RNA–Protein interactions for RNA: ENST00000548909.5

ERGIC2-206, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-206ENST00000548909 TPRNQ4KMQ1 711 aa13.06□□□□□ -0.32
ERGIC2-206ENST00000548909 SNRPBP14678 240 aaKnown RBP13.04□□□□□ -0.32
ERGIC2-206ENST00000548909 FUT2Q10981 343 aa13.04□□□□□ -0.32
ERGIC2-206ENST00000548909 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
ERGIC2-206ENST00000548909 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
ERGIC2-206ENST00000548909 BRICD5Q6PL45 260 aa13.03□□□□□ -0.32
ERGIC2-206ENST00000548909 SLC27A5Q9Y2P5 690 aa13.03□□□□□ -0.32
ERGIC2-206ENST00000548909 HIC1Q14526 733 aa13.02□□□□□ -0.33
ERGIC2-206ENST00000548909 KIFC2Q96AC6 838 aa13.02□□□□□ -0.33
ERGIC2-206ENST00000548909 RDH13Q8NBN7 331 aa12.99□□□□□ -0.33
ERGIC2-206ENST00000548909 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
ERGIC2-206ENST00000548909 FAM181BA6NEQ2 426 aa12.98□□□□□ -0.33
ERGIC2-206ENST00000548909 GCGRP47871 477 aa12.98□□□□□ -0.33
ERGIC2-206ENST00000548909 TRIM32Q13049 653 aa12.96□□□□□ -0.33
ERGIC2-206ENST00000548909 MRGPRX2Q96LB1 330 aa12.95□□□□□ -0.34
ERGIC2-206ENST00000548909 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
ERGIC2-206ENST00000548909 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
ERGIC2-206ENST00000548909 J3QL48 77 aa12.93□□□□□ -0.34
ERGIC2-206ENST00000548909 MMP16P51512 607 aa12.93□□□□□ -0.34
ERGIC2-206ENST00000548909 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
ERGIC2-206ENST00000548909 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
ERGIC2-206ENST00000548909 LOC100996750A0A140TA64 210 aa12.91□□□□□ -0.34
ERGIC2-206ENST00000548909 SEMA3EO15041 775 aa12.91□□□□□ -0.34
ERGIC2-206ENST00000548909 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
ERGIC2-206ENST00000548909 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
ERGIC2-206ENST00000548909 KRTAP4-6Q9BYQ5 205 aa12.91□□□□□ -0.34
ERGIC2-206ENST00000548909 FECHP22830 423 aa12.9□□□□□ -0.34
ERGIC2-206ENST00000548909 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
ERGIC2-206ENST00000548909 HPS1Q92902 700 aa12.9□□□□□ -0.34
ERGIC2-206ENST00000548909 NPAS3Q8IXF0 933 aa12.89□□□□□ -0.35
ERGIC2-206ENST00000548909 Q3C1V9 767 aa12.88□□□□□ -0.35
ERGIC2-206ENST00000548909 GNPATO15228 680 aa12.87□□□□□ -0.35
ERGIC2-206ENST00000548909 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
ERGIC2-206ENST00000548909 LORP23490 312 aaPredicted RBP12.85□□□□□ -0.35
ERGIC2-206ENST00000548909 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
ERGIC2-206ENST00000548909 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
ERGIC2-206ENST00000548909 WNT7BP56706 349 aa12.83□□□□□ -0.36
ERGIC2-206ENST00000548909 ZSCAN1Q8NBB4 408 aa12.83□□□□□ -0.36
ERGIC2-206ENST00000548909 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
ERGIC2-206ENST00000548909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.82□□□□□ -0.36
ERGIC2-206ENST00000548909 GMPRP36959 345 aa12.81□□□□□ -0.36
ERGIC2-206ENST00000548909 IRF7Q92985 503 aa12.81□□□□□ -0.36
ERGIC2-206ENST00000548909 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
ERGIC2-206ENST00000548909 USB1Q9BQ65 265 aaKnown RBP12.79□□□□□ -0.36
ERGIC2-206ENST00000548909 GPR37O15354 613 aa12.78□□□□□ -0.36
ERGIC2-206ENST00000548909 SKOR1P84550 965 aa12.78□□□□□ -0.36
ERGIC2-206ENST00000548909 PHOX2BQ99453 314 aa12.77□□□□□ -0.37
ERGIC2-206ENST00000548909 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
ERGIC2-206ENST00000548909 H3BM21 787 aa12.74□□□□□ -0.37
ERGIC2-206ENST00000548909 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
ERGIC2-206ENST00000548909 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
ERGIC2-206ENST00000548909 TRIM46Q7Z4K8 759 aa12.71□□□□□ -0.37
ERGIC2-206ENST00000548909 SIAH2O43255 324 aa12.7□□□□□ -0.38
ERGIC2-206ENST00000548909 CD46P15529 392 aa12.7□□□□□ -0.38
ERGIC2-206ENST00000548909 CCDC24Q8N4L8 307 aa12.69□□□□□ -0.38
ERGIC2-206ENST00000548909 CAPN5O15484 640 aaPredicted RBP12.67□□□□□ -0.38
ERGIC2-206ENST00000548909 KDM4AO75164 1064 aa12.67□□□□□ -0.38
ERGIC2-206ENST00000548909 USP46P62068 366 aa12.67□□□□□ -0.38
ERGIC2-206ENST00000548909 BMP1P13497 986 aa12.65□□□□□ -0.38
ERGIC2-206ENST00000548909 ERBB4Q15303 1308 aa12.64□□□□□ -0.39
ERGIC2-206ENST00000548909 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
ERGIC2-206ENST00000548909 JUNDP17535 347 aa12.62□□□□□ -0.39
ERGIC2-206ENST00000548909 EHBP1Q8NDI1 1231 aa12.62□□□□□ -0.39
ERGIC2-206ENST00000548909 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
ERGIC2-206ENST00000548909 VEGFBP49765 207 aa12.61□□□□□ -0.39
ERGIC2-206ENST00000548909 SUZ12Q15022 739 aaKnown RBP12.6□□□□□ -0.39
ERGIC2-206ENST00000548909 GPIHBP1Q8IV16 184 aa12.6□□□□□ -0.39
ERGIC2-206ENST00000548909 VSIG8P0DPA2 414 aa12.58□□□□□ -0.4
ERGIC2-206ENST00000548909 ZFP42Q96MM3 310 aa12.58□□□□□ -0.4
ERGIC2-206ENST00000548909 HOXA2O43364 376 aa12.57□□□□□ -0.4
ERGIC2-206ENST00000548909 PTCRAQ6ISU1 281 aaPredicted RBP12.55□□□□□ -0.4
ERGIC2-206ENST00000548909 HLA-CQ95604 372 aa12.55□□□□□ -0.4
ERGIC2-206ENST00000548909 NUDT12Q9BQG2 462 aa12.55□□□□□ -0.4
ERGIC2-206ENST00000548909 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
ERGIC2-206ENST00000548909 MPNDQ8N594 471 aa12.53□□□□□ -0.4
ERGIC2-206ENST00000548909 SH3BP2P78314 561 aa12.52□□□□□ -0.41
ERGIC2-206ENST00000548909 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
ERGIC2-206ENST00000548909 ZMYND10O75800 440 aa12.5□□□□□ -0.41
ERGIC2-206ENST00000548909 MRPL14Q6P1L8 145 aaKnown RBP12.49□□□□□ -0.41
ERGIC2-206ENST00000548909 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
ERGIC2-206ENST00000548909 SLC24A3Q9HC58 644 aa12.49□□□□□ -0.41
ERGIC2-206ENST00000548909 PLEKHG3A1L390 1219 aa12.48□□□□□ -0.41
ERGIC2-206ENST00000548909 SCARF1Q14162 830 aa12.48□□□□□ -0.41
ERGIC2-206ENST00000548909 GSK3AP49840 483 aa12.47□□□□□ -0.41
ERGIC2-206ENST00000548909 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
ERGIC2-206ENST00000548909 BARGINQ6ZT62 677 aa12.46□□□□□ -0.41
ERGIC2-206ENST00000548909 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.41
ERGIC2-206ENST00000548909 CCNYL3P0C7X3 344 aa12.45□□□□□ -0.42
ERGIC2-206ENST00000548909 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
ERGIC2-206ENST00000548909 VARSP26640 1264 aaKnown RBP12.44□□□□□ -0.42
ERGIC2-206ENST00000548909 NNTQ13423 1086 aa12.43□□□□□ -0.42
ERGIC2-206ENST00000548909 MS4A1P11836 297 aa12.42□□□□□ -0.42
ERGIC2-206ENST00000548909 PTPRNQ16849 979 aa12.42□□□□□ -0.42
ERGIC2-206ENST00000548909 EVA1BQ9NVM1 165 aa12.42□□□□□ -0.42
ERGIC2-206ENST00000548909 ADH1CP00326 375 aa12.41□□□□□ -0.42
ERGIC2-206ENST00000548909 TIMP2P16035 220 aa12.41□□□□□ -0.42
ERGIC2-206ENST00000548909 MDM2Q00987 491 aaPredicted RBP12.41□□□□□ -0.42
ERGIC2-206ENST00000548909 KCTD17Q8N5Z5 321 aa12.41□□□□□ -0.42
ERGIC2-206ENST00000548909 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
ERGIC2-206ENST00000548909 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms