000549490 A0A0G2JS52 829 aa13.61□□□□□ -0.23
UBE2N-203ENST00000549490 MYT1Q01538 1121 aa13.61□□□□□ -0.23
UBE2N-203ENST00000549490 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
UBE2N-203ENST00000549490 USP32Q8NFA0 1604 aa13.61□□□□□ -0.23
UBE2N-203ENST00000549490 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
UBE2N-203ENST00000549490 FAM98CQ17RN3 349 aaKnown RBP13.6□□□□□ -0.23
UBE2N-203ENST00000549490 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
UBE2N-203ENST00000549490 YY1P25490 414 aa13.59□□□□□ -0.23
UBE2N-203ENST00000549490 TNS3Q68CZ2 1445 aa13.58□□□□□ -0.24
UBE2N-203ENST00000549490 PSME1Q06323 249 aa13.58□□□□□ -0.24
UBE2N-203ENST00000549490 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
UBE2N-203ENST00000549490 ADGRF5Q8IZF2 1346 aa13.58□□□□□ -0.24
UBE2N-203ENST00000549490 TECPR2O15040 1411 aa13.57□□□□□ -0.24
UBE2N-203ENST00000549490 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
UBE2N-203ENST00000549490 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
UBE2N-203ENST00000549490 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
UBE2N-203ENST00000549490 KIF1BO60333 1816 aa13.56□□□□□ -0.24
UBE2N-203ENST00000549490 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
UBE2N-203ENST00000549490 TMEM132EQ6IEE7 984 aa13.56□□□□□ -0.24
UBE2N-203ENST00000549490 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
UBE2N-203ENST00000549490 BTG4Q9NY30 223 aa13.55□□□□□ -0.24
UBE2N-203ENST00000549490 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
UBE2N-203ENST00000549490 CAMKK2Q96RR4 588 aa13.54□□□□□ -0.24
UBE2N-203ENST00000549490 ARHGEF10O15013 1369 aa13.54□□□□□ -0.24
UBE2N-203ENST00000549490 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
UBE2N-203ENST00000549490 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
UBE2N-203ENST00000549490 PLCH1Q4KWH8 1693 aa13.53□□□□□ -0.24
UBE2N-203ENST00000549490 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
UBE2N-203ENST00000549490 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
UBE2N-203ENST00000549490 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
UBE2N-203ENST00000549490 RRBP1Q9P2E9 1410 aaKnown RBP13.51□□□□□ -0.25
UBE2N-203ENST00000549490 TRIM37O94972 964 aa13.5□□□□□ -0.25
UBE2N-203ENST00000549490 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
UBE2N-203ENST00000549490 SIRT1Q96EB6 747 aa13.5□□□□□ -0.25
UBE2N-203ENST00000549490 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
UBE2N-203ENST00000549490 PPLO60437 1756 aa13.5□□□□□ -0.25
UBE2N-203ENST00000549490 NRXN1Q9ULB1 1477 aa13.49□□□□□ -0.25
UBE2N-203ENST00000549490 YTHDC2Q9H6S0 1430 aaKnown RBP13.49□□□□□ -0.25
UBE2N-203ENST00000549490 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
UBE2N-203ENST00000549490 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
UBE2N-203ENST00000549490 APBA3O96018 575 aa13.48□□□□□ -0.25
UBE2N-203ENST00000549490 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
UBE2N-203ENST00000549490 FAM196AQ6ZSG2 479 aa13.47□□□□□ -0.25
UBE2N-203ENST00000549490 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
UBE2N-203ENST00000549490 NRAPQ86VF7 1730 aa13.47□□□□□ -0.25
UBE2N-203ENST00000549490 ABCA3Q99758 1704 aa13.46□□□□□ -0.25
UBE2N-203ENST00000549490 PARD3Q8TEW0 1356 aa13.45□□□□□ -0.26
UBE2N-203ENST00000549490 SAFB2Q14151 953 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBE2N-203ENST00000549490 PIK3C2GO75747 1445 aa13.45□□□□□ -0.26
UBE2N-203ENST00000549490 SPATA31E1Q6ZUB1 1445 aa13.45□□□□□ -0.26
UBE2N-203ENST00000549490 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
UBE2N-203ENST00000549490 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
UBE2N-203ENST00000549490 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
UBE2N-203ENST00000549490 C14orf93Q9H972 538 aaKnown RBP13.44□□□□□ -0.26
UBE2N-203ENST00000549490 PPP1R1BQ9UD71 204 aaPredicted RBP13.44□□□□□ -0.26
UBE2N-203ENST00000549490 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
UBE2N-203ENST00000549490 THSD7AQ9UPZ6 1657 aa13.44□□□□□ -0.26
UBE2N-203ENST00000549490 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms