RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 CDC42BPGQ6DT37 1551 aa28.81■■■□□ 2.2
SLC48A1-207ENST00000549243 MYOM2P54296 1465 aa28.8■■■□□ 2.2
SLC48A1-207ENST00000549243 YTHDC2Q9H6S0 1430 aaKnown RBP28.79■■■□□ 2.2
SLC48A1-207ENST00000549243 ABCC11Q96J66 1382 aa28.79■■■□□ 2.2
SLC48A1-207ENST00000549243 PLEKHH1Q9ULM0 1364 aa28.79■■■□□ 2.2
SLC48A1-207ENST00000549243 LAMC1P11047 1609 aa28.79■■■□□ 2.2
SLC48A1-207ENST00000549243 NRXN1Q9ULB1 1477 aa28.78■■■□□ 2.2
SLC48A1-207ENST00000549243 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
SLC48A1-207ENST00000549243 C14orf93Q9H972 538 aaKnown RBP28.77■■■□□ 2.2
SLC48A1-207ENST00000549243 PNPLA6Q8IY17 1366 aa28.76■■■□□ 2.2
SLC48A1-207ENST00000549243 NUTM2FA1L443 756 aa28.75■■■□□ 2.19
SLC48A1-207ENST00000549243 ESCO1Q5FWF5 840 aa28.73■■■□□ 2.19
SLC48A1-207ENST00000549243 HRCP23327 699 aa28.71■■■□□ 2.19
SLC48A1-207ENST00000549243 ZNF772Q68DY9 489 aaPredicted RBP28.71■■■□□ 2.19
SLC48A1-207ENST00000549243 FMN2Q9NZ56 1722 aa28.71■■■□□ 2.19
SLC48A1-207ENST00000549243 SOS2Q07890 1332 aaPredicted RBP28.7■■■□□ 2.19
SLC48A1-207ENST00000549243 DHX57Q6P158 1386 aaKnown RBP28.7■■■□□ 2.18
SLC48A1-207ENST00000549243 KDM2AQ9Y2K7 1162 aa28.69■■■□□ 2.18
SLC48A1-207ENST00000549243 DCAF11Q8TEB1 546 aa28.67■■■□□ 2.18
SLC48A1-207ENST00000549243 RGPD8O14715 1765 aaPredicted RBP28.67■■■□□ 2.18
SLC48A1-207ENST00000549243 AFF2P51816 1311 aa28.67■■■□□ 2.18
SLC48A1-207ENST00000549243 XPCQ01831 940 aaPredicted RBP28.65■■■□□ 2.18
SLC48A1-207ENST00000549243 SAFB2Q14151 953 aaKnown RBP eCLIP28.65■■■□□ 2.18
SLC48A1-207ENST00000549243 C8orf37Q96NL8 207 aa28.65■■■□□ 2.18
SLC48A1-207ENST00000549243 FOXO3O43524 673 aa28.64■■■□□ 2.18
SLC48A1-207ENST00000549243 SIRT1Q96EB6 747 aa28.64■■■□□ 2.18
SLC48A1-207ENST00000549243 NPHP3Q7Z494 1330 aa28.64■■■□□ 2.17
SLC48A1-207ENST00000549243 ADAMTS2O95450 1211 aa28.63■■■□□ 2.17
SLC48A1-207ENST00000549243 PXDNQ92626 1479 aa28.62■■■□□ 2.17
SLC48A1-207ENST00000549243 PRAM1Q96QH2 718 aa28.62■■■□□ 2.17
SLC48A1-207ENST00000549243 ADGRB1O14514 1584 aa28.61■■■□□ 2.17
SLC48A1-207ENST00000549243 COL22A1Q8NFW1 1626 aaPredicted RBP28.59■■■□□ 2.17
SLC48A1-207ENST00000549243 KIF1AQ12756 1690 aa28.59■■■□□ 2.17
SLC48A1-207ENST00000549243 DLC1Q96QB1 1528 aa28.59■■■□□ 2.17
SLC48A1-207ENST00000549243 POGKQ9P215 609 aa28.58■■■□□ 2.17
SLC48A1-207ENST00000549243 RXRBP28702 533 aa28.57■■■□□ 2.16
SLC48A1-207ENST00000549243 TRAK1Q9UPV9 953 aa28.57■■■□□ 2.16
SLC48A1-207ENST00000549243 NGLY1Q96IV0 654 aa28.56■■■□□ 2.16
SLC48A1-207ENST00000549243 QTRT2Q9H974 415 aaKnown RBP28.51■■■□□ 2.15
SLC48A1-207ENST00000549243 MARF1Q9Y4F3 1742 aaKnown RBP28.5■■■□□ 2.15
SLC48A1-207ENST00000549243 STAC3Q96MF2 364 aa28.5■■■□□ 2.15
SLC48A1-207ENST00000549243 HIRIP3Q9BW71 556 aaPredicted RBP28.5■■■□□ 2.15
SLC48A1-207ENST00000549243 PHF8Q9UPP1 1060 aa28.5■■■□□ 2.15
SLC48A1-207ENST00000549243 ADGRB2O60241 1585 aa28.5■■■□□ 2.15
SLC48A1-207ENST00000549243 USP32Q8NFA0 1604 aa28.49■■■□□ 2.15
SLC48A1-207ENST00000549243 MINK1Q8N4C8 1332 aaPredicted RBP28.48■■■□□ 2.15
SLC48A1-207ENST00000549243 KRT28Q7Z3Y7 464 aa28.48■■■□□ 2.15
SLC48A1-207ENST00000549243 ARHGEF28Q8N1W1 1705 aaKnown RBP28.46■■■□□ 2.15
SLC48A1-207ENST00000549243 SPATA31A3Q5VYP0 1347 aa28.45■■■□□ 2.15
SLC48A1-207ENST00000549243 USP21Q9UK80 565 aa28.45■■■□□ 2.14
SLC48A1-207ENST00000549243 CDK12Q9NYV4 1490 aaPredicted RBP28.45■■■□□ 2.14
SLC48A1-207ENST00000549243 RBM6P78332 1123 aaKnown RBP28.43■■■□□ 2.14
SLC48A1-207ENST00000549243 PMFBP1Q8TBY8 1022 aa28.43■■■□□ 2.14
SLC48A1-207ENST00000549243 ANKARQ7Z5J8 1434 aa28.42■■■□□ 2.14
SLC48A1-207ENST00000549243 RGS12O14924 1447 aa28.41■■■□□ 2.14
SLC48A1-207ENST00000549243 PLEKHG5O94827 1062 aa28.4■■■□□ 2.14
SLC48A1-207ENST00000549243 FNBP4Q8N3X1 1017 aaPredicted RBP28.4■■■□□ 2.14
SLC48A1-207ENST00000549243 PSME1Q06323 249 aa28.39■■■□□ 2.14
SLC48A1-207ENST00000549243 TNS3Q68CZ2 1445 aa28.39■■■□□ 2.14
SLC48A1-207ENST00000549243 KIAA1210Q9ULL0 1709 aa28.39■■■□□ 2.14
SLC48A1-207ENST00000549243 LMOD2Q6P5Q4 547 aa28.38■■■□□ 2.13
SLC48A1-207ENST00000549243 TRPC5Q9UL62 973 aaPredicted RBP28.37■■■□□ 2.13
SLC48A1-207ENST00000549243 TULP4Q9NRJ4 1543 aa28.37■■■□□ 2.13
SLC48A1-207ENST00000549243 PRR36Q9H6K5 1346 aa28.37■■■□□ 2.13
SLC48A1-207ENST00000549243 WASLO00401 505 aaPredicted RBP28.36■■■□□ 2.13
SLC48A1-207ENST00000549243 UPF1Q92900 1129 aaKnown RBP eCLIP28.36■■■□□ 2.13
SLC48A1-207ENST00000549243 EIF3AQ14152 1382 aaKnown RBP28.35■■■□□ 2.13
SLC48A1-207ENST00000549243 CABLES1Q8TDN4 633 aa28.34■■■□□ 2.13
SLC48A1-207ENST00000549243 SBNO1A3KN83 1393 aa28.34■■■□□ 2.13
SLC48A1-207ENST00000549243 ATRNO75882 1429 aa28.34■■■□□ 2.13
SLC48A1-207ENST00000549243 BCL9LQ86UU0 1499 aa28.34■■■□□ 2.13
SLC48A1-207ENST00000549243 ABCA3Q99758 1704 aa28.33■■■□□ 2.13
SLC48A1-207ENST00000549243 HAP1P54257 671 aaPredicted RBP28.33■■■□□ 2.13
SLC48A1-207ENST00000549243 TRPM3Q9HCF6 1732 aaPredicted RBP28.32■■■□□ 2.12
SLC48A1-207ENST00000549243 NBPF1Q3BBV0 1214 aa28.31■■■□□ 2.12
SLC48A1-207ENST00000549243 ITSN1Q15811 1721 aa28.31■■■□□ 2.12
SLC48A1-207ENST00000549243 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.29■■■□□ 2.12
SLC48A1-207ENST00000549243 ARHGEF10O15013 1369 aa28.29■■■□□ 2.12
SLC48A1-207ENST00000549243 GPRASP1Q5JY77 1395 aa28.27■■■□□ 2.12
SLC48A1-207ENST00000549243 SIN3AQ96ST3 1273 aa28.27■■■□□ 2.12
SLC48A1-207ENST00000549243 ALS2Q96Q42 1657 aa28.26■■■□□ 2.12
SLC48A1-207ENST00000549243 NGDNQ8NEJ9 315 aaKnown RBP28.26■■■□□ 2.11
SLC48A1-207ENST00000549243 SLIT2O94813 1529 aa28.26■■■□□ 2.11
SLC48A1-207ENST00000549243 ATP7BP35670 1465 aa28.26■■■□□ 2.11
SLC48A1-207ENST00000549243 PLCH1Q4KWH8 1693 aa28.26■■■□□ 2.11
SLC48A1-207ENST00000549243 L3MBTL2Q969R5 705 aa28.24■■■□□ 2.11
SLC48A1-207ENST00000549243 NUDT16Q96DE0 195 aaKnown RBP28.24■■■□□ 2.11
SLC48A1-207ENST00000549243 CDK19Q9BWU1 502 aa28.24■■■□□ 2.11
SLC48A1-207ENST00000549243 NEUROD1Q13562 356 aa28.23■■■□□ 2.11
SLC48A1-207ENST00000549243 UNC5CLQ8IV45 518 aa28.23■■■□□ 2.11
SLC48A1-207ENST00000549243 GJD4Q96KN9 370 aaPredicted RBP28.22■■■□□ 2.11
SLC48A1-207ENST00000549243 PAK3O75914 559 aaPredicted RBP28.2■■■□□ 2.1
SLC48A1-207ENST00000549243 TOPAZ1Q8N9V7 1692 aa28.19■■■□□ 2.1
SLC48A1-207ENST00000549243 NWD2Q9ULI1 1742 aa28.19■■■□□ 2.1
SLC48A1-207ENST00000549243 GLI3P10071 1580 aa28.19■■■□□ 2.1
SLC48A1-207ENST00000549243 QRICH2Q9H0J4 1663 aa28.18■■■□□ 2.1
SLC48A1-207ENST00000549243 RALGAPBQ86X10 1494 aa28.17■■■□□ 2.1
SLC48A1-207ENST00000549243 ATAD2Q6PL18 1390 aa28.16■■■□□ 2.1
SLC48A1-207ENST00000549243 TRPM1Q7Z4N2 1603 aa28.16■■■□□ 2.1
SLC48A1-207ENST00000549243 CENPJQ9HC77 1338 aaPredicted RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms