RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
CNOT2-215ENST00000548863 CLCN1P35523 988 aa12.24□□□□□ -0.45
CNOT2-215ENST00000548863 USB1Q9BQ65 265 aaKnown RBP12.23□□□□□ -0.45
CNOT2-215ENST00000548863 TOR4AQ9NXH8 423 aa12.23□□□□□ -0.45
CNOT2-215ENST00000548863 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-215ENST00000548863 FOXC1Q12948 553 aa12.22□□□□□ -0.45
CNOT2-215ENST00000548863 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
CNOT2-215ENST00000548863 HOXA2O43364 376 aa12.21□□□□□ -0.45
CNOT2-215ENST00000548863 CRIPAKQ8N1N5 446 aa12.21□□□□□ -0.45
CNOT2-215ENST00000548863 DXOO77932 396 aaKnown RBP12.2□□□□□ -0.46
CNOT2-215ENST00000548863 AVPP01185 164 aa12.19□□□□□ -0.46
CNOT2-215ENST00000548863 AAASQ9NRG9 546 aa12.18□□□□□ -0.46
CNOT2-215ENST00000548863 WNT7AO00755 349 aa12.16□□□□□ -0.46
CNOT2-215ENST00000548863 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
CNOT2-215ENST00000548863 HLA-CQ95604 372 aa12.16□□□□□ -0.46
CNOT2-215ENST00000548863 TRIM32Q13049 653 aa12.15□□□□□ -0.46
CNOT2-215ENST00000548863 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
CNOT2-215ENST00000548863 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
CNOT2-215ENST00000548863 KRI1Q8N9T8 703 aaKnown RBP12.14□□□□□ -0.47
CNOT2-215ENST00000548863 ZMYND10O75800 440 aa12.13□□□□□ -0.47
CNOT2-215ENST00000548863 POTECB2RU33 542 aa12.12□□□□□ -0.47
CNOT2-215ENST00000548863 CTC1Q2NKJ3 1217 aa12.12□□□□□ -0.47
CNOT2-215ENST00000548863 NUTM1Q86Y26 1132 aa12.12□□□□□ -0.47
CNOT2-215ENST00000548863 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
CNOT2-215ENST00000548863 ST8SIA5O15466 376 aa12.11□□□□□ -0.47
CNOT2-215ENST00000548863 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
CNOT2-215ENST00000548863 SNIP1Q8TAD8 396 aaKnown RBP12.1□□□□□ -0.47
CNOT2-215ENST00000548863 SSTR3P32745 418 aaPredicted RBP12.09□□□□□ -0.47
CNOT2-215ENST00000548863 AMHR2Q16671 573 aa12.09□□□□□ -0.47
CNOT2-215ENST00000548863 RETREG3Q86VR2 466 aa12.09□□□□□ -0.47
CNOT2-215ENST00000548863 JUNDP17535 347 aa12.08□□□□□ -0.48
CNOT2-215ENST00000548863 GUCA2AQ02747 115 aa12.08□□□□□ -0.48
CNOT2-215ENST00000548863 TTC24A2A3L6 582 aaPredicted RBP12.07□□□□□ -0.48
CNOT2-215ENST00000548863 WNT7BP56706 349 aa12.07□□□□□ -0.48
CNOT2-215ENST00000548863 AXIN1O15169 862 aa12.06□□□□□ -0.48
CNOT2-215ENST00000548863 ZC3H15Q8WU90 426 aaKnown RBP12.06□□□□□ -0.48
CNOT2-215ENST00000548863 MRGPRX2Q96LB1 330 aa12.06□□□□□ -0.48
CNOT2-215ENST00000548863 FDX1P10109 184 aa12.05□□□□□ -0.48
CNOT2-215ENST00000548863 SMPD1P17405 629 aa12.05□□□□□ -0.48
CNOT2-215ENST00000548863 SYMPKQ92797 1274 aaKnown RBP12.05□□□□□ -0.48
CNOT2-215ENST00000548863 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
CNOT2-215ENST00000548863 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
CNOT2-215ENST00000548863 SPIRE2Q8WWL2 714 aa12.04□□□□□ -0.48
CNOT2-215ENST00000548863 SKOR1P84550 965 aa12.02□□□□□ -0.49
CNOT2-215ENST00000548863 DACH1Q9UI36 760 aa12.02□□□□□ -0.49
CNOT2-215ENST00000548863 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
CNOT2-215ENST00000548863 NUDT12Q9BQG2 462 aa12.01□□□□□ -0.49
CNOT2-215ENST00000548863 GJA5P36382 358 aa12□□□□□ -0.49
CNOT2-215ENST00000548863 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
CNOT2-215ENST00000548863 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
CNOT2-215ENST00000548863 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
CNOT2-215ENST00000548863 J3QL48 77 aa11.98□□□□□ -0.49
CNOT2-215ENST00000548863 MOXD2PA6NHM9 499 aa11.97□□□□□ -0.49
CNOT2-215ENST00000548863 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
CNOT2-215ENST00000548863 DESI1Q6ICB0 168 aa11.97□□□□□ -0.49
CNOT2-215ENST00000548863 PTCRAQ6ISU1 281 aaPredicted RBP11.97□□□□□ -0.49
CNOT2-215ENST00000548863 MS4A1P11836 297 aa11.96□□□□□ -0.49
CNOT2-215ENST00000548863 NDUFV2P19404 249 aa11.96□□□□□ -0.49
CNOT2-215ENST00000548863 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
CNOT2-215ENST00000548863 PTPRNQ16849 979 aa11.96□□□□□ -0.49
CNOT2-215ENST00000548863 GMPR2Q9P2T1 348 aaKnown RBP11.96□□□□□ -0.49
CNOT2-215ENST00000548863 CCNYL3P0C7X3 344 aa11.95□□□□□ -0.5
CNOT2-215ENST00000548863 LCE2AQ5TA79 106 aaPredicted RBP11.95□□□□□ -0.5
CNOT2-215ENST00000548863 BEGAINQ9BUH8 593 aa11.94□□□□□ -0.5
CNOT2-215ENST00000548863 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
CNOT2-215ENST00000548863 C11orf95C9JLR9 678 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-215ENST00000548863 SIAH2O43255 324 aa11.93□□□□□ -0.5
CNOT2-215ENST00000548863 MTMR2Q13614 643 aa11.93□□□□□ -0.5
CNOT2-215ENST00000548863 TREML4Q6UXN2 200 aa11.93□□□□□ -0.5
CNOT2-215ENST00000548863 HPS1Q92902 700 aa11.92□□□□□ -0.5
CNOT2-215ENST00000548863 TRIM66O15016 1216 aa11.91□□□□□ -0.5
CNOT2-215ENST00000548863 PARP9Q8IXQ6 854 aa11.91□□□□□ -0.5
CNOT2-215ENST00000548863 PRR7Q8TB68 274 aa11.91□□□□□ -0.5
CNOT2-215ENST00000548863 ATP13A2Q9NQ11 1180 aa11.91□□□□□ -0.5
CNOT2-215ENST00000548863 AK7Q96M32 723 aa11.9□□□□□ -0.5
CNOT2-215ENST00000548863 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
CNOT2-215ENST00000548863 SH3BP2P78314 561 aa11.88□□□□□ -0.51
CNOT2-215ENST00000548863 KCNH2Q12809 1159 aa11.88□□□□□ -0.51
CNOT2-215ENST00000548863 RSBN1LQ6PCB5 846 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-215ENST00000548863 EHBP1Q8NDI1 1231 aa11.88□□□□□ -0.51
CNOT2-215ENST00000548863 SENP2Q9HC62 589 aa11.88□□□□□ -0.51
CNOT2-215ENST00000548863 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
CNOT2-215ENST00000548863 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
CNOT2-215ENST00000548863 SPTLC1O15269 473 aa11.86□□□□□ -0.51
CNOT2-215ENST00000548863 TRIM47Q96LD4 638 aa11.86□□□□□ -0.51
CNOT2-215ENST00000548863 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
CNOT2-215ENST00000548863 LYPD8Q6UX82 237 aa11.84□□□□□ -0.51
CNOT2-215ENST00000548863 MPNDQ8N594 471 aa11.84□□□□□ -0.51
CNOT2-215ENST00000548863 KIFC2Q96AC6 838 aa11.83□□□□□ -0.52
CNOT2-215ENST00000548863 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
CNOT2-215ENST00000548863 BAP1Q92560 729 aa11.82□□□□□ -0.52
CNOT2-215ENST00000548863 SNRPBP14678 240 aaKnown RBP11.81□□□□□ -0.52
CNOT2-215ENST00000548863 VARSP26640 1264 aaKnown RBP11.81□□□□□ -0.52
CNOT2-215ENST00000548863 NFX1Q12986 1120 aaKnown RBP11.81□□□□□ -0.52
CNOT2-215ENST00000548863 ZNF511Q8NB15 262 aa11.81□□□□□ -0.52
CNOT2-215ENST00000548863 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
CNOT2-215ENST00000548863 WFS1O76024 890 aa11.8□□□□□ -0.52
CNOT2-215ENST00000548863 HRCP23327 699 aa11.8□□□□□ -0.52
CNOT2-215ENST00000548863 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
CNOT2-215ENST00000548863 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms