RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
ARFGAP1-221ENST00000549047 LRRC59Q96AG4 307 aaKnown RBP22.24■■□□□ 1.15
ARFGAP1-221ENST00000549047 SHPRHQ149N8 1683 aa22.23■■□□□ 1.15
ARFGAP1-221ENST00000549047 POTEAQ6S8J7 498 aa22.23■■□□□ 1.15
ARFGAP1-221ENST00000549047 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
ARFGAP1-221ENST00000549047 MEX3CQ5U5Q3 659 aaKnown RBP22.22■■□□□ 1.15
ARFGAP1-221ENST00000549047 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
ARFGAP1-221ENST00000549047 SIRT1Q96EB6 747 aa22.22■■□□□ 1.15
ARFGAP1-221ENST00000549047 KNDC1Q76NI1 1749 aa22.22■■□□□ 1.15
ARFGAP1-221ENST00000549047 LAMC1P11047 1609 aa22.21■■□□□ 1.15
ARFGAP1-221ENST00000549047 KDM2AQ9Y2K7 1162 aa22.21■■□□□ 1.15
ARFGAP1-221ENST00000549047 NUTM2BA6NNL0 878 aaPredicted RBP22.2■■□□□ 1.14
ARFGAP1-221ENST00000549047 NUTM2EB1AL46 878 aaPredicted RBP22.2■■□□□ 1.14
ARFGAP1-221ENST00000549047 NUTM2AQ8IVF1 878 aaPredicted RBP22.2■■□□□ 1.14
ARFGAP1-221ENST00000549047 ESCO1Q5FWF5 840 aa22.19■■□□□ 1.14
ARFGAP1-221ENST00000549047 PNPLA6Q8IY17 1366 aa22.18■■□□□ 1.14
ARFGAP1-221ENST00000549047 SOS2Q07890 1332 aaPredicted RBP22.18■■□□□ 1.14
ARFGAP1-221ENST00000549047 NUTM2FA1L443 756 aa22.17■■□□□ 1.14
ARFGAP1-221ENST00000549047 STAC3Q96MF2 364 aa22.17■■□□□ 1.14
ARFGAP1-221ENST00000549047 PRAM1Q96QH2 718 aa22.16■■□□□ 1.14
ARFGAP1-221ENST00000549047 ADGRB1O14514 1584 aa22.15■■□□□ 1.14
ARFGAP1-221ENST00000549047 NPHP3Q7Z494 1330 aa22.14■■□□□ 1.14
ARFGAP1-221ENST00000549047 SAFB2Q14151 953 aaKnown RBP eCLIP22.14■■□□□ 1.13
ARFGAP1-221ENST00000549047 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
ARFGAP1-221ENST00000549047 FOXO3O43524 673 aa22.12■■□□□ 1.13
ARFGAP1-221ENST00000549047 POGKQ9P215 609 aa22.12■■□□□ 1.13
ARFGAP1-221ENST00000549047 ZNF772Q68DY9 489 aaPredicted RBP22.11■■□□□ 1.13
ARFGAP1-221ENST00000549047 TRAK1Q9UPV9 953 aa22.11■■□□□ 1.13
ARFGAP1-221ENST00000549047 XPCQ01831 940 aaPredicted RBP22.09■■□□□ 1.13
ARFGAP1-221ENST00000549047 PXDNQ92626 1479 aa22.09■■□□□ 1.13
ARFGAP1-221ENST00000549047 FMN2Q9NZ56 1722 aa22.09■■□□□ 1.13
ARFGAP1-221ENST00000549047 C8orf37Q96NL8 207 aa22.07■■□□□ 1.12
ARFGAP1-221ENST00000549047 AFF2P51816 1311 aa22.06■■□□□ 1.12
ARFGAP1-221ENST00000549047 ADAMTS2O95450 1211 aa22.06■■□□□ 1.12
ARFGAP1-221ENST00000549047 HIRIP3Q9BW71 556 aaPredicted RBP22.03■■□□□ 1.12
ARFGAP1-221ENST00000549047 PHF8Q9UPP1 1060 aa22.03■■□□□ 1.12
ARFGAP1-221ENST00000549047 MINK1Q8N4C8 1332 aaPredicted RBP22.03■■□□□ 1.12
ARFGAP1-221ENST00000549047 ADGRB2O60241 1585 aa22.01■■□□□ 1.11
ARFGAP1-221ENST00000549047 KIF1AQ12756 1690 aa22.01■■□□□ 1.11
ARFGAP1-221ENST00000549047 ANKARQ7Z5J8 1434 aa22■■□□□ 1.11
ARFGAP1-221ENST00000549047 NGLY1Q96IV0 654 aa22■■□□□ 1.11
ARFGAP1-221ENST00000549047 COL22A1Q8NFW1 1626 aaPredicted RBP21.99■■□□□ 1.11
ARFGAP1-221ENST00000549047 RXRBP28702 533 aa21.99■■□□□ 1.11
ARFGAP1-221ENST00000549047 KRT28Q7Z3Y7 464 aa21.99■■□□□ 1.11
ARFGAP1-221ENST00000549047 SPATA31A3Q5VYP0 1347 aa21.98■■□□□ 1.11
ARFGAP1-221ENST00000549047 EIF3AQ14152 1382 aaKnown RBP21.97■■□□□ 1.11
ARFGAP1-221ENST00000549047 WASLO00401 505 aaPredicted RBP21.96■■□□□ 1.11
ARFGAP1-221ENST00000549047 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
ARFGAP1-221ENST00000549047 PSME1Q06323 249 aa21.95■■□□□ 1.1
ARFGAP1-221ENST00000549047 NBPF1Q3BBV0 1214 aa21.95■■□□□ 1.1
ARFGAP1-221ENST00000549047 PMFBP1Q8TBY8 1022 aa21.95■■□□□ 1.1
ARFGAP1-221ENST00000549047 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
ARFGAP1-221ENST00000549047 USP32Q8NFA0 1604 aa21.95■■□□□ 1.1
ARFGAP1-221ENST00000549047 L3MBTL2Q969R5 705 aa21.94■■□□□ 1.1
ARFGAP1-221ENST00000549047 PRR36Q9H6K5 1346 aa21.94■■□□□ 1.1
ARFGAP1-221ENST00000549047 TULP4Q9NRJ4 1543 aa21.94■■□□□ 1.1
ARFGAP1-221ENST00000549047 TNS3Q68CZ2 1445 aa21.93■■□□□ 1.1
ARFGAP1-221ENST00000549047 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
ARFGAP1-221ENST00000549047 ARHGEF28Q8N1W1 1705 aaKnown RBP21.92■■□□□ 1.1
ARFGAP1-221ENST00000549047 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
ARFGAP1-221ENST00000549047 SBNO1A3KN83 1393 aa21.92■■□□□ 1.1
ARFGAP1-221ENST00000549047 FNBP4Q8N3X1 1017 aaPredicted RBP21.92■■□□□ 1.1
ARFGAP1-221ENST00000549047 USP21Q9UK80 565 aa21.92■■□□□ 1.1
ARFGAP1-221ENST00000549047 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
ARFGAP1-221ENST00000549047 CDK12Q9NYV4 1490 aaPredicted RBP21.9■■□□□ 1.1
ARFGAP1-221ENST00000549047 RBM6P78332 1123 aaKnown RBP21.9■■□□□ 1.1
ARFGAP1-221ENST00000549047 LMOD2Q6P5Q4 547 aa21.88■■□□□ 1.09
ARFGAP1-221ENST00000549047 ARHGEF10O15013 1369 aa21.87■■□□□ 1.09
ARFGAP1-221ENST00000549047 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
ARFGAP1-221ENST00000549047 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
ARFGAP1-221ENST00000549047 ATP7BP35670 1465 aa21.86■■□□□ 1.09
ARFGAP1-221ENST00000549047 CABLES1Q8TDN4 633 aa21.86■■□□□ 1.09
ARFGAP1-221ENST00000549047 NUDT16Q96DE0 195 aaKnown RBP21.86■■□□□ 1.09
ARFGAP1-221ENST00000549047 CDK19Q9BWU1 502 aa21.86■■□□□ 1.09
ARFGAP1-221ENST00000549047 PLEKHG5O94827 1062 aa21.85■■□□□ 1.09
ARFGAP1-221ENST00000549047 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
ARFGAP1-221ENST00000549047 NGDNQ8NEJ9 315 aaKnown RBP21.85■■□□□ 1.09
ARFGAP1-221ENST00000549047 RGS12O14924 1447 aa21.85■■□□□ 1.09
ARFGAP1-221ENST00000549047 BCL9LQ86UU0 1499 aa21.84■■□□□ 1.09
ARFGAP1-221ENST00000549047 ATRNO75882 1429 aa21.84■■□□□ 1.09
ARFGAP1-221ENST00000549047 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
ARFGAP1-221ENST00000549047 CENPJQ9HC77 1338 aaPredicted RBP21.83■■□□□ 1.09
ARFGAP1-221ENST00000549047 SLIT2O94813 1529 aa21.8■■□□□ 1.08
ARFGAP1-221ENST00000549047 UPF1Q92900 1129 aaKnown RBP eCLIP21.79■■□□□ 1.08
ARFGAP1-221ENST00000549047 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
ARFGAP1-221ENST00000549047 TRPM3Q9HCF6 1732 aaPredicted RBP21.79■■□□□ 1.08
ARFGAP1-221ENST00000549047 MARF1Q9Y4F3 1742 aaKnown RBP21.79■■□□□ 1.08
ARFGAP1-221ENST00000549047 PAK3O75914 559 aaPredicted RBP21.78■■□□□ 1.08
ARFGAP1-221ENST00000549047 UNC5CLQ8IV45 518 aa21.78■■□□□ 1.08
ARFGAP1-221ENST00000549047 ROCK2O75116 1388 aaKnown RBP21.77■■□□□ 1.08
ARFGAP1-221ENST00000549047 SRPK2P78362 688 aaKnown RBP21.76■■□□□ 1.07
ARFGAP1-221ENST00000549047 ITSN1Q15811 1721 aa21.76■■□□□ 1.07
ARFGAP1-221ENST00000549047 GJD4Q96KN9 370 aaPredicted RBP21.76■■□□□ 1.07
ARFGAP1-221ENST00000549047 TRPM1Q7Z4N2 1603 aa21.76■■□□□ 1.07
ARFGAP1-221ENST00000549047 POLR3AO14802 1390 aaPredicted RBP21.75■■□□□ 1.07
ARFGAP1-221ENST00000549047 PLEKHG3A1L390 1219 aa21.75■■□□□ 1.07
ARFGAP1-221ENST00000549047 ALS2Q96Q42 1657 aa21.75■■□□□ 1.07
ARFGAP1-221ENST00000549047 ACEP12821 1306 aa21.75■■□□□ 1.07
ARFGAP1-221ENST00000549047 NBPF8Q3BBV2 869 aa21.74■■□□□ 1.07
ARFGAP1-221ENST00000549047 CABP2Q9NPB3 220 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms